| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is ahcY
Identifier: 78358174
GI number: 78358174
Start: 3124684
End: 3126123
Strand: Reverse
Name: ahcY
Synonym: Dde_3134
Alternate gene names: 78358174
Gene position: 3126123-3124684 (Counterclockwise)
Preceding gene: 78358175
Following gene: 78358172
Centisome position: 83.81
GC content: 55.21
Gene sequence:
>1440_bases ATGACAGATGCCCGCAAAGCCCTTCCTCTGGACTTGAGCCTTGAAAACAAGGTCAAAGATCTTTCCCAGGCCGATTTCGG CTACAAGGAAATGCAGCTTTCCGAACGTGAAATGCCCGGCCTGATGGAACTGATAGCCAAGCACGGTGCCGAAAAGCCGC TCAAGGGGCTCAAGGTCACAGGCTCGCTGCATATGACCATTCAGACCGCCATGCTTATCAAAACTCTGTACGAGCTGGGC GCTGATATCCGCTGGGCTTCGTGCAACATATTCTCCACGCAGGACCATGCCGCAGCCGCCATTGCCGATTCGGGCATGGC AAAGGTTTTTGCATGGAAAGGTGAAACGCTGGAAGAATACTGGTGGTGCACCGAAATGGCGCTTACCTGGCCCGACGGGT CCGGTCCCGATCTTATCGTGGACGACGGCGGCGACGCCACCATGCTTATCCATAAAGGGGTGGAAGCAGAAAAGAATCCC GCCCTGCTGGAAAAGTCCTACGATAACAAAGAATTTCAGATTGTGATGAACCGCATTGCCCTGAGCATGAAAAACGATCC CGGCAAATGGACGCGTGTTGCCGCCAAAGTGCGCGGTGTTTCAGAAGAAACAACCACCGGCGTACACCGTCTGTACCATA TGGAAAAAGACGGGTCGCTGCTGTTCCCGGCCATCAACGTCAACGACTCCGTTACCAAGTCCAAATTCGACAACCTGTAC GGTTGCCGTGAATCGCTGGCAGACGGTATCAAACGCGCCACCGATGTGATGATTGCCGGAAAGACCGTTGTGGTGCTGGG CTACGGCGATGTGGGCAAAGGCTGCGCCCATTCCATGCGCGGATTCGGCGCACGGGTGCTTGTAACCGAAATCGATCCCA TCTGCGCGCTGCAGGCCGCCATGGAAGGCTTTGAAGTGGTCACCATGGATGAAGCCGCTCCCGAAGGTGATATCTTTGTG ACGGCCACCGGCAACTTCAAGGTAATTACCGGCGAGCACATGGAACGGATGAAAGATGAAGCCATTGTCTGCAACATCGG CCATTTTGATAACGAAATCGATATGGCTTACCTTGAAGACAGCACCGAATGCTCCTGCCTGAACATCAAACCGCAGGTGG ACAAATGGACGCTGAAGTCCGGCCGTTCCATCATCGTTCTGGCAGAAGGCCGTCTGGTCAACCTCGGCTGCGCCACCGGG CACCCCAGCTTTGTCATGTCCAACAGCTTTACCAATCAGGTGCTGGCACAGCTTGAGCTGGCTTCCAACCCCGATCTGGA GCGCAAGGTCTACATCCTGCCCAAAAAGCTGGATGAAGAAGTGGCCCGTCTGCACCTTGCCCGTCTGGGGGCAAAGCTGA CCACCCTGACCGACGAACAGGCAGAATACATCGGAGTGGACAAAACCGGTCCCTTCAAGCCCGACCACTACCGTTACTAA
Upstream 100 bases:
>100_bases CGGTGCGCCACAGCGAGTTGCAGAACGTGGAAAGAAATCTTTCCATCCATCTGATCGTCGCACAGAACAACAGTTAACCC ATATTTTTTCGGAGAACGTC
Downstream 100 bases:
>100_bases CGGCAGGCGCTGCTGTGCAGCGCACCGTCATATGGTATCATACCGGCCGCCCCGCTTTTGCGGGGCGGCTTTTTTAGTGC GCGGTCCCATTTTTTGTCAG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MTDARKALPLDLSLENKVKDLSQADFGYKEMQLSEREMPGLMELIAKHGAEKPLKGLKVTGSLHMTIQTAMLIKTLYELG ADIRWASCNIFSTQDHAAAAIADSGMAKVFAWKGETLEEYWWCTEMALTWPDGSGPDLIVDDGGDATMLIHKGVEAEKNP ALLEKSYDNKEFQIVMNRIALSMKNDPGKWTRVAAKVRGVSEETTTGVHRLYHMEKDGSLLFPAINVNDSVTKSKFDNLY GCRESLADGIKRATDVMIAGKTVVVLGYGDVGKGCAHSMRGFGARVLVTEIDPICALQAAMEGFEVVTMDEAAPEGDIFV TATGNFKVITGEHMERMKDEAIVCNIGHFDNEIDMAYLEDSTECSCLNIKPQVDKWTLKSGRSIIVLAEGRLVNLGCATG HPSFVMSNSFTNQVLAQLELASNPDLERKVYILPKKLDEEVARLHLARLGAKLTTLTDEQAEYIGVDKTGPFKPDHYRY
Sequences:
>Translated_479_residues MTDARKALPLDLSLENKVKDLSQADFGYKEMQLSEREMPGLMELIAKHGAEKPLKGLKVTGSLHMTIQTAMLIKTLYELG ADIRWASCNIFSTQDHAAAAIADSGMAKVFAWKGETLEEYWWCTEMALTWPDGSGPDLIVDDGGDATMLIHKGVEAEKNP ALLEKSYDNKEFQIVMNRIALSMKNDPGKWTRVAAKVRGVSEETTTGVHRLYHMEKDGSLLFPAINVNDSVTKSKFDNLY GCRESLADGIKRATDVMIAGKTVVVLGYGDVGKGCAHSMRGFGARVLVTEIDPICALQAAMEGFEVVTMDEAAPEGDIFV TATGNFKVITGEHMERMKDEAIVCNIGHFDNEIDMAYLEDSTECSCLNIKPQVDKWTLKSGRSIIVLAEGRLVNLGCATG HPSFVMSNSFTNQVLAQLELASNPDLERKVYILPKKLDEEVARLHLARLGAKLTTLTDEQAEYIGVDKTGPFKPDHYRY >Mature_478_residues TDARKALPLDLSLENKVKDLSQADFGYKEMQLSEREMPGLMELIAKHGAEKPLKGLKVTGSLHMTIQTAMLIKTLYELGA DIRWASCNIFSTQDHAAAAIADSGMAKVFAWKGETLEEYWWCTEMALTWPDGSGPDLIVDDGGDATMLIHKGVEAEKNPA LLEKSYDNKEFQIVMNRIALSMKNDPGKWTRVAAKVRGVSEETTTGVHRLYHMEKDGSLLFPAINVNDSVTKSKFDNLYG CRESLADGIKRATDVMIAGKTVVVLGYGDVGKGCAHSMRGFGARVLVTEIDPICALQAAMEGFEVVTMDEAAPEGDIFVT ATGNFKVITGEHMERMKDEAIVCNIGHFDNEIDMAYLEDSTECSCLNIKPQVDKWTLKSGRSIIVLAEGRLVNLGCATGH PSFVMSNSFTNQVLAQLELASNPDLERKVYILPKKLDEEVARLHLARLGAKLTTLTDEQAEYIGVDKTGPFKPDHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family
Homologues:
Organism=Homo sapiens, GI9951915, Length=467, Percent_Identity=61.0278372591007, Blast_Score=544, Evalue=1e-155, Organism=Homo sapiens, GI239937451, Length=443, Percent_Identity=62.3024830699774, Blast_Score=528, Evalue=1e-150, Organism=Homo sapiens, GI298286489, Length=464, Percent_Identity=48.4913793103448, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI24308043, Length=464, Percent_Identity=48.4913793103448, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI195539337, Length=464, Percent_Identity=48.4913793103448, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI195539349, Length=464, Percent_Identity=48.4913793103448, Blast_Score=447, Evalue=1e-126, Organism=Homo sapiens, GI21361647, Length=464, Percent_Identity=47.4137931034483, Blast_Score=431, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17506425, Length=467, Percent_Identity=58.8865096359743, Blast_Score=547, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6320882, Length=479, Percent_Identity=57.6200417536534, Blast_Score=524, Evalue=1e-149, Organism=Drosophila melanogaster, GI24642172, Length=464, Percent_Identity=60.5603448275862, Blast_Score=546, Evalue=1e-155, Organism=Drosophila melanogaster, GI24656245, Length=460, Percent_Identity=48.9130434782609, Blast_Score=437, Evalue=1e-123, Organism=Drosophila melanogaster, GI45553387, Length=463, Percent_Identity=49.4600431965443, Blast_Score=426, Evalue=1e-119, Organism=Drosophila melanogaster, GI45553385, Length=462, Percent_Identity=49.3506493506493, Blast_Score=424, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SAHH_DESDG (Q30WL8)
Other databases:
- EMBL: CP000112 - RefSeq: YP_389623.1 - HSSP: P10760 - STRING: Q30WL8 - GeneID: 3758108 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_3134 - NMPDR: fig|207559.3.peg.3734 - eggNOG: COG0499 - HOGENOM: HBG352029 - OMA: VITHDHM - ProtClustDB: PRK05476 - BioCyc: DDES207559:DDE_3134-MONOMER - GO: GO:0005737 - GO: GO:0005488 - HAMAP: MF_00563 - InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 - PANTHER: PTHR23420 - PIRSF: PIRSF001109 - TIGRFAMs: TIGR00936
