| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358141
Identifier: 78358141
GI number: 78358141
Start: 3089981
End: 3092254
Strand: Reverse
Name: 78358141
Synonym: Dde_3101
Alternate gene names: NA
Gene position: 3092254-3089981 (Counterclockwise)
Preceding gene: 78358148
Following gene: 78358140
Centisome position: 82.9
GC content: 62.88
Gene sequence:
>2274_bases ATGAAGACCAGATTCATACCTTCTGACAGGCCGGCGGGCAACCGGCTTTGCGTCATTTTTGCTCTGGCCGCTCTTTTTCT TGTGCTGCTGCCCGCGGCCGCTGCCGCAGAGAACGGGCGGGTGCTTGTGCTCAACTCCTACCACAGGGGCTTCCAGTGGT CCGATGCTGAAATGTCGGGCATCGAATCATGGTTCGTTGATTCTGACATCAAGCCGCAGCTGCATTTTGAATATATGGAT TCCAAACGGATGGCGCCCGATGTGGCCACCCGTCATATGTTTGTCCTGCTGCGCGAAAAATATTCCAGAGACTATTTCGA CGTGCTCATGGCGGCCGATGACAACGCCTTTGAATTGCTGCGGGCGCACCGTCAGACGCTTTTTCCGGGGGTGCCGCTTG TTTTTTGCGGGGTAAACCTGCAGCACATGCCGCGCGGCAGCATGCCGGAACGCACCACGGGAGTGCTGGAAAGGGTGGAT GTGGAGGGTACGCTTTCGCTGGCGCTTTCCATGCATCCGGCCACCCGCAGCGTGGTGTTTGTGGCCGACGGCACCACGAC GGGGCAGCGCATGCTGCATGCCGCACGCGAGGCACGCAGAGGCTTTGCGGGACGGGTGGATTTTACCGAGCTGAACAACC TGCCTGCCCCCAAGCTGCAGGAAGCTCTGCGCCTGCTGCCTTCATCGTCTGTCGTGGTGCTGCTCAGTTTTCTGCGCGAC CGCAACGGCAGGGTGCTTACGGTGGAAGAATGCGTCCGGCTGCTTACGCAGGCTTCTCCTGTTCCCGTGTACGGAGTGGG AGCGCAGTTCATCGCCGCAGGGCTTGCGGGCGGCACGCAGCTTTCGGGTACCGAGCACGGGAGGCAGGCGGCACGGCTGG CGGAGCAGATTCTGCGCGGGGCCGACCCCTCAGAGTTGTCCATAATTGCGGAAACCCCTGTGACGGCGGTGCTTGACTAC CGACAGCTTTCGCGTTTCGGGGTGTCTCTGCCCGACCTGCCCGATGGTGTGATAGTGCGTAACCTGCCGCAGGGCAGTCC TTCTGTGTGGTGGTACGGCGCGGGGCTGGCAGCTGCTGCCGCCATGGCGCTGTTGTTCAGGCACTGGCGCAACCGGCGGT GCATGCCCGCCTGCGAAGATTCGGCAACGGCCCTTGGCGGGGTGCTGGCAGCCATGCAGCATATGAACGATATCTGTCTG CTGCTTGATACCGCCGGCCGCATAGCGGCCATGAACCGTCCGGCGGAACAGGCATCGGGCATTGATTCGCATGCGGCGGA GGGAATGCTGCCCGAGGCCGTGCTGCCCATGCTTGCCGGTGCGCTTGAAAAGCTCAGGCGCGGGCTGCAGCACAATGACG AATTTTGCCTGCTGCAGGCCGAAGCCCGCATGGATAACGGGCTGCGCCGGTTTGATCTGGAAGCGTCGAGCCTGCTGCCT GTTGCCGCCGGCGCGTTGCTGGTGCTGCGCGATGTGACAGACAGAGCCGTTCTGGAGGCTGCAGCCGTGGGGGTGCACCG TCTTTCGCTGGTTACCAGAATGGTGTCGGGCATGTGTCACGGAGCAAAGGAACCGCTTTCTGCCGTGGTGCAGAATGCCG AAGAGCTGCACGAGGTGCTGTTTGAAGACACCGAGGGTAATGCCAGAGCTGCAGCGCGCTGCGGGTGCAGCCTGAGTGCG CTGCGCGGTTATCTGGGTGAGCGGGATGTGCCCCGGCGTGTCGGTCTGCTGCGGGCCGCCGGTGCGGAGCTTACGGGCAT AGTGTCCAGACTGCCCAATGCGGAACGGCGCAGTCCTGAACGGCCCATGCCGCTCAAGGATGTGGTGGACAACGCCCTGC GTCTGGGCAGGGACGACCCGCGCCTGCGTGAGTACGGTATGGGGCGCGTGGGCTGGCGCATCGAGGCGGACGGCGCGGAC TCTGTGCAGATAATCAGGGCGGCGGATGCGGAACTTGTGGTATATGAGATGATAACCCTCGGGCTGTATGCCCTGATGTC GGGAGAGGCTTCTCCCGGGGGGGTGCTGGTGCAGTACGGGGCAACCCCCCGCGGAGGGCGGGTGGTGCTGACCGCTTCGG GCTGCAGCCGCCCCGTGGATATCGCCAAACTGCTGCGCAGCGAGCGTATGTTCGGCGGCAGCGGTGGTGAGATGAGCGGA TACGAGGGGTTTGCTCTTGCCACGCGCATTGCGGAGCACAGATTTGGCGCCCCGCTGAAAGTTGAATCGCCGGAAAACGA TGTGCGCATCGAATTCATGCTGAATCAGGAGTAG
Upstream 100 bases:
>100_bases CCGTTGCGGGGCTGCCGGATGAAGCCTGTTTGACAGAAAACAGCACCCGTGGTGTAGTTTCAGCTTATTTGCAGGTATTG CAAAAGGATCGTCTGACAGC
Downstream 100 bases:
>100_bases CGCACACGCGCCGCGTCAATGTCCGGCCGGGCCGGGGGAGCTATGGCACAGACCAAAATACTGCTGGAGTCGGGAACAAA CGAGCTGGAGGTCATCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Sensory Box Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Ntr Family Two-Component System Sensory/Regulatory Protein; Diguanylate Cyclase/Phosphodiesterase; Metal Dependent Phosphohydrolase; Sensory Box/GGDEF Family Protein; Histidine Kinase; PAS Sensor Protein; Diguanylate Cyclase; Signal Transduction Histidine Kinase; PAS/PAC Sensor Protein; Two-Component Hybrid Sensor And Regulator; GGDEF Domain-Containing Protein; Two-Component Sensor Histidine Kinase; Two Component Sensor Histidine Kinase; Sensor Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase With PAS/PAC Sensor; Two-Component Hybrid Histidine Kinase Sensor And Regulator; Hipothetical Sensory Box/GGDEF Family Protein; Sensory Box Histidine Kinase/Response Regulator; Two Component Sensor Kinase; Membrane Associated Signaling Protein; Two-Component System Sensory/Regulatory Protein; Sensory Histidine Kinase; Sensory Box Protein; Signal Transduction Protein; Pentapeptide Repeat-Containing Protein; Two-Component Sensor Kinase; GGDEF-Domain-Containing Signaling Protein; Signaling Protein; Sensor Histidine Kinase Of Two-Component System; PAS Fold Family Protein; Two Component Response Regulator; Sensor Histidine Kinase Response Regulator
Number of amino acids: Translated: 757; Mature: 757
Protein sequence:
>757_residues MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRGFQWSDAEMSGIESWFVDSDIKPQLHFEYMD SKRMAPDVATRHMFVLLREKYSRDYFDVLMAADDNAFELLRAHRQTLFPGVPLVFCGVNLQHMPRGSMPERTTGVLERVD VEGTLSLALSMHPATRSVVFVADGTTTGQRMLHAAREARRGFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRD RNGRVLTVEECVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRGADPSELSIIAETPVTAVLDY RQLSRFGVSLPDLPDGVIVRNLPQGSPSVWWYGAGLAAAAAMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICL LLDTAGRIAAMNRPAEQASGIDSHAAEGMLPEAVLPMLAGALEKLRRGLQHNDEFCLLQAEARMDNGLRRFDLEASSLLP VAAGALLVLRDVTDRAVLEAAAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVLFEDTEGNARAAARCGCSLSA LRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPERPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGAD SVQIIRAADAELVVYEMITLGLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVDIAKLLRSERMFGGSGGEMSG YEGFALATRIAEHRFGAPLKVESPENDVRIEFMLNQE
Sequences:
>Translated_757_residues MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRGFQWSDAEMSGIESWFVDSDIKPQLHFEYMD SKRMAPDVATRHMFVLLREKYSRDYFDVLMAADDNAFELLRAHRQTLFPGVPLVFCGVNLQHMPRGSMPERTTGVLERVD VEGTLSLALSMHPATRSVVFVADGTTTGQRMLHAAREARRGFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRD RNGRVLTVEECVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRGADPSELSIIAETPVTAVLDY RQLSRFGVSLPDLPDGVIVRNLPQGSPSVWWYGAGLAAAAAMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICL LLDTAGRIAAMNRPAEQASGIDSHAAEGMLPEAVLPMLAGALEKLRRGLQHNDEFCLLQAEARMDNGLRRFDLEASSLLP VAAGALLVLRDVTDRAVLEAAAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVLFEDTEGNARAAARCGCSLSA LRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPERPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGAD SVQIIRAADAELVVYEMITLGLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVDIAKLLRSERMFGGSGGEMSG YEGFALATRIAEHRFGAPLKVESPENDVRIEFMLNQE >Mature_757_residues MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRGFQWSDAEMSGIESWFVDSDIKPQLHFEYMD SKRMAPDVATRHMFVLLREKYSRDYFDVLMAADDNAFELLRAHRQTLFPGVPLVFCGVNLQHMPRGSMPERTTGVLERVD VEGTLSLALSMHPATRSVVFVADGTTTGQRMLHAAREARRGFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRD RNGRVLTVEECVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRGADPSELSIIAETPVTAVLDY RQLSRFGVSLPDLPDGVIVRNLPQGSPSVWWYGAGLAAAAAMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICL LLDTAGRIAAMNRPAEQASGIDSHAAEGMLPEAVLPMLAGALEKLRRGLQHNDEFCLLQAEARMDNGLRRFDLEASSLLP VAAGALLVLRDVTDRAVLEAAAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVLFEDTEGNARAAARCGCSLSA LRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPERPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGAD SVQIIRAADAELVVYEMITLGLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVDIAKLLRSERMFGGSGGEMSG YEGFALATRIAEHRFGAPLKVESPENDVRIEFMLNQE
Specific function: Unknown
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82154; Mature: 82154
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRGFQWSDAEMSG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHH IESWFVDSDIKPQLHFEYMDSKRMAPDVATRHMFVLLREKYSRDYFDVLMAADDNAFELL HHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHH RAHRQTLFPGVPLVFCGVNLQHMPRGSMPERTTGVLERVDVEGTLSLALSMHPATRSVVF HHHHHHHCCCCCEEEECCCHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCEEEE VADGTTTGQRMLHAAREARRGFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRD EECCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHC RNGRVLTVEECVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRG CCCCEEEHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC ADPSELSIIAETPVTAVLDYRQLSRFGVSLPDLPDGVIVRNLPQGSPSVWWYGAGLAAAA CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEECCHHHHHH AMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICLLLDTAGRIAAMNRPAEQASG HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCHHHHCC IDSHAAEGMLPEAVLPMLAGALEKLRRGLQHNDEFCLLQAEARMDNGLRRFDLEASSLLP CCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCEEECCCHHHHHH VAAGALLVLRDVTDRAVLEAAAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHH FEDTEGNARAAARCGCSLSALRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPE HCCCCCCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHCCCC RPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGADSVQIIRAADAELVVYEMITL CCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHH GLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVDIAKLLRSERMFGGSGGEMSG HHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC YEGFALATRIAEHRFGAPLKVESPENDVRIEFMLNQE CCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCC >Mature Secondary Structure MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRGFQWSDAEMSG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHH IESWFVDSDIKPQLHFEYMDSKRMAPDVATRHMFVLLREKYSRDYFDVLMAADDNAFELL HHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHH RAHRQTLFPGVPLVFCGVNLQHMPRGSMPERTTGVLERVDVEGTLSLALSMHPATRSVVF HHHHHHHCCCCCEEEECCCHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCEEEE VADGTTTGQRMLHAAREARRGFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRD EECCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHC RNGRVLTVEECVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRG CCCCEEEHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC ADPSELSIIAETPVTAVLDYRQLSRFGVSLPDLPDGVIVRNLPQGSPSVWWYGAGLAAAA CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEECCHHHHHH AMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICLLLDTAGRIAAMNRPAEQASG HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCHHHHCC IDSHAAEGMLPEAVLPMLAGALEKLRRGLQHNDEFCLLQAEARMDNGLRRFDLEASSLLP CCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCEEECCCHHHHHH VAAGALLVLRDVTDRAVLEAAAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHH FEDTEGNARAAARCGCSLSALRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPE HCCCCCCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHCCCC RPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGADSVQIIRAADAELVVYEMITL CCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHH GLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVDIAKLLRSERMFGGSGGEMSG HHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC YEGFALATRIAEHRFGAPLKVESPENDVRIEFMLNQE CCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA