Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358141

Identifier: 78358141

GI number: 78358141

Start: 3089981

End: 3092254

Strand: Reverse

Name: 78358141

Synonym: Dde_3101

Alternate gene names: NA

Gene position: 3092254-3089981 (Counterclockwise)

Preceding gene: 78358148

Following gene: 78358140

Centisome position: 82.9

GC content: 62.88

Gene sequence:

>2274_bases
ATGAAGACCAGATTCATACCTTCTGACAGGCCGGCGGGCAACCGGCTTTGCGTCATTTTTGCTCTGGCCGCTCTTTTTCT
TGTGCTGCTGCCCGCGGCCGCTGCCGCAGAGAACGGGCGGGTGCTTGTGCTCAACTCCTACCACAGGGGCTTCCAGTGGT
CCGATGCTGAAATGTCGGGCATCGAATCATGGTTCGTTGATTCTGACATCAAGCCGCAGCTGCATTTTGAATATATGGAT
TCCAAACGGATGGCGCCCGATGTGGCCACCCGTCATATGTTTGTCCTGCTGCGCGAAAAATATTCCAGAGACTATTTCGA
CGTGCTCATGGCGGCCGATGACAACGCCTTTGAATTGCTGCGGGCGCACCGTCAGACGCTTTTTCCGGGGGTGCCGCTTG
TTTTTTGCGGGGTAAACCTGCAGCACATGCCGCGCGGCAGCATGCCGGAACGCACCACGGGAGTGCTGGAAAGGGTGGAT
GTGGAGGGTACGCTTTCGCTGGCGCTTTCCATGCATCCGGCCACCCGCAGCGTGGTGTTTGTGGCCGACGGCACCACGAC
GGGGCAGCGCATGCTGCATGCCGCACGCGAGGCACGCAGAGGCTTTGCGGGACGGGTGGATTTTACCGAGCTGAACAACC
TGCCTGCCCCCAAGCTGCAGGAAGCTCTGCGCCTGCTGCCTTCATCGTCTGTCGTGGTGCTGCTCAGTTTTCTGCGCGAC
CGCAACGGCAGGGTGCTTACGGTGGAAGAATGCGTCCGGCTGCTTACGCAGGCTTCTCCTGTTCCCGTGTACGGAGTGGG
AGCGCAGTTCATCGCCGCAGGGCTTGCGGGCGGCACGCAGCTTTCGGGTACCGAGCACGGGAGGCAGGCGGCACGGCTGG
CGGAGCAGATTCTGCGCGGGGCCGACCCCTCAGAGTTGTCCATAATTGCGGAAACCCCTGTGACGGCGGTGCTTGACTAC
CGACAGCTTTCGCGTTTCGGGGTGTCTCTGCCCGACCTGCCCGATGGTGTGATAGTGCGTAACCTGCCGCAGGGCAGTCC
TTCTGTGTGGTGGTACGGCGCGGGGCTGGCAGCTGCTGCCGCCATGGCGCTGTTGTTCAGGCACTGGCGCAACCGGCGGT
GCATGCCCGCCTGCGAAGATTCGGCAACGGCCCTTGGCGGGGTGCTGGCAGCCATGCAGCATATGAACGATATCTGTCTG
CTGCTTGATACCGCCGGCCGCATAGCGGCCATGAACCGTCCGGCGGAACAGGCATCGGGCATTGATTCGCATGCGGCGGA
GGGAATGCTGCCCGAGGCCGTGCTGCCCATGCTTGCCGGTGCGCTTGAAAAGCTCAGGCGCGGGCTGCAGCACAATGACG
AATTTTGCCTGCTGCAGGCCGAAGCCCGCATGGATAACGGGCTGCGCCGGTTTGATCTGGAAGCGTCGAGCCTGCTGCCT
GTTGCCGCCGGCGCGTTGCTGGTGCTGCGCGATGTGACAGACAGAGCCGTTCTGGAGGCTGCAGCCGTGGGGGTGCACCG
TCTTTCGCTGGTTACCAGAATGGTGTCGGGCATGTGTCACGGAGCAAAGGAACCGCTTTCTGCCGTGGTGCAGAATGCCG
AAGAGCTGCACGAGGTGCTGTTTGAAGACACCGAGGGTAATGCCAGAGCTGCAGCGCGCTGCGGGTGCAGCCTGAGTGCG
CTGCGCGGTTATCTGGGTGAGCGGGATGTGCCCCGGCGTGTCGGTCTGCTGCGGGCCGCCGGTGCGGAGCTTACGGGCAT
AGTGTCCAGACTGCCCAATGCGGAACGGCGCAGTCCTGAACGGCCCATGCCGCTCAAGGATGTGGTGGACAACGCCCTGC
GTCTGGGCAGGGACGACCCGCGCCTGCGTGAGTACGGTATGGGGCGCGTGGGCTGGCGCATCGAGGCGGACGGCGCGGAC
TCTGTGCAGATAATCAGGGCGGCGGATGCGGAACTTGTGGTATATGAGATGATAACCCTCGGGCTGTATGCCCTGATGTC
GGGAGAGGCTTCTCCCGGGGGGGTGCTGGTGCAGTACGGGGCAACCCCCCGCGGAGGGCGGGTGGTGCTGACCGCTTCGG
GCTGCAGCCGCCCCGTGGATATCGCCAAACTGCTGCGCAGCGAGCGTATGTTCGGCGGCAGCGGTGGTGAGATGAGCGGA
TACGAGGGGTTTGCTCTTGCCACGCGCATTGCGGAGCACAGATTTGGCGCCCCGCTGAAAGTTGAATCGCCGGAAAACGA
TGTGCGCATCGAATTCATGCTGAATCAGGAGTAG

