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The map label for this gene is yfdL [C]

Identifier: 78358433

GI number: 78358433

Start: 3358022

End: 3359581

Strand: Direct

Name: yfdL [C]

Synonym: Dde_3393

Alternate gene names: 78358433

Gene position: 3358022-3359581 (Clockwise)

Preceding gene: 78358432

Following gene: 78358434

Centisome position: 90.02

GC content: 58.14

Gene sequence:

>1560_bases
GTGAGCCTTATCATTACCAAAGCGGGCTTGTTGGCCCTGAGTGCGGCAGAAACGTCAGGCGCGAAGCTGCAGGCTACCCA
TATGGCCGTAGGCGACGGCTCGGGCCAGCCCCCGGAACACACCAACGCATCCACGGCGCTCGTCAATGAAGTTTGGCGCG
GCGCGCTGGATGCCATCACCCTGCGAGAAGACGGGCAGACGGAAAGCGGGCAGGCCGTGGAATTCCGCGCCCACATCCCC
ATGACAACAGGTGGCTGGTATATTCGTGAAGTTGCTATCTATGCGGATGATGTGCTGCTGGCCATTGGTGCACATCCTGT
CATGTGGAAACCCTCGCCGGACGACCCCACCAAGCTGGAGCATACCATTTATGCCCCTGTGGTTTTTGGTAACGCCGCTA
CCCTTGCGCTGACCATTGATCCGTCTAAAGTTCTTGCCACGCAACAGGCCGTGGATGAGGCAGTTGCGGCACACAACGTC
AGTCCCAACGCCCACGGTAACGTTTTTAAAGCTCTTGATGACCACATCGGGGACCAAAACGACCCGCATGCAACGCTGCC
GCCTGGTGGCGATCCGGGGCAGACAATCATCAAGCAGACAGATGGACGTCTTGCGTGGGGCGCTGTTACGGGTATGCCTG
TGGGCGCATTGCTTTTTTCCACCACCGGCACACCGCTGCCCGGCACAGTGGCGGTCAATGTTAAACAAAAATTTACACTG
GGCACCTACCCCCAGCTGGAAGCATGGGTGCGCAGCTGCGGGGGCTATCTGGCCACAGAGGCGGAATGGGACGCAGAGGC
CGCTGCACAGGAAGGCTCCTGCGGCAAGTACTGCCTGACGGATACGCATATCATTCTGCCTTGCTACAGACACTACTTCT
CGGCCGCGCAGAATGGTGCGGCGGGTAAGGCGGCAGGCGACTGGGCCGGTGATGCCATACGGAACCTTACTGGTGAACTC
AAGTCATCCACTTCGCCTAACAGCCTTTTCCCAAGTCTCAGAGACACCGCTTCTGCAACCGGCGTCTTTCAGGTCAATGC
AGAAGACCTTGGCGGGCGTATTGACCAATCCGTGAACACATACATTGCTGCGGAGCGTGTCTTGTTCGACGCTTCCCGCG
TGGTCCCCACGGCCGACGAAAACCGCCCGAAAACCAGTTATCTGCTGCCCTGCATCAAAGCCTTTGATGTGGCTGTAAAT
ACCGCACAGGTGGACATGCAGGCTCTTGCTGCACAGGTCAGCGCCATTAACGGCAACAAGGTTGACCGCAGCGAGTGGAC
GCAGAGTCTGGGCGAAAGCGGCTGGCAACGGCTGCCCAGCGGGCTGATTCTGCAGTGGGGCACCGGTTCTGTATCAACTG
GAGTCGCCACAGAGGTAACGCTGCCGATCGCCTACCCGAACGCGCAGCTGTCTTGCGTTGCTGTTATCGGCATTGACTAC
GGTTCTGTCGGCAACGACGCCATCGCTGTATACAACAGGATGGCAGGCAAGTTCACCCTGAAGGGAGAACACTCCGGTTC
AACTGTAATGCCATATTCATACATCTCCATCGGCTACTAA

Upstream 100 bases:

>100_bases
CTGGAATACGAGCGCCCGGACTCTACCAAGGTCGCCGGGGCCGTCCGGATAGCCGGGCACATGCATATTGTCAGCAGAAT
CAGATTATAAGGAGAGCACC

Downstream 100 bases:

>100_bases
GGAGGCCGCGCAATGAAATACAGCCCTTCAACAAACGCATTCTACCATCCCGCAGTTCACGGCCATGCCATTCCTGCCGA
TGCCGTGGCCGTCAGTCCCG

Product: tail fiber protein

Products: NA

Alternate protein names: Tail Collar Domain Protein; Phage Tail Fiber Protein; Phage-Related Tail Fibre Protein-Like Protein; Variable Tail Fibre Protein; Tail Fiber-Related Protein; Phage Tail Collar Domain Protein; Phage Tail Fiber Protein H; Variable Tail Fiber Protein; Tail Fiber Domain Protein; Tail Fiber Domain-Containing Protein; Phage Tail Collar Domain-Containing Protein; Bacteriophage Tail Protein; Phage Tail Fibre Protein; Tail Fiber Protein H; Side Tail Phage Protein; Phage Variable Tail Fiber Protein; Tail Fiber Repeat 2 Protein; Phage Variable Tail Fibre Protein; Phage-Like Tail Fiber-Like Protein; Phage Tail-Like Protein; Bacteriophage Variable Tail Fiber Protein H; E14 Prophage; Bacteriophage Variable Tail Fibre Protein; Phage Protein GpH; Phage-Like Tail Fibre Protein; Tail Fiber Repeat 2-Containing Protein; Tail Fiber Protein GpH

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MSLIITKAGLLALSAAETSGAKLQATHMAVGDGSGQPPEHTNASTALVNEVWRGALDAITLREDGQTESGQAVEFRAHIP
MTTGGWYIREVAIYADDVLLAIGAHPVMWKPSPDDPTKLEHTIYAPVVFGNAATLALTIDPSKVLATQQAVDEAVAAHNV
SPNAHGNVFKALDDHIGDQNDPHATLPPGGDPGQTIIKQTDGRLAWGAVTGMPVGALLFSTTGTPLPGTVAVNVKQKFTL
GTYPQLEAWVRSCGGYLATEAEWDAEAAAQEGSCGKYCLTDTHIILPCYRHYFSAAQNGAAGKAAGDWAGDAIRNLTGEL
KSSTSPNSLFPSLRDTASATGVFQVNAEDLGGRIDQSVNTYIAAERVLFDASRVVPTADENRPKTSYLLPCIKAFDVAVN
TAQVDMQALAAQVSAINGNKVDRSEWTQSLGESGWQRLPSGLILQWGTGSVSTGVATEVTLPIAYPNAQLSCVAVIGIDY
GSVGNDAIAVYNRMAGKFTLKGEHSGSTVMPYSYISIGY

Sequences:

>Translated_519_residues
MSLIITKAGLLALSAAETSGAKLQATHMAVGDGSGQPPEHTNASTALVNEVWRGALDAITLREDGQTESGQAVEFRAHIP
MTTGGWYIREVAIYADDVLLAIGAHPVMWKPSPDDPTKLEHTIYAPVVFGNAATLALTIDPSKVLATQQAVDEAVAAHNV
SPNAHGNVFKALDDHIGDQNDPHATLPPGGDPGQTIIKQTDGRLAWGAVTGMPVGALLFSTTGTPLPGTVAVNVKQKFTL
GTYPQLEAWVRSCGGYLATEAEWDAEAAAQEGSCGKYCLTDTHIILPCYRHYFSAAQNGAAGKAAGDWAGDAIRNLTGEL
KSSTSPNSLFPSLRDTASATGVFQVNAEDLGGRIDQSVNTYIAAERVLFDASRVVPTADENRPKTSYLLPCIKAFDVAVN
TAQVDMQALAAQVSAINGNKVDRSEWTQSLGESGWQRLPSGLILQWGTGSVSTGVATEVTLPIAYPNAQLSCVAVIGIDY
GSVGNDAIAVYNRMAGKFTLKGEHSGSTVMPYSYISIGY
>Mature_518_residues
SLIITKAGLLALSAAETSGAKLQATHMAVGDGSGQPPEHTNASTALVNEVWRGALDAITLREDGQTESGQAVEFRAHIPM
TTGGWYIREVAIYADDVLLAIGAHPVMWKPSPDDPTKLEHTIYAPVVFGNAATLALTIDPSKVLATQQAVDEAVAAHNVS
PNAHGNVFKALDDHIGDQNDPHATLPPGGDPGQTIIKQTDGRLAWGAVTGMPVGALLFSTTGTPLPGTVAVNVKQKFTLG
TYPQLEAWVRSCGGYLATEAEWDAEAAAQEGSCGKYCLTDTHIILPCYRHYFSAAQNGAAGKAAGDWAGDAIRNLTGELK
SSTSPNSLFPSLRDTASATGVFQVNAEDLGGRIDQSVNTYIAAERVLFDASRVVPTADENRPKTSYLLPCIKAFDVAVNT
AQVDMQALAAQVSAINGNKVDRSEWTQSLGESGWQRLPSGLILQWGTGSVSTGVATEVTLPIAYPNAQLSCVAVIGIDYG
SVGNDAIAVYNRMAGKFTLKGEHSGSTVMPYSYISIGY

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54600; Mature: 54468

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIITKAGLLALSAAETSGAKLQATHMAVGDGSGQPPEHTNASTALVNEVWRGALDAIT
CEEEEEECCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEE
LREDGQTESGQAVEFRAHIPMTTGGWYIREVAIYADDVLLAIGAHPVMWKPSPDDPTKLE
ECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCEEECCCCCCCCCCC
HTIYAPVVFGNAATLALTIDPSKVLATQQAVDEAVAAHNVSPNAHGNVFKALDDHIGDQN
EEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
DPHATLPPGGDPGQTIIKQTDGRLAWGAVTGMPVGALLFSTTGTPLPGTVAVNVKQKFTL
CCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHEEEECCCCCCCCEEEEEEEEEEEC
GTYPQLEAWVRSCGGYLATEAEWDAEAAAQEGSCGKYCLTDTHIILPCYRHYFSAAQNGA
CCCHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCEEECCCEEEHHHHHHHHHHHCCCC
AGKAAGDWAGDAIRNLTGELKSSTSPNSLFPSLRDTASATGVFQVNAEDLGGRIDQSVNT
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCEEEEECHHHHCCHHHHHHHH
YIAAERVLFDASRVVPTADENRPKTSYLLPCIKAFDVAVNTAQVDMQALAAQVSAINGNK
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
VDRSEWTQSLGESGWQRLPSGLILQWGTGSVSTGVATEVTLPIAYPNAQLSCVAVIGIDY
CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECC
GSVGNDAIAVYNRMAGKFTLKGEHSGSTVMPYSYISIGY
CCCCCCHHHHHHHCCCEEEEECCCCCCEECCEEEEEECC
>Mature Secondary Structure 
SLIITKAGLLALSAAETSGAKLQATHMAVGDGSGQPPEHTNASTALVNEVWRGALDAIT
EEEEEECCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEE
LREDGQTESGQAVEFRAHIPMTTGGWYIREVAIYADDVLLAIGAHPVMWKPSPDDPTKLE
ECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCEEECCCCCCCCCCC
HTIYAPVVFGNAATLALTIDPSKVLATQQAVDEAVAAHNVSPNAHGNVFKALDDHIGDQN
EEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
DPHATLPPGGDPGQTIIKQTDGRLAWGAVTGMPVGALLFSTTGTPLPGTVAVNVKQKFTL
CCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHEEEECCCCCCCCEEEEEEEEEEEC
GTYPQLEAWVRSCGGYLATEAEWDAEAAAQEGSCGKYCLTDTHIILPCYRHYFSAAQNGA
CCCHHHHHHHHHCCCEEEECCCCCHHHHHCCCCCCCEEECCCEEEHHHHHHHHHHHCCCC
AGKAAGDWAGDAIRNLTGELKSSTSPNSLFPSLRDTASATGVFQVNAEDLGGRIDQSVNT
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCEEEEECHHHHCCHHHHHHHH
YIAAERVLFDASRVVPTADENRPKTSYLLPCIKAFDVAVNTAQVDMQALAAQVSAINGNK
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
VDRSEWTQSLGESGWQRLPSGLILQWGTGSVSTGVATEVTLPIAYPNAQLSCVAVIGIDY
CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEEEECC
GSVGNDAIAVYNRMAGKFTLKGEHSGSTVMPYSYISIGY
CCCCCCHHHHHHHCCCEEEEECCCCCCEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA