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The map label for this gene is opuAC [H]

Identifier: 78358346

GI number: 78358346

Start: 3292501

End: 3293406

Strand: Direct

Name: opuAC [H]

Synonym: Dde_3306

Alternate gene names: 78358346

Gene position: 3292501-3293406 (Clockwise)

Preceding gene: 78358345

Following gene: 78358347

Centisome position: 88.27

GC content: 60.04

Gene sequence:

>906_bases
ATGCGCAGAGTTATCGTTTTTGTCGCAGCGGTGCTTATTCTGGCAGCCGGTCCTGTCCGCGCGGCTGAAAAACCCGTGAC
CATAGCATATGCGCAATGGTCGTCCTCCATAGCCAGTGCCAATCTGATGAAGGCGCTCATTCAGGAAAAACTGGGGATTC
CCTGCACGCTGGTGGCTGCCGGCGCCGGAGAAATGTGGCGCATGGTGGCCGCCGGCGAGGCGGACGCCATGCTTTCCGCA
TGGCTGCCGCACACACACTCCGCCTACCGCGCCAGATACGCCGGTATGCTGGACGACCTGGGCCCCAATCTGGAAGGCAC
CCGCACGGGACTGGTGGTGCCGCGGGTAACGGCAGGCAGGTTTACAGCCGGTACGGGGCTGCGCAACAGGCCGTATGTGA
CCACCGCATCCATACCCGCACTGCGTAAAGATGCCCAGCGTTACCGTCACCGCATCATCGGCATAGAACCCGATGCCGGT
GTAATGGAAAAGGCGGAACGGGCTCTTGATGTCTACGGGCTGAGGGACAGCTTCAGGCTGGAGTCCGGCAGCGAAGTGGC
CATGATGGCGGAGCTTTCGCACGCCGTACGGCATCAGGAGTGGGTCGTATTTACCGGCTGGCTGCCGCACTGGGCGTTCG
CACGCTGGAATCTGGAGTTTCTGGAAGACCCTGAAGGCGTTTTTTCTGAAAGCGGCAGCATACATACCATGACCCGCAAG
GGTCTGGCCGAAGAGAATCAGGCGGTATTCCGCCTGCTGGACGCATTTTACTGGTCTCCCGAAGACATGGGCCAGCTGAT
GCTGTGGATTCAGGACGACAAAGGGCTTTTCCCCTACGAAAAAGCGCTCCGCTGGATTCGCACGCATCCCGAAAAGGTTA
CCCGCTGGCTGGCAGAACAACCGTAA

Upstream 100 bases:

>100_bases
ACGCTTCCGGGTGAAGCGCAAACCTGTACTGGACAGAACCTTCGGGAGGCGCAAGTTCTGGTAGCAGCCCTGTTTCCTCA
GCCTGACAAGGAGAACCATC

Downstream 100 bases:

>100_bases
CCACGGAGAATATCATATATGCTTCAAGATGTTCATATGCGCTATCGTAACGGCTGCATGAAGCTTTTTAAAACCGACAG
CAGAAACCAACTTGTTTTCC

Product: glycine/betaine/L-proline ABC transporter periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRRVIVFVAAVLILAAGPVRAAEKPVTIAYAQWSSSIASANLMKALIQEKLGIPCTLVAAGAGEMWRMVAAGEADAMLSA
WLPHTHSAYRARYAGMLDDLGPNLEGTRTGLVVPRVTAGRFTAGTGLRNRPYVTTASIPALRKDAQRYRHRIIGIEPDAG
VMEKAERALDVYGLRDSFRLESGSEVAMMAELSHAVRHQEWVVFTGWLPHWAFARWNLEFLEDPEGVFSESGSIHTMTRK
GLAEENQAVFRLLDAFYWSPEDMGQLMLWIQDDKGLFPYEKALRWIRTHPEKVTRWLAEQP

Sequences:

>Translated_301_residues
MRRVIVFVAAVLILAAGPVRAAEKPVTIAYAQWSSSIASANLMKALIQEKLGIPCTLVAAGAGEMWRMVAAGEADAMLSA
WLPHTHSAYRARYAGMLDDLGPNLEGTRTGLVVPRVTAGRFTAGTGLRNRPYVTTASIPALRKDAQRYRHRIIGIEPDAG
VMEKAERALDVYGLRDSFRLESGSEVAMMAELSHAVRHQEWVVFTGWLPHWAFARWNLEFLEDPEGVFSESGSIHTMTRK
GLAEENQAVFRLLDAFYWSPEDMGQLMLWIQDDKGLFPYEKALRWIRTHPEKVTRWLAEQP
>Mature_301_residues
MRRVIVFVAAVLILAAGPVRAAEKPVTIAYAQWSSSIASANLMKALIQEKLGIPCTLVAAGAGEMWRMVAAGEADAMLSA
WLPHTHSAYRARYAGMLDDLGPNLEGTRTGLVVPRVTAGRFTAGTGLRNRPYVTTASIPALRKDAQRYRHRIIGIEPDAG
VMEKAERALDVYGLRDSFRLESGSEVAMMAELSHAVRHQEWVVFTGWLPHWAFARWNLEFLEDPEGVFSESGSIHTMTRK
GLAEENQAVFRLLDAFYWSPEDMGQLMLWIQDDKGLFPYEKALRWIRTHPEKVTRWLAEQP

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33706; Mature: 33706

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVIVFVAAVLILAAGPVRAAEKPVTIAYAQWSSSIASANLMKALIQEKLGIPCTLVAA
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GAGEMWRMVAAGEADAMLSAWLPHTHSAYRARYAGMLDDLGPNLEGTRTGLVVPRVTAGR
CCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC
FTAGTGLRNRPYVTTASIPALRKDAQRYRHRIIGIEPDAGVMEKAERALDVYGLRDSFRL
EECCCCCCCCCEEEECCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHCCC
ESGSEVAMMAELSHAVRHQEWVVFTGWLPHWAFARWNLEFLEDPEGVFSESGSIHTMTRK
CCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCHHHHCCCCHHHHCCCCEEEHHHH
GLAEENQAVFRLLDAFYWSPEDMGQLMLWIQDDKGLFPYEKALRWIRTHPEKVTRWLAEQ
CCCHHHHHHHHHHHHHHCCHHHHCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHCC
P
C
>Mature Secondary Structure
MRRVIVFVAAVLILAAGPVRAAEKPVTIAYAQWSSSIASANLMKALIQEKLGIPCTLVAA
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GAGEMWRMVAAGEADAMLSAWLPHTHSAYRARYAGMLDDLGPNLEGTRTGLVVPRVTAGR
CCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC
FTAGTGLRNRPYVTTASIPALRKDAQRYRHRIIGIEPDAGVMEKAERALDVYGLRDSFRL
EECCCCCCCCCEEEECCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCHHCCC
ESGSEVAMMAELSHAVRHQEWVVFTGWLPHWAFARWNLEFLEDPEGVFSESGSIHTMTRK
CCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCHHHHCCCCHHHHCCCCEEEHHHH
GLAEENQAVFRLLDAFYWSPEDMGQLMLWIQDDKGLFPYEKALRWIRTHPEKVTRWLAEQ
CCCHHHHHHHHHHHHHHCCHHHHCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]