Upstream 100 bases:

>100_bases
CCGTTGCGGGGCTGCCGGATGAAGCCTGTTTGACAGAAAACAGCACCCGTGGTGTAGTTTCAGCTTATTTGCAGGTATTG
CAAAAGGATCGTCTGACAGC

Downstream 100 bases:

>100_bases
CGCACACGCGCCGCGTCAATGTCCGGCCGGGCCGGGGGAGCTATGGCACAGACCAAAATACTGCTGGAGTCGGGAACAAA
CGAGCTGGAGGTCATCGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Sensory Box Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Ntr Family Two-Component System Sensory/Regulatory Protein; Diguanylate Cyclase/Phosphodiesterase; Metal Dependent Phosphohydrolase; Sensory Box/GGDEF Family Protein; Histidine Kinase; PAS Sensor Protein; Diguanylate Cyclase; Signal Transduction Histidine Kinase; PAS/PAC Sensor Protein; Two-Component Hybrid Sensor And Regulator; GGDEF Domain-Containing Protein; Two-Component Sensor Histidine Kinase; Two Component Sensor Histidine Kinase; Sensor Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase With PAS/PAC Sensor; Two-Component Hybrid Histidine Kinase Sensor And Regulator; Hipothetical Sensory Box/GGDEF Family Protein; Sensory Box Histidine Kinase/Response Regulator; Two Component Sensor Kinase; Membrane Associated Signaling Protein; Two-Component System Sensory/Regulatory Protein; Sensory Histidine Kinase; Sensory Box Protein; Signal Transduction Protein; Pentapeptide Repeat-Containing Protein; Two-Component Sensor Kinase; GGDEF-Domain-Containing Signaling Protein; Signaling Protein; Sensor Histidine Kinase Of Two-Component System; PAS Fold Family Protein; Two Component Response Regulator; Sensor Histidine Kinase Response Regulator

Number of amino acids: Translated: 757; Mature: 757

Protein sequence:

>757_residues
MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRGFQWSDAEMSGIESWFVDSDIKPQLHFEYMD
SKRMAPDVATRHMFVLLREKYSRDYFDVLMAADDNAFELLRAHRQTLFPGVPLVFCGVNLQHMPRGSMPERTTGVLERVD
VEGTLSLALSMHPATRSVVFVADGTTTGQRMLHAAREARRGFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRD
RNGRVLTVEECVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRGADPSELSIIAETPVTAVLDY
RQLSRFGVSLPDLPDGVIVRNLPQGSPSVWWYGAGLAAAAAMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICL
LLDTAGRIAAMNRPAEQASGIDSHAAEGMLPEAVLPMLAGALEKLRRGLQHNDEFCLLQAEARMDNGLRRFDLEASSLLP
VAAGALLVLRDVTDRAVLEAAAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVLFEDTEGNARAAARCGCSLSA
LRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPERPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGAD
SVQIIRAADAELVVYEMITLGLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVDIAKLLRSERMFGGSGGEMSG
YEGFALATRIAEHRFGAPLKVESPENDVRIEFMLNQE

Sequences:

