Click here to switch to the map view.

The map label for this gene is ybaZ [H]

Identifier: 78358139

GI number: 78358139

Start: 3088297

End: 3088908

Strand: Direct

Name: ybaZ [H]

Synonym: Dde_3099

Alternate gene names: 78358139

Gene position: 3088297-3088908 (Clockwise)

Preceding gene: 78358137

Following gene: 78358142

Centisome position: 82.79

GC content: 57.84

Gene sequence:

>612_bases
ATGATATTACATAATAAAAATACAAATCAGCACAAAACAGATTCCGTTGGCACGATACTTGGTAGTAGAAGGGCGGGTGT
CTGGTCCACACTCACTGCTCCTTGCCTGCGTTGTACCGGACAAAGTCGCCGGCAGAGGGCAGCATTCGGGTTGCGCCCGA
GCAGTCCGCCCAGTGCGGACACGAGAGAAACCGCGTCACGCAGGCAGTGTGGCGCGTTTTCTTTTGCCCTGCTACAGTAC
ACACGCAGACAGAGGCGGCCCGACGCACTCTGCACAGCATACAGGATTGCACCGTTGGAAAGAACACAGTTCACCGTTGA
GGTAATACGCCAGATAAAAAGCATTCCGGCAGGATACGTGAGCACGTACGGAATGATTGCCGCCATGGCGGGAAACCCGC
GGGCAGCACGGCAGGTGGCCAGAGTGCTGCATAGCTGTTCCGCCCGTGACGCTCTGCCGTGGTACCGCGTCATCAACGCC
GGCGGGAACATATCGCTGCCCCGCGGCGGCGGGTACGAACGTCAGAAAGCCCTGCTGCAGCGGGAGGGCATTGTCTTTGA
CGAAACAGACCGCGTGGACCTGCAGCGTTTTATGTGGACAATGCCGGCATGA

Upstream 100 bases:

>100_bases
ATTCCGCACTGCGTCCGTGATCGCGGACAAAAAAGTATCTTCTCTGCCTCCATGCCATGCAGCGCACCGCGCAAAACAGT
ATTAAAAACACAACAACACT

Downstream 100 bases:

>100_bases
CACGGACCGGCCCTTTGCGCGCGGCAGGATGCAGGCACAAAAAAACCCGCACCGGAACGGTACGGGCCGCAACAGACATA
CACGGAACAGCTCAGCTGTC

Product: methylated-DNA--protein-cysteine methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MILHNKNTNQHKTDSVGTILGSRRAGVWSTLTAPCLRCTGQSRRQRAAFGLRPSSPPSADTRETASRRQCGAFSFALLQY
TRRQRRPDALCTAYRIAPLERTQFTVEVIRQIKSIPAGYVSTYGMIAAMAGNPRAARQVARVLHSCSARDALPWYRVINA
GGNISLPRGGGYERQKALLQREGIVFDETDRVDLQRFMWTMPA

Sequences:

>Translated_203_residues
MILHNKNTNQHKTDSVGTILGSRRAGVWSTLTAPCLRCTGQSRRQRAAFGLRPSSPPSADTRETASRRQCGAFSFALLQY
TRRQRRPDALCTAYRIAPLERTQFTVEVIRQIKSIPAGYVSTYGMIAAMAGNPRAARQVARVLHSCSARDALPWYRVINA
GGNISLPRGGGYERQKALLQREGIVFDETDRVDLQRFMWTMPA
>Mature_203_residues
MILHNKNTNQHKTDSVGTILGSRRAGVWSTLTAPCLRCTGQSRRQRAAFGLRPSSPPSADTRETASRRQCGAFSFALLQY
TRRQRRPDALCTAYRIAPLERTQFTVEVIRQIKSIPAGYVSTYGMIAAMAGNPRAARQVARVLHSCSARDALPWYRVINA
GGNISLPRGGGYERQKALLQREGIVFDETDRVDLQRFMWTMPA

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=97, Percent_Identity=44.3298969072165, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 22669; Mature: 22669

Theoretical pI: Translated: 11.56; Mature: 11.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILHNKNTNQHKTDSVGTILGSRRAGVWSTLTAPCLRCTGQSRRQRAAFGLRPSSPPSAD
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC
TRETASRRQCGAFSFALLQYTRRQRRPDALCTAYRIAPLERTQFTVEVIRQIKSIPAGYV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH
STYGMIAAMAGNPRAARQVARVLHSCSARDALPWYRVINAGGNISLPRGGGYERQKALLQ
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCCCHHHHHHHHH
REGIVFDETDRVDLQRFMWTMPA
HCCCEECCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MILHNKNTNQHKTDSVGTILGSRRAGVWSTLTAPCLRCTGQSRRQRAAFGLRPSSPPSAD
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC
TRETASRRQCGAFSFALLQYTRRQRRPDALCTAYRIAPLERTQFTVEVIRQIKSIPAGYV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH
STYGMIAAMAGNPRAARQVARVLHSCSARDALPWYRVINAGGNISLPRGGGYERQKALLQ
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCCCHHHHHHHHH
REGIVFDETDRVDLQRFMWTMPA
HCCCEECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]