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The map label for this gene is ytfL [C]

Identifier: 78358076

GI number: 78358076

Start: 3023767

End: 3025095

Strand: Reverse

Name: ytfL [C]

Synonym: Dde_3036

Alternate gene names: 78358076

Gene position: 3025095-3023767 (Counterclockwise)

Preceding gene: 78358078

Following gene: 78358075

Centisome position: 81.1

GC content: 57.94

Gene sequence:

>1329_bases
GTGGATATTGCCATTCTTGTTGCCCTGATACTTCTTAACGGCGTTTTTGCCATGTCCGAGATAGCCCTTGTCACCGCCCG
CAGAAGCCGTCTGCAAAAAATGGCGGAAGAAGGTGACCGTTCCGCAGCCGTGGCCATCCGGCTGGGTGAAGAGCCTACCC
AGTTTCTTTCCACTGTGCAGATAGGCATAACGGCCATAGGCATACTGAACGGCATAGTGGGAGAAGCCGCACTGGCCGGG
CCTCTTGCCCTGATGCTGCAGAATGCCGGTCTGGAAAGCGGGACAAGCTCGGCCGTGGCAACCACAGTTGTGGTGGCGGG
CATCACCTATTTTTCCATTGTGGCGGGCGAACTGGTGCCCAAACGCATAGCGCAGTTCAATGCCGAAGGCATAGCGCGCA
GCATGGCCAGACCCATAGCCCTGCTGGCCTGTCTGTCGCGTCCGTTTGTGTATCTGCTTTCTGTTTCCACGGATGCCCTG
CTGCGGCTGGTGGGCAAAACTGAACTGAGCAGCGCCAACCTGACCGAGGAGGACATCCACGCCATACTGACGGAAGGTTC
ACAGGCGGGTGTCATCGAAAAACACGAGCATGATATGGTGCGTAATGTCTTTCGTCTTGACGACAGGCAGATTCCTTCGC
TGATGACTCCGCGCAGCGATATTGTGTTTCTGGATATCACGCAGCCGCTTGACGGGTTTCTGGACACAGTGGTGGCCTCT
GATCATTCCCGCTTTCCGGTATGCCGCGGCGGTCTGCACGAGGTGCTGGGCGTCATCAGTGCCAAGCGTCTGCTCAAGCA
GCGGCTGAAAAACGAACCGGCAGAAAAACTGACCGGATATCTGCTGCCGGCTGTGTATGTGCCGGAGTCGCTGACGGGCA
TGAAGCTGCTTGAACAGTTCCGGGAATCCGGTGTGCAGATGGTTTTTGTGGTTGATGAATACGGTGATATTTCCGGTCTG
ATCACGTTGCAGGACCTGCTGGAAGCGCTCACAGGAAAGTTCCGCCCGCGCGATCCGGACGAAATGTGGGCTGTGCAGCG
TGACGACGGTTCGTGGCTGCTGGACGGGCTTATCCCTGTGCCGGAACTGAAGGACAGGCTTGACCTCAAAACCGTGCCCG
ACGAGGCAAAAGTCCGCTATCATACCTTGAGCGGCATGATGATGTGGCTTTTCGGCCGGTTGCCGCGTACAGGTGATGTG
GCGGAGTGGCAGGGCTGGCAGCTGGAAGTTGTGGATCTTGACGGCAAGCGCATCGACAAGGTGCTGGCCAGCAGGATTTC
CGGTTACGAGGCTTCGCAGCCGTCTGCGGCTGGTCCGGACGGGCGCTGA

Upstream 100 bases:

>100_bases
GCACGGTCGTGTGTCGTCACGTGCAGTCCCTGCGGCCGCATGATATCCGTCTGCCTTGCCGGGTACGCTGTCTGGGCAGG
CGGCACAAAGGAGAACACGC

Downstream 100 bases:

>100_bases
TGCGCCGCACTGCGGTTTACGGCTTCAACTGTTGATCACGGAGGTGCAATGCAGCAACCGGACATGCTGCCGCAGTTCAC
ACAGGTGACCTGCAGGTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MDIAILVALILLNGVFAMSEIALVTARRSRLQKMAEEGDRSAAVAIRLGEEPTQFLSTVQIGITAIGILNGIVGEAALAG
PLALMLQNAGLESGTSSAVATTVVVAGITYFSIVAGELVPKRIAQFNAEGIARSMARPIALLACLSRPFVYLLSVSTDAL
LRLVGKTELSSANLTEEDIHAILTEGSQAGVIEKHEHDMVRNVFRLDDRQIPSLMTPRSDIVFLDITQPLDGFLDTVVAS
DHSRFPVCRGGLHEVLGVISAKRLLKQRLKNEPAEKLTGYLLPAVYVPESLTGMKLLEQFRESGVQMVFVVDEYGDISGL
ITLQDLLEALTGKFRPRDPDEMWAVQRDDGSWLLDGLIPVPELKDRLDLKTVPDEAKVRYHTLSGMMMWLFGRLPRTGDV
AEWQGWQLEVVDLDGKRIDKVLASRISGYEASQPSAAGPDGR

Sequences:

>Translated_442_residues
MDIAILVALILLNGVFAMSEIALVTARRSRLQKMAEEGDRSAAVAIRLGEEPTQFLSTVQIGITAIGILNGIVGEAALAG
PLALMLQNAGLESGTSSAVATTVVVAGITYFSIVAGELVPKRIAQFNAEGIARSMARPIALLACLSRPFVYLLSVSTDAL
LRLVGKTELSSANLTEEDIHAILTEGSQAGVIEKHEHDMVRNVFRLDDRQIPSLMTPRSDIVFLDITQPLDGFLDTVVAS
DHSRFPVCRGGLHEVLGVISAKRLLKQRLKNEPAEKLTGYLLPAVYVPESLTGMKLLEQFRESGVQMVFVVDEYGDISGL
ITLQDLLEALTGKFRPRDPDEMWAVQRDDGSWLLDGLIPVPELKDRLDLKTVPDEAKVRYHTLSGMMMWLFGRLPRTGDV
AEWQGWQLEVVDLDGKRIDKVLASRISGYEASQPSAAGPDGR
>Mature_442_residues
MDIAILVALILLNGVFAMSEIALVTARRSRLQKMAEEGDRSAAVAIRLGEEPTQFLSTVQIGITAIGILNGIVGEAALAG
PLALMLQNAGLESGTSSAVATTVVVAGITYFSIVAGELVPKRIAQFNAEGIARSMARPIALLACLSRPFVYLLSVSTDAL
LRLVGKTELSSANLTEEDIHAILTEGSQAGVIEKHEHDMVRNVFRLDDRQIPSLMTPRSDIVFLDITQPLDGFLDTVVAS
DHSRFPVCRGGLHEVLGVISAKRLLKQRLKNEPAEKLTGYLLPAVYVPESLTGMKLLEQFRESGVQMVFVVDEYGDISGL
ITLQDLLEALTGKFRPRDPDEMWAVQRDDGSWLLDGLIPVPELKDRLDLKTVPDEAKVRYHTLSGMMMWLFGRLPRTGDV
AEWQGWQLEVVDLDGKRIDKVLASRISGYEASQPSAAGPDGR

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=366, Percent_Identity=28.4153005464481, Blast_Score=164, Evalue=2e-40,
Organism=Escherichia coli, GI1790664, Length=441, Percent_Identity=30.8390022675737, Blast_Score=252, Evalue=3e-68,
Organism=Escherichia coli, GI145693175, Length=416, Percent_Identity=28.3653846153846, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI87082033, Length=380, Percent_Identity=29.7368421052632, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1788119, Length=267, Percent_Identity=31.0861423220974, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1786879, Length=243, Percent_Identity=30.0411522633745, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48166; Mature: 48166

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIAILVALILLNGVFAMSEIALVTARRSRLQKMAEEGDRSAAVAIRLGEEPTQFLSTVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
IGITAIGILNGIVGEAALAGPLALMLQNAGLESGTSSAVATTVVVAGITYFSIVAGELVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KRIAQFNAEGIARSMARPIALLACLSRPFVYLLSVSTDALLRLVGKTELSSANLTEEDIH
HHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHH
AILTEGSQAGVIEKHEHDMVRNVFRLDDRQIPSLMTPRSDIVFLDITQPLDGFLDTVVAS
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEEECCHHHHHHHHHHHC
DHSRFPVCRGGLHEVLGVISAKRLLKQRLKNEPAEKLTGYLLPAVYVPESLTGMKLLEQF
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
RESGVQMVFVVDEYGDISGLITLQDLLEALTGKFRPRDPDEMWAVQRDDGSWLLDGLIPV
HHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCEEECCCCCC
PELKDRLDLKTVPDEAKVRYHTLSGMMMWLFGRLPRTGDVAEWQGWQLEVVDLDGKRIDK
CHHHHCCCCCCCCCHHHEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHH
VLASRISGYEASQPSAAGPDGR
HHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDIAILVALILLNGVFAMSEIALVTARRSRLQKMAEEGDRSAAVAIRLGEEPTQFLSTVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
IGITAIGILNGIVGEAALAGPLALMLQNAGLESGTSSAVATTVVVAGITYFSIVAGELVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KRIAQFNAEGIARSMARPIALLACLSRPFVYLLSVSTDALLRLVGKTELSSANLTEEDIH
HHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHH
AILTEGSQAGVIEKHEHDMVRNVFRLDDRQIPSLMTPRSDIVFLDITQPLDGFLDTVVAS
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEEECCHHHHHHHHHHHC
DHSRFPVCRGGLHEVLGVISAKRLLKQRLKNEPAEKLTGYLLPAVYVPESLTGMKLLEQF
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
RESGVQMVFVVDEYGDISGLITLQDLLEALTGKFRPRDPDEMWAVQRDDGSWLLDGLIPV
HHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCEEECCCCCC
PELKDRLDLKTVPDEAKVRYHTLSGMMMWLFGRLPRTGDVAEWQGWQLEVVDLDGKRIDK
CHHHHCCCCCCCCCHHHEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHH
VLASRISGYEASQPSAAGPDGR
HHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]