>Translated_757_residues
MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRGFQWSDAEMSGIESWFVDSDIKPQLHFEYMD
SKRMAPDVATRHMFVLLREKYSRDYFDVLMAADDNAFELLRAHRQTLFPGVPLVFCGVNLQHMPRGSMPERTTGVLERVD
VEGTLSLALSMHPATRSVVFVADGTTTGQRMLHAAREARRGFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRD
RNGRVLTVEECVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRGADPSELSIIAETPVTAVLDY
RQLSRFGVSLPDLPDGVIVRNLPQGSPSVWWYGAGLAAAAAMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICL
LLDTAGRIAAMNRPAEQASGIDSHAAEGMLPEAVLPMLAGALEKLRRGLQHNDEFCLLQAEARMDNGLRRFDLEASSLLP
VAAGALLVLRDVTDRAVLEAAAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVLFEDTEGNARAAARCGCSLSA
LRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPERPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGAD
SVQIIRAADAELVVYEMITLGLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVDIAKLLRSERMFGGSGGEMSG
YEGFALATRIAEHRFGAPLKVESPENDVRIEFMLNQE
>Mature_757_residues
MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRGFQWSDAEMSGIESWFVDSDIKPQLHFEYMD
SKRMAPDVATRHMFVLLREKYSRDYFDVLMAADDNAFELLRAHRQTLFPGVPLVFCGVNLQHMPRGSMPERTTGVLERVD
VEGTLSLALSMHPATRSVVFVADGTTTGQRMLHAAREARRGFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRD
RNGRVLTVEECVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRGADPSELSIIAETPVTAVLDY
RQLSRFGVSLPDLPDGVIVRNLPQGSPSVWWYGAGLAAAAAMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICL
LLDTAGRIAAMNRPAEQASGIDSHAAEGMLPEAVLPMLAGALEKLRRGLQHNDEFCLLQAEARMDNGLRRFDLEASSLLP
VAAGALLVLRDVTDRAVLEAAAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVLFEDTEGNARAAARCGCSLSA
LRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPERPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGAD
SVQIIRAADAELVVYEMITLGLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVDIAKLLRSERMFGGSGGEMSG
YEGFALATRIAEHRFGAPLKVESPENDVRIEFMLNQE

Specific function: Unknown

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82154; Mature: 82154

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRGFQWSDAEMSG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHH
IESWFVDSDIKPQLHFEYMDSKRMAPDVATRHMFVLLREKYSRDYFDVLMAADDNAFELL
HHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHH
RAHRQTLFPGVPLVFCGVNLQHMPRGSMPERTTGVLERVDVEGTLSLALSMHPATRSVVF
HHHHHHHCCCCCEEEECCCHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCEEEE
VADGTTTGQRMLHAAREARRGFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRD
EECCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHC
RNGRVLTVEECVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRG
CCCCEEEHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
ADPSELSIIAETPVTAVLDYRQLSRFGVSLPDLPDGVIVRNLPQGSPSVWWYGAGLAAAA
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEECCHHHHHH
AMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICLLLDTAGRIAAMNRPAEQASG
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCHHHHCC
IDSHAAEGMLPEAVLPMLAGALEKLRRGLQHNDEFCLLQAEARMDNGLRRFDLEASSLLP
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCEEECCCHHHHHH
VAAGALLVLRDVTDRAVLEAAAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHH
FEDTEGNARAAARCGCSLSALRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPE
HCCCCCCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHCCCC
RPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGADSVQIIRAADAELVVYEMITL
CCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHH
GLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVDIAKLLRSERMFGGSGGEMSG
HHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC
YEGFALATRIAEHRFGAPLKVESPENDVRIEFMLNQE
CCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCC
>Mature Secondary Structure
MKTRFIPSDRPAGNRLCVIFALAALFLVLLPAAAAAENGRVLVLNSYHRGFQWSDAEMSG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHH
IESWFVDSDIKPQLHFEYMDSKRMAPDVATRHMFVLLREKYSRDYFDVLMAADDNAFELL
HHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHH
RAHRQTLFPGVPLVFCGVNLQHMPRGSMPERTTGVLERVDVEGTLSLALSMHPATRSVVF
HHHHHHHCCCCCEEEECCCHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCEEEE
VADGTTTGQRMLHAAREARRGFAGRVDFTELNNLPAPKLQEALRLLPSSSVVVLLSFLRD
EECCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHC
RNGRVLTVEECVRLLTQASPVPVYGVGAQFIAAGLAGGTQLSGTEHGRQAARLAEQILRG
CCCCEEEHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
ADPSELSIIAETPVTAVLDYRQLSRFGVSLPDLPDGVIVRNLPQGSPSVWWYGAGLAAAA
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEECCHHHHHH
AMALLFRHWRNRRCMPACEDSATALGGVLAAMQHMNDICLLLDTAGRIAAMNRPAEQASG
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCHHHHCC
IDSHAAEGMLPEAVLPMLAGALEKLRRGLQHNDEFCLLQAEARMDNGLRRFDLEASSLLP
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCEEECCCHHHHHH
VAAGALLVLRDVTDRAVLEAAAVGVHRLSLVTRMVSGMCHGAKEPLSAVVQNAEELHEVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHH
FEDTEGNARAAARCGCSLSALRGYLGERDVPRRVGLLRAAGAELTGIVSRLPNAERRSPE
HCCCCCCCHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHCCCC
RPMPLKDVVDNALRLGRDDPRLREYGMGRVGWRIEADGADSVQIIRAADAELVVYEMITL
CCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHH
GLYALMSGEASPGGVLVQYGATPRGGRVVLTASGCSRPVDIAKLLRSERMFGGSGGEMSG
HHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC
YEGFALATRIAEHRFGAPLKVESPENDVRIEFMLNQE
CCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA