| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358070
Identifier: 78358070
GI number: 78358070
Start: 3017677
End: 3018966
Strand: Direct
Name: 78358070
Synonym: Dde_3030
Alternate gene names: NA
Gene position: 3017677-3018966 (Clockwise)
Preceding gene: 78358069
Following gene: 78358071
Centisome position: 80.9
GC content: 57.6
Gene sequence:
>1290_bases ATGAGTGAAACCATAGCCCTTATCGGTCCGTCCGACTCTGTAACCGTCATGTACGATTCCGTGACGCGGTTTTTTCCCGA CCTGACCTTCAAAACATATGTTCGGGAACTTACGGAAGAGTCGCATCAGGTGCTCGAACAAAGCCAGAGCGAATGCGACG GGCTGCTGTTTGCCGGTATCGGCGTGCAGGAAGCCGCCAAGGCGCGCGGTGTAGTAACCAAACCCCACGCCCACATCGAG CGCGGTGCCTACAGCCTGCTGCGCGCCTACTCCGGCATCCGCAGCAGCGGTATTCCCCATGCGCGCGTCAGTGTCGATGT CATTACCGATACCGTGCTCAACGAAGTCATCCGCGAATATTCCCTGCCCTTCAGCAAAGTATACTCAATGCCCTTTGCGG TTAGATTCCGCGAAGAAGAATACTACGAACGCCACAGACAGCTGCTCGATTCCGGCAAGGCGCAGGCAGCCATGTCCGGC TTCGGCTCTGTGTACCGCCGACTCAAGGAAGAGGGGTATCCCGTTTTCCGCATGCTGCCAAGTTCGCTGCAGATACGCGA AACCACCGAGCGCCTGCTTTCCGACATTGCCACACGCGACCTGCGCTCGGCGGGCATCGCCATACAGATAGTACGCCTGC ACCGCAACGACGAACAGTCCGTCAACGAATACGAGCATATGAAAGATGAAGGCCGTTTTTTTCTGGAACTGCTTGAATAT GTCCGTGCCATTCAGGGCAGTCTGTTCAACTTCGGCAAGCGCGAATATGTGATTTTTGCCACGCGGGGCGTCATTGAAAG CCATGTGCATCTGGATATGTTCACCCGGCTCATGGACTGGGCACGGGGCAACAACATGCTCATATCTTCCGGCATAGGCA TAGGCTCCACCGCGTTCGAAGCCGAAAAAACAGCCCGTCTGGCGCTGGCGCACGGCCGCAAGCAACCCCGCGGAGGCGTT TTTCTGGTGCACGGCAACCACATCCGCGGTCCGCTGGGGCAACAGGGCGAGCTGCGCTACCGCACCCGCATCGAAGACAC CACCCTGCTGCGCATGGCTGAAAAAATCGGCATCAGCCCCAGCTATGTGGACCGCATACGGGCCGTCATAGACAAAACAG GCAAAAGCACGTTCGACTCCGGCGATCTGGCTGCCTGTCTGGGCATAGGCGAACGCAGTGCGCGCAGGGTGCTGAAAAAA TTTGTGGACAGCGGCTACGCCACACTGGTGGGCAAGGAGAACGCACATCAGGTCGGCCGCCCGAAAAATCTCGTGAAAAT AGCCATCTGA
Upstream 100 bases:
>100_bases TTGGTCATGACCGAAATACACCGCAGTCCGTCCGCGGCCCCTGCGCACAACGACGCACACCGCTCAGACGCCGCTGCACC GCATATAAGGCGCCGCATCA
Downstream 100 bases:
>100_bases GTAATGGCTTTTCGCGGACAATTTCGGACACGTTTATGACATGGCCATAATGTCCCGAACCAGTAACAGCAAAAGGGAGT ACACACCCGAGGGGAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSETIALIGPSDSVTVMYDSVTRFFPDLTFKTYVRELTEESHQVLEQSQSECDGLLFAGIGVQEAAKARGVVTKPHAHIE RGAYSLLRAYSGIRSSGIPHARVSVDVITDTVLNEVIREYSLPFSKVYSMPFAVRFREEEYYERHRQLLDSGKAQAAMSG FGSVYRRLKEEGYPVFRMLPSSLQIRETTERLLSDIATRDLRSAGIAIQIVRLHRNDEQSVNEYEHMKDEGRFFLELLEY VRAIQGSLFNFGKREYVIFATRGVIESHVHLDMFTRLMDWARGNNMLISSGIGIGSTAFEAEKTARLALAHGRKQPRGGV FLVHGNHIRGPLGQQGELRYRTRIEDTTLLRMAEKIGISPSYVDRIRAVIDKTGKSTFDSGDLAACLGIGERSARRVLKK FVDSGYATLVGKENAHQVGRPKNLVKIAI
Sequences:
>Translated_429_residues MSETIALIGPSDSVTVMYDSVTRFFPDLTFKTYVRELTEESHQVLEQSQSECDGLLFAGIGVQEAAKARGVVTKPHAHIE RGAYSLLRAYSGIRSSGIPHARVSVDVITDTVLNEVIREYSLPFSKVYSMPFAVRFREEEYYERHRQLLDSGKAQAAMSG FGSVYRRLKEEGYPVFRMLPSSLQIRETTERLLSDIATRDLRSAGIAIQIVRLHRNDEQSVNEYEHMKDEGRFFLELLEY VRAIQGSLFNFGKREYVIFATRGVIESHVHLDMFTRLMDWARGNNMLISSGIGIGSTAFEAEKTARLALAHGRKQPRGGV FLVHGNHIRGPLGQQGELRYRTRIEDTTLLRMAEKIGISPSYVDRIRAVIDKTGKSTFDSGDLAACLGIGERSARRVLKK FVDSGYATLVGKENAHQVGRPKNLVKIAI >Mature_428_residues SETIALIGPSDSVTVMYDSVTRFFPDLTFKTYVRELTEESHQVLEQSQSECDGLLFAGIGVQEAAKARGVVTKPHAHIER GAYSLLRAYSGIRSSGIPHARVSVDVITDTVLNEVIREYSLPFSKVYSMPFAVRFREEEYYERHRQLLDSGKAQAAMSGF GSVYRRLKEEGYPVFRMLPSSLQIRETTERLLSDIATRDLRSAGIAIQIVRLHRNDEQSVNEYEHMKDEGRFFLELLEYV RAIQGSLFNFGKREYVIFATRGVIESHVHLDMFTRLMDWARGNNMLISSGIGIGSTAFEAEKTARLALAHGRKQPRGGVF LVHGNHIRGPLGQQGELRYRTRIEDTTLLRMAEKIGISPSYVDRIRAVIDKTGKSTFDSGDLAACLGIGERSARRVLKKF VDSGYATLVGKENAHQVGRPKNLVKIAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48212; Mature: 48081
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETIALIGPSDSVTVMYDSVTRFFPDLTFKTYVRELTEESHQVLEQSQSECDGLLFAGI CCCCEEEECCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC GVQEAAKARGVVTKPHAHIERGAYSLLRAYSGIRSSGIPHARVSVDVITDTVLNEVIREY CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH SLPFSKVYSMPFAVRFREEEYYERHRQLLDSGKAQAAMSGFGSVYRRLKEEGYPVFRMLP CCCHHHHHCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCC SSLQIRETTERLLSDIATRDLRSAGIAIQIVRLHRNDEQSVNEYEHMKDEGRFFLELLEY CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH VRAIQGSLFNFGKREYVIFATRGVIESHVHLDMFTRLMDWARGNNMLISSGIGIGSTAFE HHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHH AEKTARLALAHGRKQPRGGVFLVHGNHIRGPLGQQGELRYRTRIEDTTLLRMAEKIGISP HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCH SYVDRIRAVIDKTGKSTFDSGDLAACLGIGERSARRVLKKFVDSGYATLVGKENAHQVGR HHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCHHHCCC PKNLVKIAI CCCEEEEEC >Mature Secondary Structure SETIALIGPSDSVTVMYDSVTRFFPDLTFKTYVRELTEESHQVLEQSQSECDGLLFAGI CCCEEEECCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC GVQEAAKARGVVTKPHAHIERGAYSLLRAYSGIRSSGIPHARVSVDVITDTVLNEVIREY CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH SLPFSKVYSMPFAVRFREEEYYERHRQLLDSGKAQAAMSGFGSVYRRLKEEGYPVFRMLP CCCHHHHHCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCC SSLQIRETTERLLSDIATRDLRSAGIAIQIVRLHRNDEQSVNEYEHMKDEGRFFLELLEY CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH VRAIQGSLFNFGKREYVIFATRGVIESHVHLDMFTRLMDWARGNNMLISSGIGIGSTAFE HHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHH AEKTARLALAHGRKQPRGGVFLVHGNHIRGPLGQQGELRYRTRIEDTTLLRMAEKIGISP HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCH SYVDRIRAVIDKTGKSTFDSGDLAACLGIGERSARRVLKKFVDSGYATLVGKENAHQVGR HHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCHHHCCC PKNLVKIAI CCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA