Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358436

Identifier: 78358436

GI number: 78358436

Start: 3360762

End: 3361904

Strand: Direct

Name: 78358436

Synonym: Dde_3396

Alternate gene names: NA

Gene position: 3360762-3361904 (Clockwise)

Preceding gene: 78358435

Following gene: 78358437

Centisome position: 90.1

GC content: 57.04

Gene sequence:

>1143_bases
ATGCAAGGTGGTGCGTACATGAGGATCAAAGTGCACAACACCTGCCCAGACTACAACAGCTACCGCGCCGCGAGCGTTAA
AAGCCTTTTTAATGTGGAACAGGGAAACCACTTCACCCTTGAGGCGGACTTGCCCGTCGAAGAAGTCCCCTGGCGGATAG
GGCTCGTTATAGGGCCGTCGGGTTCAGGCAAATCGTCAATAGGAAAACGGTTGGGTGAAGCAGGCTTTTGTTTTCACCAA
GAATCCGCATGGCCCGCCGATGCCCCTATTATCGACGCCATCGCCAAAGATGGAAACTGGCAGGATGTGACGGGGGCGCT
CTCGGCTGTGGGGCTGGGAGATGTGCCCTCATGGCTGCGGCCCTATCATGTACTTTCCATGGGTGAACGCTTCCGGGCTG
AACTGGCCCGCATAATCAGTGAGCCGCCCGCAAAGATAGTTATCGACGAGTTCACCTCTGTGGTTGACCGGCAGATAGCA
AAGGTCGGTGCCCATGCTTTTGCAAAGGCGTGGCGCAGGACCGGTGGGCAAGCCGTATTGCTATCCTGCCATTACGACAT
CGTAGAGTGGGTGCAACCTGACTGGATGTTTGATACGGCGACCGGCCAACTTGCACGGGGGTGCCTTCCACGCCCCCCAA
TTACACTGGAAATCCGACAATGCGGCTGGGAGTGGTGGCCATACTTTGCGCCGCATCATTATTTAAAACTACCACAAATG
ATTGCGGCAACATGCTATGTGGGCTTCATTGACGGTATACCGGTGGCGCATCTGGCGGTGAGCACCCGGTCACGTTACGA
AGCGCGGGCCTGCCGGCTGGTTGTTATGCCAGAATGGCAAGGAGCCGGGGTCGGCCTGCGTTTTCTGAATGCCGTATGCG
ATATGTGGCGGCGAGGCAAAAACCGCTATGGTATACCAATGCCCGTTTTGTTTCATACTTCACACCCCGGCCTTGCGGTT
GCCCTGCGCCGCCGACCGGAATGGTGCCAGGTCAGCGCCCGGCTGCATGGTGAAAGTAAGATTCGAAGCCGGGAGAGTAT
AGCCAGAAGCGCCCGCAAGAGGGGAAAGCAGTCCCCAAAATCGGGTTATGGAGGTCACTTCCGGGCGGTACAGGGCTTTC
GCTACATGGGAGATCGCCCATGA

Upstream 100 bases:

>100_bases
CAACAGAACGCTACCGGGAACAATTTGGTGTGATTGTACTTTGCACTGATGAGGCAGAGCACAAAGAAGTGTATGAACGT
CTGATGGGTCTTGGGTTTAA

Downstream 100 bases:

>100_bases
AGGTGGCCATCTTAGGACAAGGCTGGTTGGCCACAGAGGTTTTGCACGCGCTAGGCAGAATACCGGCCCTTAGTATTGTG
GCCGCTTCACCGGAAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MQGGAYMRIKVHNTCPDYNSYRAASVKSLFNVEQGNHFTLEADLPVEEVPWRIGLVIGPSGSGKSSIGKRLGEAGFCFHQ
ESAWPADAPIIDAIAKDGNWQDVTGALSAVGLGDVPSWLRPYHVLSMGERFRAELARIISEPPAKIVIDEFTSVVDRQIA
KVGAHAFAKAWRRTGGQAVLLSCHYDIVEWVQPDWMFDTATGQLARGCLPRPPITLEIRQCGWEWWPYFAPHHYLKLPQM
IAATCYVGFIDGIPVAHLAVSTRSRYEARACRLVVMPEWQGAGVGLRFLNAVCDMWRRGKNRYGIPMPVLFHTSHPGLAV
ALRRRPEWCQVSARLHGESKIRSRESIARSARKRGKQSPKSGYGGHFRAVQGFRYMGDRP

Sequences:

>Translated_380_residues
MQGGAYMRIKVHNTCPDYNSYRAASVKSLFNVEQGNHFTLEADLPVEEVPWRIGLVIGPSGSGKSSIGKRLGEAGFCFHQ
ESAWPADAPIIDAIAKDGNWQDVTGALSAVGLGDVPSWLRPYHVLSMGERFRAELARIISEPPAKIVIDEFTSVVDRQIA
KVGAHAFAKAWRRTGGQAVLLSCHYDIVEWVQPDWMFDTATGQLARGCLPRPPITLEIRQCGWEWWPYFAPHHYLKLPQM
IAATCYVGFIDGIPVAHLAVSTRSRYEARACRLVVMPEWQGAGVGLRFLNAVCDMWRRGKNRYGIPMPVLFHTSHPGLAV
ALRRRPEWCQVSARLHGESKIRSRESIARSARKRGKQSPKSGYGGHFRAVQGFRYMGDRP
>Mature_380_residues
MQGGAYMRIKVHNTCPDYNSYRAASVKSLFNVEQGNHFTLEADLPVEEVPWRIGLVIGPSGSGKSSIGKRLGEAGFCFHQ
ESAWPADAPIIDAIAKDGNWQDVTGALSAVGLGDVPSWLRPYHVLSMGERFRAELARIISEPPAKIVIDEFTSVVDRQIA
KVGAHAFAKAWRRTGGQAVLLSCHYDIVEWVQPDWMFDTATGQLARGCLPRPPITLEIRQCGWEWWPYFAPHHYLKLPQM
IAATCYVGFIDGIPVAHLAVSTRSRYEARACRLVVMPEWQGAGVGLRFLNAVCDMWRRGKNRYGIPMPVLFHTSHPGLAV
ALRRRPEWCQVSARLHGESKIRSRESIARSARKRGKQSPKSGYGGHFRAVQGFRYMGDRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42463; Mature: 42463

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGGAYMRIKVHNTCPDYNSYRAASVKSLFNVEQGNHFTLEADLPVEEVPWRIGLVIGPS
CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCEEEEEEECCC
GSGKSSIGKRLGEAGFCFHQESAWPADAPIIDAIAKDGNWQDVTGALSAVGLGDVPSWLR
CCCHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH
PYHVLSMGERFRAELARIISEPPAKIVIDEFTSVVDRQIAKVGAHAFAKAWRRTGGQAVL
HHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LSCHYDIVEWVQPDWMFDTATGQLARGCLPRPPITLEIRQCGWEWWPYFAPHHYLKLPQM
EEECHHHHHHCCCCCEEECCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH
IAATCYVGFIDGIPVAHLAVSTRSRYEARACRLVVMPEWQGAGVGLRFLNAVCDMWRRGK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
NRYGIPMPVLFHTSHPGLAVALRRRPEWCQVSARLHGESKIRSRESIARSARKRGKQSPK
CCCCCCCEEEEECCCCCEEEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
SGYGGHFRAVQGFRYMGDRP
CCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MQGGAYMRIKVHNTCPDYNSYRAASVKSLFNVEQGNHFTLEADLPVEEVPWRIGLVIGPS
CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCEEEEEEECCC
GSGKSSIGKRLGEAGFCFHQESAWPADAPIIDAIAKDGNWQDVTGALSAVGLGDVPSWLR
CCCHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH
PYHVLSMGERFRAELARIISEPPAKIVIDEFTSVVDRQIAKVGAHAFAKAWRRTGGQAVL
HHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LSCHYDIVEWVQPDWMFDTATGQLARGCLPRPPITLEIRQCGWEWWPYFAPHHYLKLPQM
EEECHHHHHHCCCCCEEECCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH
IAATCYVGFIDGIPVAHLAVSTRSRYEARACRLVVMPEWQGAGVGLRFLNAVCDMWRRGK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
NRYGIPMPVLFHTSHPGLAVALRRRPEWCQVSARLHGESKIRSRESIARSARKRGKQSPK
CCCCCCCEEEEECCCCCEEEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
SGYGGHFRAVQGFRYMGDRP
CCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA