| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358403
Identifier: 78358403
GI number: 78358403
Start: 3335001
End: 3335693
Strand: Direct
Name: 78358403
Synonym: Dde_3363
Alternate gene names: NA
Gene position: 3335001-3335693 (Clockwise)
Preceding gene: 78358400
Following gene: 78358406
Centisome position: 89.4
GC content: 43.0
Gene sequence:
>693_bases ATGTCCACCTTAGCTACTGGTCCAGTTTTCCGAACCCACTTCTCATGGCTAAATACGGCAAAGCTGGAGCCGGTTATATC AGAGGACGGGGAACCTGTCGTCGATATTCCAAGTGACATGAAGCCTAACTGCAAAATGTCAAGTTTCATATTTATTCCAT CTGGTCATAGAATGTTTTTTGTCTCACAACATGATAATGTGAATTTCTCTAGCGCCTTCACAGCCAAGGCGCTATCAATC CTTTTTAATTCAAATGAACTAGTTGAAAAGTATGGTGAAGTTTCTGTTACCGTAGAGAGTACGGATGAAACCATAACACA GATTCTTGAAATCCCCTCTTTGACAAGGCTCGTGATTGGTATAACACTCCCCAACGACGACGATGTGTCGGGGGAGATGA AAAATGCTCTTGAGCGCATGAAGGCTCAAAAAGTAAAGCGACAACGACATGAACTTGCGGGACGAAAGGAAGACGGTATT TTGCCCGATGATCAAACAATTGCTTTGATGAGCCTAGCGCGCAGTAACGGTTATGTCCAAGCTGACGGTTATGACGGGAA AAGAAAAGTCAGCGAAAAAACATCAAGCCACCCAGTTGAAATTCGCGAGAGCTATGATCCAATCAACAGCTCACCATGGA TACGTCTTCAACAGATAGCTCGTGACAATATTCAAAAATTTATAAGAAGATGA
Upstream 100 bases:
>100_bases GTGTGCTCGCCGGACAAAGCGTCCAGGGCGACGCGGGTCTTGAACTCGGCGGTAAACTTTCTTCTCTTCTTGGACATCAA GGGCCTCCTTCGGCTCTTAT
Downstream 100 bases:
>100_bases GCTTGTTAAAAATTTTAATTAAAGAGCATTTTTGCAAAGTTATAGAGGGACCAAGAAGGTCCCTCTTAACATATTGGGAG GTTTATGGTGGCCTTAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSTLATGPVFRTHFSWLNTAKLEPVISEDGEPVVDIPSDMKPNCKMSSFIFIPSGHRMFFVSQHDNVNFSSAFTAKALSI LFNSNELVEKYGEVSVTVESTDETITQILEIPSLTRLVIGITLPNDDDVSGEMKNALERMKAQKVKRQRHELAGRKEDGI LPDDQTIALMSLARSNGYVQADGYDGKRKVSEKTSSHPVEIRESYDPINSSPWIRLQQIARDNIQKFIRR
Sequences:
>Translated_230_residues MSTLATGPVFRTHFSWLNTAKLEPVISEDGEPVVDIPSDMKPNCKMSSFIFIPSGHRMFFVSQHDNVNFSSAFTAKALSI LFNSNELVEKYGEVSVTVESTDETITQILEIPSLTRLVIGITLPNDDDVSGEMKNALERMKAQKVKRQRHELAGRKEDGI LPDDQTIALMSLARSNGYVQADGYDGKRKVSEKTSSHPVEIRESYDPINSSPWIRLQQIARDNIQKFIRR >Mature_229_residues STLATGPVFRTHFSWLNTAKLEPVISEDGEPVVDIPSDMKPNCKMSSFIFIPSGHRMFFVSQHDNVNFSSAFTAKALSIL FNSNELVEKYGEVSVTVESTDETITQILEIPSLTRLVIGITLPNDDDVSGEMKNALERMKAQKVKRQRHELAGRKEDGIL PDDQTIALMSLARSNGYVQADGYDGKRKVSEKTSSHPVEIRESYDPINSSPWIRLQQIARDNIQKFIRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25888; Mature: 25756
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLATGPVFRTHFSWLNTAKLEPVISEDGEPVVDIPSDMKPNCKMSSFIFIPSGHRMFF CCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCCEEEE VSQHDNVNFSSAFTAKALSILFNSNELVEKYGEVSVTVESTDETITQILEIPSLTRLVIG EECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEEECCHHHHHHHHHCCCCEEEEEE ITLPNDDDVSGEMKNALERMKAQKVKRQRHELAGRKEDGILPDDQTIALMSLARSNGYVQ EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEE ADGYDGKRKVSEKTSSHPVEIRESYDPINSSPWIRLQQIARDNIQKFIRR ECCCCCHHHHHHHCCCCCEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure STLATGPVFRTHFSWLNTAKLEPVISEDGEPVVDIPSDMKPNCKMSSFIFIPSGHRMFF CCCCCCCHHHHHHHHHHHCCCCHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCCEEEE VSQHDNVNFSSAFTAKALSILFNSNELVEKYGEVSVTVESTDETITQILEIPSLTRLVIG EECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEEECCHHHHHHHHHCCCCEEEEEE ITLPNDDDVSGEMKNALERMKAQKVKRQRHELAGRKEDGILPDDQTIALMSLARSNGYVQ EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEE ADGYDGKRKVSEKTSSHPVEIRESYDPINSSPWIRLQQIARDNIQKFIRR ECCCCCHHHHHHHCCCCCEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA