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The map label for this gene is ybiW [H]

Identifier: 78358095

GI number: 78358095

Start: 3045457

End: 3047892

Strand: Direct

Name: ybiW [H]

Synonym: Dde_3055

Alternate gene names: 78358095

Gene position: 3045457-3047892 (Clockwise)

Preceding gene: 78358094

Following gene: 78358097

Centisome position: 81.64

GC content: 54.15

Gene sequence:

>2436_bases
ATGAAGAACGTTGAAAAAGTCCAATACAACAAGTATGAGGATCGCTCTCGTGGTAACGTGATGTGGGATGTTTTGAACCC
TCTGCGTTACTCCCAGTCTATGTCTATGTCGCGCGCGCAGCTTCTTATGGAAAGCTACAAGGAAACGGAAAGCTTGCATT
TCTTCCGCAGACGCGGCAAGGCCATTCGCAAAATCCTTCAGGAAATGCCCATCCGTATTGATGACCATCAGCTGCTTTGC
GGTGACTTCAGCGCCAAGCCGATGGGCCCCGAATTCTTCCCCGATCTGGCTGCAACCTGGATTGTAGACTACATCGACAA
CTATGGTGTGGAAGGCAGAAAGGGCTTCTTCAGGTGGGAAGATGAAGAGCAGATGGAAATCGGCAGATCCATCGGTGAAT
ATTTCAGAGAAACAGGCGGAAAGGAAAAGTGGATTGCCTTCCTCGGTGACGAAGAAGCCGCTTTGGAACACAAGATCGGT
GAAGCCGGTTCCTGGATCGTGAACACTGTTTCTGAAATGTTTGCTGAAAAAGCATGGAACTGCCCCGACCTTGACCGTCT
GGTGAAAAGAGGCGTCCGCGGCTTGATCGCAGATATCGACGAGCAACTCGAAAAATTCGTAATGATTACCTACGAAGACT
ATCGTCGCCATGAGTTCTGGCTTGGACTCAAGGAAATGCTGCTGGGTGGTATCGATTACGCTCACAGATATCGTGACCTT
GCCACCGAACTGGCAGCCAAGGAAACCGATCCGGTTCGCAAGGCAGAACTGGAAGAGATGGCCCGCGTATGCAACCGCGT
TCCGGAACATCCGGCAGAAACCTTCCAGGAAGCCCTCCAGTCTCTCGTATTCGGTCTGCTCATGGTCTTTTACGATACCC
GTACCTTCGGCATGGGCTATGGCCGTATCGATCAGATCATGTACCCCCAGTACAAGTCTGACATTGCCAGCGGCAAAATC
GACGACGAATATGTTGTCCAGCTGTTCGAATGCTTCCGAGTCAAGATTATGGGTAAGCGCCAGTTCTGGCCCGACGTTAT
GACTCCGAACCTGAGCAGCGAATCCCACTTCCATAACTGCGTTATCTGCGGCGTAGACCCCAAGACCGGCAGAGACGCCA
CCAACGAACTGTCCTTCGCATTCCTGGAAGCCGCAGAGCGTGTAAGAACGACTCACCCGACGATATCCGTGCGTTGGCAC
ACCCAGATCGATCCCAAGTTCATGAAGCGTGCACTGGAAACCGTTAAGCTGGGCATGGGCTTCCCTGCCTTCTTCAACGA
CGAACCCAGCATCCAGTACCTGCTTGCCCGTGGTTACACGATGGAGGAAGCACGCAACTACGCTCTGGGCGGTTGTACCC
TGCACACGGTTCCCGGCAAAACCAGCTCCATCTGGCCTCTGGTTACCAGCTATGGCCGAATCCTTGAGCTTACCATGTAC
AACGGTTGGGATTTCATCTCCAACTCGCAGCTGGGGCCGAAAACCGGCGACTTTACCCAGATGACCTCCTATGAAGAGTT
TGTTGCAGCTTACAAGGCCATGATTGAATACTGGGCAAATGTCAGCACCAAGAGCGGACGTGCAGCAAAGCTCCAGCACG
GCGACACCTTCCCCGATATCATGATGTCTGCCTTCACCGATGACTGCATCGGCCGTGGCAAGGTCTGCAGCCTCGGCGGT
GCAGAACATGCTGACAGCTGCATGTACATAGTGCCCGTAGCCGTGCAGGACGTAGCCAACGAACTGTACGTGCTTAAGCA
CGGCGTGTTTGGCGAAAACCCGATCTGCACCCCGCAGGAAATGCTGGATGCAATGCGCGCCAACTGGGAAGGCCACGAAG
AACTGCGTGCCAAGTGCATGGCTATGCCCAAGTTCGGTAACGACATCCCCGAAGTGGATCAACTGCTGACCGACGTGTAC
AACTGGATCAAGGAAATCTGGCACGCACAGCCTGCAACGGACGGCGGCAGGTATGAAGTATCCCCGCACTCCATCGGCTT
CCACGGTGGAACGGGCGCCAAGACCGGCGCGCTGCCCTGCGGCCGTAAAGCCGGAACTTCCTTCTCCGACGGCGCTGTTT
CCCCTGTACAGGGTACCGACGTGAACGGCCCCTCTGCGGTTATCAAATCCGCAGGCAGCATTGACCAGCATGACCTGTAC
GGCGTGCTCTTCAACATGCGCTTCTCTCCCAGCAACATCAGGGGCGAGAAAGGGACTGCAAACCTGGCCTCCCTTATCAA
GACCTACTTCAGCGACTACAAAGGCAAGCACATTCAGTTCAACGTGCTTAACCGCGACGATCTGATTGCAGCAAAGAAAG
AGCCTGAAAAGTACAAAGACCTCATGGTTCGTGTTGCCGGCTACAGCGCCTACTGGACTGACCTGCCCGCAAACATTCAG
GATGAGCTGATCGCTCGTACTGAGCATGAACTGTAA

Upstream 100 bases:

>100_bases
TGCGGTTCTGTATATCCAGTGCAGTACAGTAGCCTTTTTATAATGGAAACATGCATGTTTGCAGCCAGCTGTAACAACAA
AGGTAGAAGGAGTTAAAGAC

Downstream 100 bases:

>100_bases
TAGCTAGGCTAAAGGCTCATCGGGCGGCACACACTTACGTGTCTTCATAGTGGCAGCCTTGGACTAAGGACTGGAGGCTT
GCAGTCTGCAACGCCTCCGG

Product: formate C-acetyltransferase

Products: NA

Alternate protein names: Pyruvate formate-lyase 3 [H]

Number of amino acids: Translated: 811; Mature: 811

Protein sequence:

>811_residues
MKNVEKVQYNKYEDRSRGNVMWDVLNPLRYSQSMSMSRAQLLMESYKETESLHFFRRRGKAIRKILQEMPIRIDDHQLLC
GDFSAKPMGPEFFPDLAATWIVDYIDNYGVEGRKGFFRWEDEEQMEIGRSIGEYFRETGGKEKWIAFLGDEEAALEHKIG
EAGSWIVNTVSEMFAEKAWNCPDLDRLVKRGVRGLIADIDEQLEKFVMITYEDYRRHEFWLGLKEMLLGGIDYAHRYRDL
ATELAAKETDPVRKAELEEMARVCNRVPEHPAETFQEALQSLVFGLLMVFYDTRTFGMGYGRIDQIMYPQYKSDIASGKI
DDEYVVQLFECFRVKIMGKRQFWPDVMTPNLSSESHFHNCVICGVDPKTGRDATNELSFAFLEAAERVRTTHPTISVRWH
TQIDPKFMKRALETVKLGMGFPAFFNDEPSIQYLLARGYTMEEARNYALGGCTLHTVPGKTSSIWPLVTSYGRILELTMY
NGWDFISNSQLGPKTGDFTQMTSYEEFVAAYKAMIEYWANVSTKSGRAAKLQHGDTFPDIMMSAFTDDCIGRGKVCSLGG
AEHADSCMYIVPVAVQDVANELYVLKHGVFGENPICTPQEMLDAMRANWEGHEELRAKCMAMPKFGNDIPEVDQLLTDVY
NWIKEIWHAQPATDGGRYEVSPHSIGFHGGTGAKTGALPCGRKAGTSFSDGAVSPVQGTDVNGPSAVIKSAGSIDQHDLY
GVLFNMRFSPSNIRGEKGTANLASLIKTYFSDYKGKHIQFNVLNRDDLIAAKKEPEKYKDLMVRVAGYSAYWTDLPANIQ
DELIARTEHEL

Sequences:

>Translated_811_residues
MKNVEKVQYNKYEDRSRGNVMWDVLNPLRYSQSMSMSRAQLLMESYKETESLHFFRRRGKAIRKILQEMPIRIDDHQLLC
GDFSAKPMGPEFFPDLAATWIVDYIDNYGVEGRKGFFRWEDEEQMEIGRSIGEYFRETGGKEKWIAFLGDEEAALEHKIG
EAGSWIVNTVSEMFAEKAWNCPDLDRLVKRGVRGLIADIDEQLEKFVMITYEDYRRHEFWLGLKEMLLGGIDYAHRYRDL
ATELAAKETDPVRKAELEEMARVCNRVPEHPAETFQEALQSLVFGLLMVFYDTRTFGMGYGRIDQIMYPQYKSDIASGKI
DDEYVVQLFECFRVKIMGKRQFWPDVMTPNLSSESHFHNCVICGVDPKTGRDATNELSFAFLEAAERVRTTHPTISVRWH
TQIDPKFMKRALETVKLGMGFPAFFNDEPSIQYLLARGYTMEEARNYALGGCTLHTVPGKTSSIWPLVTSYGRILELTMY
NGWDFISNSQLGPKTGDFTQMTSYEEFVAAYKAMIEYWANVSTKSGRAAKLQHGDTFPDIMMSAFTDDCIGRGKVCSLGG
AEHADSCMYIVPVAVQDVANELYVLKHGVFGENPICTPQEMLDAMRANWEGHEELRAKCMAMPKFGNDIPEVDQLLTDVY
NWIKEIWHAQPATDGGRYEVSPHSIGFHGGTGAKTGALPCGRKAGTSFSDGAVSPVQGTDVNGPSAVIKSAGSIDQHDLY
GVLFNMRFSPSNIRGEKGTANLASLIKTYFSDYKGKHIQFNVLNRDDLIAAKKEPEKYKDLMVRVAGYSAYWTDLPANIQ
DELIARTEHEL
>Mature_811_residues
MKNVEKVQYNKYEDRSRGNVMWDVLNPLRYSQSMSMSRAQLLMESYKETESLHFFRRRGKAIRKILQEMPIRIDDHQLLC
GDFSAKPMGPEFFPDLAATWIVDYIDNYGVEGRKGFFRWEDEEQMEIGRSIGEYFRETGGKEKWIAFLGDEEAALEHKIG
EAGSWIVNTVSEMFAEKAWNCPDLDRLVKRGVRGLIADIDEQLEKFVMITYEDYRRHEFWLGLKEMLLGGIDYAHRYRDL
ATELAAKETDPVRKAELEEMARVCNRVPEHPAETFQEALQSLVFGLLMVFYDTRTFGMGYGRIDQIMYPQYKSDIASGKI
DDEYVVQLFECFRVKIMGKRQFWPDVMTPNLSSESHFHNCVICGVDPKTGRDATNELSFAFLEAAERVRTTHPTISVRWH
TQIDPKFMKRALETVKLGMGFPAFFNDEPSIQYLLARGYTMEEARNYALGGCTLHTVPGKTSSIWPLVTSYGRILELTMY
NGWDFISNSQLGPKTGDFTQMTSYEEFVAAYKAMIEYWANVSTKSGRAAKLQHGDTFPDIMMSAFTDDCIGRGKVCSLGG
AEHADSCMYIVPVAVQDVANELYVLKHGVFGENPICTPQEMLDAMRANWEGHEELRAKCMAMPKFGNDIPEVDQLLTDVY
NWIKEIWHAQPATDGGRYEVSPHSIGFHGGTGAKTGALPCGRKAGTSFSDGAVSPVQGTDVNGPSAVIKSAGSIDQHDLY
GVLFNMRFSPSNIRGEKGTANLASLIKTYFSDYKGKHIQFNVLNRDDLIAAKKEPEKYKDLMVRVAGYSAYWTDLPANIQ
DELIARTEHEL

Specific function: Glucose metabolism (nonoxidative conversion). [C]

COG id: COG1882

COG function: function code C; Pyruvate-formate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 pyruvate formate lyase domain [H]

Homologues:

Organism=Escherichia coli, GI1787044, Length=814, Percent_Identity=28.992628992629, Blast_Score=341, Evalue=9e-95,
Organism=Escherichia coli, GI1790388, Length=792, Percent_Identity=28.5353535353535, Blast_Score=322, Evalue=5e-89,
Organism=Escherichia coli, GI1787131, Length=633, Percent_Identity=23.5387045813586, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI48994926, Length=624, Percent_Identity=23.2371794871795, Blast_Score=115, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR004184
- InterPro:   IPR010098 [H]

Pfam domain/function: PF01228 Gly_radical; PF02901 PFL [H]

EC number: =2.3.1.54 [H]

Molecular weight: Translated: 92083; Mature: 92083

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS51149 GLY_RADICAL_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVEKVQYNKYEDRSRGNVMWDVLNPLRYSQSMSMSRAQLLMESYKETESLHFFRRRGK
CCCCHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRKILQEMPIRIDDHQLLCGDFSAKPMGPEFFPDLAATWIVDYIDNYGVEGRKGFFRWE
HHHHHHHHCCCEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DEEQMEIGRSIGEYFRETGGKEKWIAFLGDEEAALEHKIGEAGSWIVNTVSEMFAEKAWN
CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
CPDLDRLVKRGVRGLIADIDEQLEKFVMITYEDYRRHEFWLGLKEMLLGGIDYAHRYRDL
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ATELAAKETDPVRKAELEEMARVCNRVPEHPAETFQEALQSLVFGLLMVFYDTRTFGMGY
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GRIDQIMYPQYKSDIASGKIDDEYVVQLFECFRVKIMGKRQFWPDVMTPNLSSESHFHNC
CHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
VICGVDPKTGRDATNELSFAFLEAAERVRTTHPTISVRWHTQIDPKFMKRALETVKLGMG
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCC
FPAFFNDEPSIQYLLARGYTMEEARNYALGGCTLHTVPGKTSSIWPLVTSYGRILELTMY
CCCCCCCCCCHHHHHHCCCCHHHHCCCEECCEEEEECCCCCCCHHHHHHCCCCEEEEEEE
NGWDFISNSQLGPKTGDFTQMTSYEEFVAAYKAMIEYWANVSTKSGRAAKLQHGDTFPDI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHH
MMSAFTDDCIGRGKVCSLGGAEHADSCMYIVPVAVQDVANELYVLKHGVFGENPICTPQE
HHHHHHHHHCCCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
MLDAMRANWEGHEELRAKCMAMPKFGNDIPEVDQLLTDVYNWIKEIWHAQPATDGGRYEV
HHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
SPHSIGFHGGTGAKTGALPCGRKAGTSFSDGAVSPVQGTDVNGPSAVIKSAGSIDQHDLY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHH
GVLFNMRFSPSNIRGEKGTANLASLIKTYFSDYKGKHIQFNVLNRDDLIAAKKEPEKYKD
EEHEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHH
LMVRVAGYSAYWTDLPANIQDELIARTEHEL
HHHHHHCCCEEECCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKNVEKVQYNKYEDRSRGNVMWDVLNPLRYSQSMSMSRAQLLMESYKETESLHFFRRRGK
CCCCHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRKILQEMPIRIDDHQLLCGDFSAKPMGPEFFPDLAATWIVDYIDNYGVEGRKGFFRWE
HHHHHHHHCCCEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DEEQMEIGRSIGEYFRETGGKEKWIAFLGDEEAALEHKIGEAGSWIVNTVSEMFAEKAWN
CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
CPDLDRLVKRGVRGLIADIDEQLEKFVMITYEDYRRHEFWLGLKEMLLGGIDYAHRYRDL
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ATELAAKETDPVRKAELEEMARVCNRVPEHPAETFQEALQSLVFGLLMVFYDTRTFGMGY
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GRIDQIMYPQYKSDIASGKIDDEYVVQLFECFRVKIMGKRQFWPDVMTPNLSSESHFHNC
CHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
VICGVDPKTGRDATNELSFAFLEAAERVRTTHPTISVRWHTQIDPKFMKRALETVKLGMG
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCC
FPAFFNDEPSIQYLLARGYTMEEARNYALGGCTLHTVPGKTSSIWPLVTSYGRILELTMY
CCCCCCCCCCHHHHHHCCCCHHHHCCCEECCEEEEECCCCCCCHHHHHHCCCCEEEEEEE
NGWDFISNSQLGPKTGDFTQMTSYEEFVAAYKAMIEYWANVSTKSGRAAKLQHGDTFPDI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHH
MMSAFTDDCIGRGKVCSLGGAEHADSCMYIVPVAVQDVANELYVLKHGVFGENPICTPQE
HHHHHHHHHCCCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
MLDAMRANWEGHEELRAKCMAMPKFGNDIPEVDQLLTDVYNWIKEIWHAQPATDGGRYEV
HHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
SPHSIGFHGGTGAKTGALPCGRKAGTSFSDGAVSPVQGTDVNGPSAVIKSAGSIDQHDLY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHH
GVLFNMRFSPSNIRGEKGTANLASLIKTYFSDYKGKHIQFNVLNRDDLIAAKKEPEKYKD
EEHEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHH
LMVRVAGYSAYWTDLPANIQDELIARTEHEL
HHHHHHCCCEEECCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]