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD
EC number: =3.3.1.1
Molecular weight: Translated: 52811; Mature: 52680
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00738 ADOHCYASE_1; PS00739 ADOHCYASE_2
Important sites: BINDING 66-66 BINDING 142-142 BINDING 203-203 BINDING 233-233 BINDING 237-237 BINDING 238-238 BINDING 290-290 BINDING 325-325 BINDING 394-394
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDARKALPLDLSLENKVKDLSQADFGYKEMQLSEREMPGLMELIAKHGAEKPLKGLKVT CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEE GSLHMTIQTAMLIKTLYELGADIRWASCNIFSTQDHAAAAIADSGMAKVFAWKGETLEEY CEEEEHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCHHHH WWCTEMALTWPDGSGPDLIVDDGGDATMLIHKGVEAEKNPALLEKSYDNKEFQIVMNRIA HEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHCCCCCCCHHHHHEEHHH LSMKNDPGKWTRVAAKVRGVSEETTTGVHRLYHMEKDGSLLFPAINVNDSVTKSKFDNLY HEECCCCCHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHH GCRESLADGIKRATDVMIAGKTVVVLGYGDVGKGCAHSMRGFGARVLVTEIDPICALQAA HHHHHHHHHHHHHHEEEEECCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHH MEGFEVVTMDEAAPEGDIFVTATGNFKVITGEHMERMKDEAIVCNIGHFDNEIDMAYLED HCCCEEEEECCCCCCCCEEEEECCCEEEEECHHHHHCCCCEEEEECCCCCCCCEEEEECC STECSCLNIKPQVDKWTLKSGRSIIVLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQLEL CCCEEEEECCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCHHHHHHHHHHH ASNPDLERKVYILPKKLDEEVARLHLARLGAKLTTLTDEQAEYIGVDKTGPFKPDHYRY CCCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCHHEEECCCCCCCCCCCCCC >Mature Secondary Structure TDARKALPLDLSLENKVKDLSQADFGYKEMQLSEREMPGLMELIAKHGAEKPLKGLKVT CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEE GSLHMTIQTAMLIKTLYELGADIRWASCNIFSTQDHAAAAIADSGMAKVFAWKGETLEEY CEEEEHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCHHHH WWCTEMALTWPDGSGPDLIVDDGGDATMLIHKGVEAEKNPALLEKSYDNKEFQIVMNRIA HEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHCCCCCCCHHHHHEEHHH LSMKNDPGKWTRVAAKVRGVSEETTTGVHRLYHMEKDGSLLFPAINVNDSVTKSKFDNLY HEECCCCCHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCHHHHHHHHHH GCRESLADGIKRATDVMIAGKTVVVLGYGDVGKGCAHSMRGFGARVLVTEIDPICALQAA HHHHHHHHHHHHHHEEEEECCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHH MEGFEVVTMDEAAPEGDIFVTATGNFKVITGEHMERMKDEAIVCNIGHFDNEIDMAYLED HCCCEEEEECCCCCCCCEEEEECCCEEEEECHHHHHCCCCEEEEECCCCCCCCEEEEECC STECSCLNIKPQVDKWTLKSGRSIIVLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQLEL CCCEEEEECCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCHHHHHHHHHHH ASNPDLERKVYILPKKLDEEVARLHLARLGAKLTTLTDEQAEYIGVDKTGPFKPDHYRY CCCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCHHEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA