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The map label for this gene is yagA [C]

Identifier: 78358382

GI number: 78358382

Start: 3323331

End: 3324095

Strand: Direct

Name: yagA [C]

Synonym: Dde_3342

Alternate gene names: 78358382

Gene position: 3323331-3324095 (Clockwise)

Preceding gene: 78358381

Following gene: 78358383

Centisome position: 89.09

GC content: 53.33

Gene sequence:

>765_bases
GTGGGCTTATCCAGGACGGCCTATTATCGGTTGCCTGCAAGTGGGAGCCGTGTTCACGAAGTCATCGAGGCGATCAACTC
ATTAATAGACAAACACCCTCGCTGGGGATTCTGGAAGTGCTTCAAGGTACTGCGTCGCAAGCATTGCTGGAACCACAAGA
GGGTATATCGCGTCTACTGCGAGCTGCGGCTGAACCTGAAGAGCCGGGCAAAGAAGCGGTTGCCTCAACGCACTAAGCAG
CCGCTGTCGATCCCGGCCCAGCCCAACCTGACGTGGTCTGCCGACTTCATGAGCGACTCGCTTTATGCGGGGAAACGATT
TCGAACCTTCAACGTTATTGACGACTTCAACCGCGAACTGCTGCACGTCGAAATTGACACCTCCATTACCGGAAGGCGGT
TAATCCGAGTGTTTGAACGGCTACGCTTGGAACGAGGCCTTCCCCAAGTGCTGAGGACGGACAACGGACCGGAATTCCTT
TCCGGTGAGTTTGTAGCCTGGGCCGAGTCGGCAGGAATGAGCATCCAATATATTCAACCCGGAGAACCTAATCAGAACGC
GTACATTGAACGGTTCAACCGGACATATCGCACCGAAGTGCTTGATCTCTATCTCTTCAGGACTCTGAATGAGGTCCGGG
AGATCACCCACTGGTGGAAGATTGAATACAACGAACAGCGGCCCCATGACTCTCTCGGGGACCTGACACCCTCCGAGTTT
TTATCCAACAACGCTGGAAACTCTATTTTTCAACTGTCCTCTTGA

Upstream 100 bases:

>100_bases
ATCTGATCGAAAAAAAGCTTTAAGGCCGACTGGGAAACGCGAGGCGGTCGCTTATCTGACTGTCGAGCACAATCTGTCCA
TACTACGCAGTTGCCGCTGC

Downstream 100 bases:

>100_bases
CGGGGAAGCTTACGAAGACATGCTAAAACCATAAGGAAACAACAATTATGAGTGACACTTCACCCATCAAGGTTCTTGGT
CGTTTTGAACTTGGAGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MGLSRTAYYRLPASGSRVHEVIEAINSLIDKHPRWGFWKCFKVLRRKHCWNHKRVYRVYCELRLNLKSRAKKRLPQRTKQ
PLSIPAQPNLTWSADFMSDSLYAGKRFRTFNVIDDFNRELLHVEIDTSITGRRLIRVFERLRLERGLPQVLRTDNGPEFL
SGEFVAWAESAGMSIQYIQPGEPNQNAYIERFNRTYRTEVLDLYLFRTLNEVREITHWWKIEYNEQRPHDSLGDLTPSEF
LSNNAGNSIFQLSS

Sequences:

>Translated_254_residues
MGLSRTAYYRLPASGSRVHEVIEAINSLIDKHPRWGFWKCFKVLRRKHCWNHKRVYRVYCELRLNLKSRAKKRLPQRTKQ
PLSIPAQPNLTWSADFMSDSLYAGKRFRTFNVIDDFNRELLHVEIDTSITGRRLIRVFERLRLERGLPQVLRTDNGPEFL
SGEFVAWAESAGMSIQYIQPGEPNQNAYIERFNRTYRTEVLDLYLFRTLNEVREITHWWKIEYNEQRPHDSLGDLTPSEF
LSNNAGNSIFQLSS
>Mature_253_residues
GLSRTAYYRLPASGSRVHEVIEAINSLIDKHPRWGFWKCFKVLRRKHCWNHKRVYRVYCELRLNLKSRAKKRLPQRTKQP
LSIPAQPNLTWSADFMSDSLYAGKRFRTFNVIDDFNRELLHVEIDTSITGRRLIRVFERLRLERGLPQVLRTDNGPEFLS
GEFVAWAESAGMSIQYIQPGEPNQNAYIERFNRTYRTEVLDLYLFRTLNEVREITHWWKIEYNEQRPHDSLGDLTPSEFL
SNNAGNSIFQLSS

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=160, Percent_Identity=28.75, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 30053; Mature: 29921

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSRTAYYRLPASGSRVHEVIEAINSLIDKHPRWGFWKCFKVLRRKHCWNHKRVYRVYC
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
ELRLNLKSRAKKRLPQRTKQPLSIPAQPNLTWSADFMSDSLYAGKRFRTFNVIDDFNREL
HHHHCHHHHHHHHCHHHHCCCCCCCCCCCCEEEHHHHCCHHHCCCCEEEECHHHHCCCEE
LHVEIDTSITGRRLIRVFERLRLERGLPQVLRTDNGPEFLSGEFVAWAESAGMSIQYIQP
EEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECC
GEPNQNAYIERFNRTYRTEVLDLYLFRTLNEVREITHWWKIEYNEQRPHDSLGDLTPSEF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHH
LSNNAGNSIFQLSS
HCCCCCCCEEEECC
>Mature Secondary Structure 
GLSRTAYYRLPASGSRVHEVIEAINSLIDKHPRWGFWKCFKVLRRKHCWNHKRVYRVYC
CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
ELRLNLKSRAKKRLPQRTKQPLSIPAQPNLTWSADFMSDSLYAGKRFRTFNVIDDFNREL
HHHHCHHHHHHHHCHHHHCCCCCCCCCCCCEEEHHHHCCHHHCCCCEEEECHHHHCCCEE
LHVEIDTSITGRRLIRVFERLRLERGLPQVLRTDNGPEFLSGEFVAWAESAGMSIQYIQP
EEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECC
GEPNQNAYIERFNRTYRTEVLDLYLFRTLNEVREITHWWKIEYNEQRPHDSLGDLTPSEF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHH
LSNNAGNSIFQLSS
HCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2152895 [H]