| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is phnN [H]
Identifier: 78358376
GI number: 78358376
Start: 3320368
End: 3320922
Strand: Direct
Name: phnN [H]
Synonym: Dde_3336
Alternate gene names: 78358376
Gene position: 3320368-3320922 (Clockwise)
Preceding gene: 78358375
Following gene: 78358378
Centisome position: 89.01
GC content: 61.44
Gene sequence:
>555_bases GTGACCGGCCCGCTGTTTTATGTCATGGGGCCTTCCGGCGCGGGCAAGGATACCGTGCTGGATGCCGTGCGCAGCCGCGC GGAATGCGCCGGAGTTCTCTTTGCACGGCGGTACATCACACGGCCTGCATCAGCCGGCGGTGAACGCCACATGCCGCTTC ATCCCCAAGAATTCGACGCCATGCGTCATGCAGGTCAGTTTGCCCTGCACTGGCAAAGCCACGGTCTGCACTACGGCATA GGCATAGAAATCGACGGATGGCTGGCACAGGGACACGCCGTGGTCGTCAACGGTTCGCGAGGCTATCTGAAAAGCGCACT GCTGCGGTACCCCGCCATGCATCCCGTGCTTGTGACGGCACCCGAAAGTCTGATTGCAGAACGCCTTGCACAGCGGGGGC GCGAGACTGAAGCGCAGATTCGCAGACGCCTGCAGCACAACTGCCTGCTGGCGGACTGCGGCACCGGCAAAGATTGCGCC GTCATTGTCAATGACTCCACAGTGCAGGCGGCAGCGGAGCGCTTTTTCTCATTATTGCGCCCTTATCTTCGCTGA
Upstream 100 bases:
>100_bases TGCCCGTGCACGAAGTCACCGTATGCTTTCAGCCTGACCGCAGCTCGCCGTTTACCGAACGCGCCCGCGTGGCACTGGGC AGCACACAGGAGAATGCGCA
Downstream 100 bases:
>100_bases AACACACAGCGCGCCCGTGTTACGGGCGCGCTGTGATATCCGGCCATGTCAGACGGCCATATCAGACCGCCATGCGGCAG ATGGTAATCCCCCCCATTTC
Product: guanylate kinase/L-type calcium channel region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTGPLFYVMGPSGAGKDTVLDAVRSRAECAGVLFARRYITRPASAGGERHMPLHPQEFDAMRHAGQFALHWQSHGLHYGI GIEIDGWLAQGHAVVVNGSRGYLKSALLRYPAMHPVLVTAPESLIAERLAQRGRETEAQIRRRLQHNCLLADCGTGKDCA VIVNDSTVQAAAERFFSLLRPYLR
Sequences:
>Translated_184_residues MTGPLFYVMGPSGAGKDTVLDAVRSRAECAGVLFARRYITRPASAGGERHMPLHPQEFDAMRHAGQFALHWQSHGLHYGI GIEIDGWLAQGHAVVVNGSRGYLKSALLRYPAMHPVLVTAPESLIAERLAQRGRETEAQIRRRLQHNCLLADCGTGKDCA VIVNDSTVQAAAERFFSLLRPYLR >Mature_183_residues TGPLFYVMGPSGAGKDTVLDAVRSRAECAGVLFARRYITRPASAGGERHMPLHPQEFDAMRHAGQFALHWQSHGLHYGIG IEIDGWLAQGHAVVVNGSRGYLKSALLRYPAMHPVLVTAPESLIAERLAQRGRETEAQIRRRLQHNCLLADCGTGKDCAV IVNDSTVQAAAERFFSLLRPYLR
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3709
COG function: function code P; Uncharacterized component of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790532, Length=180, Percent_Identity=41.6666666666667, Blast_Score=134, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR012699 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: NA
Molecular weight: Translated: 20246; Mature: 20114
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPLFYVMGPSGAGKDTVLDAVRSRAECAGVLFARRYITRPASAGGERHMPLHPQEFDA CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH MRHAGQFALHWQSHGLHYGIGIEIDGWLAQGHAVVVNGSRGYLKSALLRYPAMHPVLVTA HHHCCCEEEEEECCCEEEEEEEEECCEEECCCEEEEECCCHHHHHHHHHCCCCCCEEEEC PESLIAERLAQRGRETEAQIRRRLQHNCLLADCGTGKDCAVIVNDSTVQAAAERFFSLLR CHHHHHHHHHHCCCCCHHHHHHHHHHCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHH PYLR HHCC >Mature Secondary Structure TGPLFYVMGPSGAGKDTVLDAVRSRAECAGVLFARRYITRPASAGGERHMPLHPQEFDA CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH MRHAGQFALHWQSHGLHYGIGIEIDGWLAQGHAVVVNGSRGYLKSALLRYPAMHPVLVTA HHHCCCEEEEEECCCEEEEEEEEECCEEECCCEEEEECCCHHHHHHHHHCCCCCCEEEEC PESLIAERLAQRGRETEAQIRRRLQHNCLLADCGTGKDCAVIVNDSTVQAAAERFFSLLR CHHHHHHHHHHCCCCCHHHHHHHHHHCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHH PYLR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]