| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is buk
Identifier: 78358168
GI number: 78358168
Start: 3121011
End: 3122129
Strand: Reverse
Name: buk
Synonym: Dde_3128
Alternate gene names: 78358168
Gene position: 3122129-3121011 (Counterclockwise)
Preceding gene: 78358169
Following gene: 78358167
Centisome position: 83.7
GC content: 63.36
Gene sequence:
>1119_bases ATGAGTCTGATCCTGACCATTAATCCCGGATCGACAAGCACCAAGATAGCGGTGTTTGCAGCGGAAGAGGAACTTTTTGA ACGTACGGTGGAGCATCCCCATGATGCCTTTTCCGGTCTGGCCGGTGTATACGGGCAGCTGGAAGCGCGGCGGCATGCCG TTCAGACCATGCTGTCCCGGGCCGGTTATGCCGATGCCCGTTTTGATATTGTGGTGGGACGCGGCGGTTTGCTGGCCCCC ATGCACGGTGGTGCATGGCGTGTGAACCAGACCATGCTTGATATTCTGGAATCCGCTGCGCACGGCGAGCATCCTTGTAA TCTCGGCGCACCGCTGGCTCTGGCGTTTGCCCGCAGCCACGGGGCGCACCGGAATGTACAGGCCATCATAGTGGATCCTG TGGTTACGGATGAACTGGACCCCGTGGCCCGTATAGGCGGATTGCCTGAACTGCCGCGCCGTAGCGTGTTTCACGCGCTT TCACAGCGCGCGGCGGCACGCAGGGCAGCGGCACAGCTGGGCATACGTTATGAGGATGGCCGTTTTCTGGTCGGGCATTT CGGGGGTGGCATTTCTGTAGGGGCGCACCGCCACGGCAGAGTGGTGGACGTGAACAACGCGCTGGAAGGAGAAGGGCCTT TTTCACCGGAGCGGACGGGCGGCCTGCCTGTCATGCCCGCTCTGGAGCTGGTACGCAGAGGCGTGTACTCGTTTGAGCGC ATGCGCAGTATTGTGCAGCGCGAAGGAGGCATGTGGGCGCATCTGGGCACCAACGACCTGCGCGAGGTACAGCGCAGGAT GGACGCCGGTGATACCGCAGCGGCGCAGATTTTCGACGCGCTGGCTTACAACAGCGCCAAGGCTCTGTGCGCGCTGTTAC CGGCACTGACCGGCGCGGGGCAGGACGTCCCGTCGGCCCCGCCGGTGGATGCGGTGGTGCTTACAGGCGGAATGGCGCGT TCCGGGCGGTTCATGCAGGCTGTTTCGGACAGGCTGCGCTATCTCGGACCGGTCATAGTGCTGCCCCGTCTGGAAGAGAT GCAGGCACTGGCCATGGGCGGTCTGCGGGTGCTGCGGGGTGAGGAGACCCCCGCGGAATACGGCGGCGGCATGTCCTGA
Upstream 100 bases:
>100_bases GCAGGATTCCTCTTATCGTCCCTTCCCGCGGCGACAGCGACCGCAGCAAACTGTATGCACTGGCTCTGGCAGCCTACATG ACCCGTAAGGAATGCACCGG
Downstream 100 bases:
>100_bases GACTGCGCGGCTTTTTTCAGGGTACAGCAGGCGGGGGCCGCAAGGCTGCCCGCCTGTATACTTGACGTGCGCGGCGTATA GTAGTTTAGTGCTGGCCTTC
Product: butyrate kinase
Products: NA
Alternate protein names: BK; Branched-chain carboxylic acid kinase
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSLILTINPGSTSTKIAVFAAEEELFERTVEHPHDAFSGLAGVYGQLEARRHAVQTMLSRAGYADARFDIVVGRGGLLAP MHGGAWRVNQTMLDILESAAHGEHPCNLGAPLALAFARSHGAHRNVQAIIVDPVVTDELDPVARIGGLPELPRRSVFHAL SQRAAARRAAAQLGIRYEDGRFLVGHFGGGISVGAHRHGRVVDVNNALEGEGPFSPERTGGLPVMPALELVRRGVYSFER MRSIVQREGGMWAHLGTNDLREVQRRMDAGDTAAAQIFDALAYNSAKALCALLPALTGAGQDVPSAPPVDAVVLTGGMAR SGRFMQAVSDRLRYLGPVIVLPRLEEMQALAMGGLRVLRGEETPAEYGGGMS
Sequences:
>Translated_372_residues MSLILTINPGSTSTKIAVFAAEEELFERTVEHPHDAFSGLAGVYGQLEARRHAVQTMLSRAGYADARFDIVVGRGGLLAP MHGGAWRVNQTMLDILESAAHGEHPCNLGAPLALAFARSHGAHRNVQAIIVDPVVTDELDPVARIGGLPELPRRSVFHAL SQRAAARRAAAQLGIRYEDGRFLVGHFGGGISVGAHRHGRVVDVNNALEGEGPFSPERTGGLPVMPALELVRRGVYSFER MRSIVQREGGMWAHLGTNDLREVQRRMDAGDTAAAQIFDALAYNSAKALCALLPALTGAGQDVPSAPPVDAVVLTGGMAR SGRFMQAVSDRLRYLGPVIVLPRLEEMQALAMGGLRVLRGEETPAEYGGGMS >Mature_371_residues SLILTINPGSTSTKIAVFAAEEELFERTVEHPHDAFSGLAGVYGQLEARRHAVQTMLSRAGYADARFDIVVGRGGLLAPM HGGAWRVNQTMLDILESAAHGEHPCNLGAPLALAFARSHGAHRNVQAIIVDPVVTDELDPVARIGGLPELPRRSVFHALS QRAAARRAAAQLGIRYEDGRFLVGHFGGGISVGAHRHGRVVDVNNALEGEGPFSPERTGGLPVMPALELVRRGVYSFERM RSIVQREGGMWAHLGTNDLREVQRRMDAGDTAAAQIFDALAYNSAKALCALLPALTGAGQDVPSAPPVDAVVLTGGMARS GRFMQAVSDRLRYLGPVIVLPRLEEMQALAMGGLRVLRGEETPAEYGGGMS
Specific function: Anaerobic degradation of L-threonine to propionate. [C]
COG id: COG3426
COG function: function code C; Butyrate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): BUK_DESDG (Q30WM4)
Other databases:
- EMBL: CP000112 - RefSeq: YP_389617.1 - ProteinModelPortal: Q30WM4 - SMR: Q30WM4 - STRING: Q30WM4 - GeneID: 3758102 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_3128 - NMPDR: fig|207559.3.peg.3600 - eggNOG: COG3426 - HOGENOM: HBG449785 - OMA: RSIFHAL - ProtClustDB: PRK03011 - BioCyc: DDES207559:DDE_3128-MONOMER - GO: GO:0005737 - HAMAP: MF_00542 - InterPro: IPR000890 - InterPro: IPR011245 - PANTHER: PTHR21060 - PANTHER: PTHR21060:SF3 - PIRSF: PIRSF036458 - PRINTS: PR00471 - TIGRFAMs: TIGR02707
Pfam domain/function: PF00871 Acetate_kinase
EC number: =2.7.2.7
Molecular weight: Translated: 39711; Mature: 39580
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS01075 ACETATE_KINASE_1; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLILTINPGSTSTKIAVFAAEEELFERTVEHPHDAFSGLAGVYGQLEARRHAVQTMLSR CEEEEEECCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGYADARFDIVVGRGGLLAPMHGGAWRVNQTMLDILESAAHGEHPCNLGAPLALAFARSH CCCCCCEEEEEECCCCEEECCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC GAHRNVQAIIVDPVVTDELDPVARIGGLPELPRRSVFHALSQRAAARRAAAQLGIRYEDG CCCCCCEEEEECCHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCC RFLVGHFGGGISVGAHRHGRVVDVNNALEGEGPFSPERTGGLPVMPALELVRRGVYSFER CEEEEECCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH MRSIVQREGGMWAHLGTNDLREVQRRMDAGDTAAAQIFDALAYNSAKALCALLPALTGAG HHHHHHHCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QDVPSAPPVDAVVLTGGMARSGRFMQAVSDRLRYLGPVIVLPRLEEMQALAMGGLRVLRG CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCCCEECC EETPAEYGGGMS CCCCHHCCCCCC >Mature Secondary Structure SLILTINPGSTSTKIAVFAAEEELFERTVEHPHDAFSGLAGVYGQLEARRHAVQTMLSR EEEEEECCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGYADARFDIVVGRGGLLAPMHGGAWRVNQTMLDILESAAHGEHPCNLGAPLALAFARSH CCCCCCEEEEEECCCCEEECCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC GAHRNVQAIIVDPVVTDELDPVARIGGLPELPRRSVFHALSQRAAARRAAAQLGIRYEDG CCCCCCEEEEECCHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCC RFLVGHFGGGISVGAHRHGRVVDVNNALEGEGPFSPERTGGLPVMPALELVRRGVYSFER CEEEEECCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH MRSIVQREGGMWAHLGTNDLREVQRRMDAGDTAAAQIFDALAYNSAKALCALLPALTGAG HHHHHHHCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QDVPSAPPVDAVVLTGGMARSGRFMQAVSDRLRYLGPVIVLPRLEEMQALAMGGLRVLRG CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCCCEECC EETPAEYGGGMS CCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA