| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358149
Identifier: 78358149
GI number: 78358149
Start: 3099442
End: 3100170
Strand: Reverse
Name: 78358149
Synonym: Dde_3109
Alternate gene names: NA
Gene position: 3100170-3099442 (Counterclockwise)
Preceding gene: 78358150
Following gene: 78358148
Centisome position: 83.11
GC content: 61.18
Gene sequence:
>729_bases ATGGAAAGCCATGAAGTGGAATACAGGATAACGGGGGGCGACCTGCAGGTGGTGGAAGTGGAACTGGACCCCGGTGAGAC AGTCATAGCCGAAGCCGGAGCCATGTGCTGGATGGACGGGGACATTGAGTTTGCCGCCCGCATGGGCGACGGTTCCGCGG CGGACGGCGGTTTTTTCGGCAAGCTGCTGGGAGCGGGCAAGCGGCTGGTCACGGGTGAGTCGCTGTTTATGACGCACTTT ACCAATCAGGGGCAGGCAAAGGCCTCCGTGGCTTTTGCCGGTCAGGTGCCGGGGCATGTGGTGCCTGTTGATCTGGCGGA AATCGGCGGCGAGCTTATCTGTCAGCGCGATGCTTTTTTGTGCGCGGCGCGCGGCACCCGCATCGATGTCGCTTTCAGCA AGCGTCTGGGAGCGGGATTTTTCGGTGGTGAAGGATTTGTACTGCAGCGGCTGCGCGGTGACGGTCTGGCCTTTGTGCAT GCGGGCGGCGCCGTGGTGCGCAAGGAACTGCACGGCGGTACGCTGCGGGTGGACACAGGCTGCCTCGTGGCTTTCACACC GGGGGTCAGCTACGATATCGGACTTTCCGGCGGGCTGAAGTCCATGATGTTCGGCGGCGAAGGGGCGTTTCTGGCGGCAT TGTCCGGACACGGTACGGTGTTTTTGCAGAGCATGCCCTTCAACCGTCTTGCCGACCGTATCACGGCACTGATTCCTGAA AAGAAATAA
Upstream 100 bases:
>100_bases GACGGCGCCGGCAGGTGTATAGCAGCGGGAGCATGCGCAAATGGGGCGCGGCATCCAGTAAAGGCAGCATACGCCGGAAA ACGAGATACGGGAGTGCGTG
Downstream 100 bases:
>100_bases CGCGCGCGATATTGCCGCGCATGGTGCATGGGGGATCATGCCATGGAAGAATTCCGGCTGACCGTGCTGCTTGTGGATGC ATTCACCCGCACGCCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MESHEVEYRITGGDLQVVEVELDPGETVIAEAGAMCWMDGDIEFAARMGDGSAADGGFFGKLLGAGKRLVTGESLFMTHF TNQGQAKASVAFAGQVPGHVVPVDLAEIGGELICQRDAFLCAARGTRIDVAFSKRLGAGFFGGEGFVLQRLRGDGLAFVH AGGAVVRKELHGGTLRVDTGCLVAFTPGVSYDIGLSGGLKSMMFGGEGAFLAALSGHGTVFLQSMPFNRLADRITALIPE KK
Sequences:
>Translated_242_residues MESHEVEYRITGGDLQVVEVELDPGETVIAEAGAMCWMDGDIEFAARMGDGSAADGGFFGKLLGAGKRLVTGESLFMTHF TNQGQAKASVAFAGQVPGHVVPVDLAEIGGELICQRDAFLCAARGTRIDVAFSKRLGAGFFGGEGFVLQRLRGDGLAFVH AGGAVVRKELHGGTLRVDTGCLVAFTPGVSYDIGLSGGLKSMMFGGEGAFLAALSGHGTVFLQSMPFNRLADRITALIPE KK >Mature_242_residues MESHEVEYRITGGDLQVVEVELDPGETVIAEAGAMCWMDGDIEFAARMGDGSAADGGFFGKLLGAGKRLVTGESLFMTHF TNQGQAKASVAFAGQVPGHVVPVDLAEIGGELICQRDAFLCAARGTRIDVAFSKRLGAGFFGGEGFVLQRLRGDGLAFVH AGGAVVRKELHGGTLRVDTGCLVAFTPGVSYDIGLSGGLKSMMFGGEGAFLAALSGHGTVFLQSMPFNRLADRITALIPE KK
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 25302; Mature: 25302
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESHEVEYRITGGDLQVVEVELDPGETVIAEAGAMCWMDGDIEFAARMGDGSAADGGFFG CCCCEEEEEEECCCEEEEEEEECCCCEEEECCCEEEEECCCEEEEEEECCCCCCCCCHHH KLLGAGKRLVTGESLFMTHFTNQGQAKASVAFAGQVPGHVVPVDLAEIGGELICQRDAFL HHHHCCCEEEECCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEHHHCCCEEEEECCCEE CAARGTRIDVAFSKRLGAGFFGGEGFVLQRLRGDGLAFVHAGGAVVRKELHGGTLRVDTG EECCCCEEEEEECCCCCCCEECCCCEEEEEECCCCEEEEECCCCEEEHHHCCCEEEEECC CLVAFTPGVSYDIGLSGGLKSMMFGGEGAFLAALSGHGTVFLQSMPFNRLADRITALIPE EEEEECCCCEEEEECCCCCHHEEECCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCC KK CC >Mature Secondary Structure MESHEVEYRITGGDLQVVEVELDPGETVIAEAGAMCWMDGDIEFAARMGDGSAADGGFFG CCCCEEEEEEECCCEEEEEEEECCCCEEEECCCEEEEECCCEEEEEEECCCCCCCCCHHH KLLGAGKRLVTGESLFMTHFTNQGQAKASVAFAGQVPGHVVPVDLAEIGGELICQRDAFL HHHHCCCEEEECCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEHHHCCCEEEEECCCEE CAARGTRIDVAFSKRLGAGFFGGEGFVLQRLRGDGLAFVHAGGAVVRKELHGGTLRVDTG EECCCCEEEEEECCCCCCCEECCCCEEEEEECCCCEEEEECCCCEEEHHHCCCEEEEECC CLVAFTPGVSYDIGLSGGLKSMMFGGEGAFLAALSGHGTVFLQSMPFNRLADRITALIPE EEEEECCCCEEEEECCCCCHHEEECCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCC KK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA