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The map label for this gene is tsr [C]

Identifier: 78358060

GI number: 78358060

Start: 3005469

End: 3007562

Strand: Direct

Name: tsr [C]

Synonym: Dde_3020

Alternate gene names: 78358060

Gene position: 3005469-3007562 (Clockwise)

Preceding gene: 78358059

Following gene: 78358061

Centisome position: 80.57

GC content: 57.69

Gene sequence:

>2094_bases
ATGTTTGCTTCAATCAAAGCCAGAGTGGTACTGGGCCTGCTGTTTTCCATTGCCGTGGCCATCGGCGGCGTTTCCACCAT
TGTCTACTTCAACGTGAACTCCCTTTCGCAGCAAGCGTTCAGAGAGTCATCAGCCAGTCAGCTCAACCGCATCGACGACT
TCATGAGCACCTTTGTCAACGATGCCAAATACACGGCCGCGTTTCTGGCTTCGCGGCCCGAACTGCAGAATGCGCAGGGC
AAACTGACCGTTTTTGCCGGCAGAACCCAGTCGTCCAAAATCACGCGTGACATTCTGGCAACTGAAACCGAACGTGCAAT
TTTCGACCTGTTCGGCGGCATCATAACCGCCAACCCCAACTACGACTTCGCCTTCATGGGCTCAAGCGACTCCGGCTTTG
TGCAGTTTCCCGAAGATACCATGCCCGCGGGCTACGACCCCACCAAACGACCATGGTACCGTGAAATGCTCGCATCCGAT
GCAGACACCTCGCTGAGCAAGGCATATCTTTCCACAACGGGCAAACCCGTAGGTTCCATCACCGCCAAAATACGCACCAA
CGGACGTGTCAGCGGGGTTGTGGGCATAGACATCAACCTGTCCACCCTGACCAACGTCACCTCATCCATCACCACCGGCA
AGACAGGGTATGTCATGCTGATAGAAGACGGCGGAGTCATTCTGTCCGATCCGGCACAGCCTGCCCGGTCGTTTAAAAAC
ATTTCGGAACTGAACAATGCCGCGCTGGACACACTGGTCAAACTGGAAAACGGCACAGTGGACATAATGCTGGACGGAGT
GCGCAAACTGGCAACGGTGCACCACGCCGACAGTCTGGGCTGGAAGCTGGTACTTATTCAGGATGAAGCGGAAGTGTTTC
AGGCCACGCGGGACACGCTGACCAACGTGATACTGCTCAGTCTGGGGCTGGCCGTCCTGCTGCTGGCGGTGGCATGGCTG
CTGGGACGTTCCATCGCGCGTCCCATAGGTCTGCTGGCCGATTCCGCGCAGGTTGTGGCCCGCGGCGAATACGATAAAAT
GCCGGATGCCCGTCACTTCAGCGGCGAACTGGCAACACTGCACCAGAGCATGACCACCATGGTCACAGAACTGGCAAAAA
CCATCAAGGAAGCCCGCAGCAAAACCGTGGAAGCTGAAGAGCAGACTCTGAAAGCGGAAAAAGCCCTTGAAGAGGCAAGA
CATGCCCGCGAACAGGCCGATCAGGCCACGCGTCAGGGTATGCTTGCAGCGGCCGGACAGCTGGAATCCATCGTGCTGCA
GATTAACAATGCCTCTCAGGAGCTTTCGGGCCAGATAGCGCAGGCCAGCGACAACGCGGGGCTGCAGCGCGAACGCACGG
CAGAGGCAGCCACAGCCATGGAGCAGATCAACGCCACGGTGCTTGAAGTGGCCAGCAACGCATCGCGCGCTGCCGAAAGC
GCCGAAACAGCCAAACAGCAGGCCGACAACGGCGGACGCATAGTGCACGACGTTGTTTCCAGCATCAATCAGGTGGACGG
CGTCACCCGCGACCTGCAGACAACGCTGGACAGTCTGGGCAAACAGGCACAGGACATCGGACAGATAATGAACGTAATCA
CCGATATTGCCGACCAGACCAACCTGCTGGCACTGAACGCTGCCATTGAAGCGGCGCGGGCCGGTGACGCCGGACGCGGC
TTTGCCGTTGTGGCCGACGAAGTGCGTAAACTGGCAGAAAAAACCATGCATGCCACCAAAGAAGTGGGCAGCGCCGTCAC
TGCCATCCAGCAGGCCACCAAAGTCAACATCGAGGGCATGGGCAATGTGACCCAGCTGGTGGGCAGGTGTACCGATCAGG
CGTCCGAAGCCGGCAAGTCGCTGGCCAGCATTGTAGATATAGTGGACCACACGGCGGATCAGGTGCGTAATATCGCCACT
GCCAGCGAAGAACAGTCCGCGGCTTCGGAAGAAATCACGCGCAGCACTGAAGAGGTTAACCGCATTGCCGGTGATGTTGC
CGAAATCATGAACGATTCCAACACGGCAGTGAATGATCTGGCCCGGCTGGCAGACGAACTGCAGGGCCTGATCGAAAAGC
TGAAATCCGCATAA

Upstream 100 bases:

>100_bases
GAATAACCTCAGGCCTCTTCCACCGCTTCGCCGCTTGTATTATGGTAGCGTTTAATAGCACTGCTACACACTGTGCCATC
AATACAACAAAGGGGGAGCC

Downstream 100 bases:

>100_bases
CCGCCGTACAGACTCTGCACGCAAAAAAAACGGACGGACCGGCATGCCGGTCCGTCTTTTTTTCTACAGTTGCCACAGCA
GCGCAACATACTGCTTTAAT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MFASIKARVVLGLLFSIAVAIGGVSTIVYFNVNSLSQQAFRESSASQLNRIDDFMSTFVNDAKYTAAFLASRPELQNAQG
KLTVFAGRTQSSKITRDILATETERAIFDLFGGIITANPNYDFAFMGSSDSGFVQFPEDTMPAGYDPTKRPWYREMLASD
ADTSLSKAYLSTTGKPVGSITAKIRTNGRVSGVVGIDINLSTLTNVTSSITTGKTGYVMLIEDGGVILSDPAQPARSFKN
ISELNNAALDTLVKLENGTVDIMLDGVRKLATVHHADSLGWKLVLIQDEAEVFQATRDTLTNVILLSLGLAVLLLAVAWL
LGRSIARPIGLLADSAQVVARGEYDKMPDARHFSGELATLHQSMTTMVTELAKTIKEARSKTVEAEEQTLKAEKALEEAR
HAREQADQATRQGMLAAAGQLESIVLQINNASQELSGQIAQASDNAGLQRERTAEAATAMEQINATVLEVASNASRAAES
AETAKQQADNGGRIVHDVVSSINQVDGVTRDLQTTLDSLGKQAQDIGQIMNVITDIADQTNLLALNAAIEAARAGDAGRG
FAVVADEVRKLAEKTMHATKEVGSAVTAIQQATKVNIEGMGNVTQLVGRCTDQASEAGKSLASIVDIVDHTADQVRNIAT
ASEEQSAASEEITRSTEEVNRIAGDVAEIMNDSNTAVNDLARLADELQGLIEKLKSA

Sequences:

>Translated_697_residues
MFASIKARVVLGLLFSIAVAIGGVSTIVYFNVNSLSQQAFRESSASQLNRIDDFMSTFVNDAKYTAAFLASRPELQNAQG
KLTVFAGRTQSSKITRDILATETERAIFDLFGGIITANPNYDFAFMGSSDSGFVQFPEDTMPAGYDPTKRPWYREMLASD
ADTSLSKAYLSTTGKPVGSITAKIRTNGRVSGVVGIDINLSTLTNVTSSITTGKTGYVMLIEDGGVILSDPAQPARSFKN
ISELNNAALDTLVKLENGTVDIMLDGVRKLATVHHADSLGWKLVLIQDEAEVFQATRDTLTNVILLSLGLAVLLLAVAWL
LGRSIARPIGLLADSAQVVARGEYDKMPDARHFSGELATLHQSMTTMVTELAKTIKEARSKTVEAEEQTLKAEKALEEAR
HAREQADQATRQGMLAAAGQLESIVLQINNASQELSGQIAQASDNAGLQRERTAEAATAMEQINATVLEVASNASRAAES
AETAKQQADNGGRIVHDVVSSINQVDGVTRDLQTTLDSLGKQAQDIGQIMNVITDIADQTNLLALNAAIEAARAGDAGRG
FAVVADEVRKLAEKTMHATKEVGSAVTAIQQATKVNIEGMGNVTQLVGRCTDQASEAGKSLASIVDIVDHTADQVRNIAT
ASEEQSAASEEITRSTEEVNRIAGDVAEIMNDSNTAVNDLARLADELQGLIEKLKSA
>Mature_697_residues
MFASIKARVVLGLLFSIAVAIGGVSTIVYFNVNSLSQQAFRESSASQLNRIDDFMSTFVNDAKYTAAFLASRPELQNAQG
KLTVFAGRTQSSKITRDILATETERAIFDLFGGIITANPNYDFAFMGSSDSGFVQFPEDTMPAGYDPTKRPWYREMLASD
ADTSLSKAYLSTTGKPVGSITAKIRTNGRVSGVVGIDINLSTLTNVTSSITTGKTGYVMLIEDGGVILSDPAQPARSFKN
ISELNNAALDTLVKLENGTVDIMLDGVRKLATVHHADSLGWKLVLIQDEAEVFQATRDTLTNVILLSLGLAVLLLAVAWL
LGRSIARPIGLLADSAQVVARGEYDKMPDARHFSGELATLHQSMTTMVTELAKTIKEARSKTVEAEEQTLKAEKALEEAR
HAREQADQATRQGMLAAAGQLESIVLQINNASQELSGQIAQASDNAGLQRERTAEAATAMEQINATVLEVASNASRAAES
AETAKQQADNGGRIVHDVVSSINQVDGVTRDLQTTLDSLGKQAQDIGQIMNVITDIADQTNLLALNAAIEAARAGDAGRG
FAVVADEVRKLAEKTMHATKEVGSAVTAIQQATKVNIEGMGNVTQLVGRCTDQASEAGKSLASIVDIVDHTADQVRNIAT
ASEEQSAASEEITRSTEEVNRIAGDVAEIMNDSNTAVNDLARLADELQGLIEKLKSA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=368, Percent_Identity=30.4347826086957, Blast_Score=121, Evalue=2e-28,
Organism=Escherichia coli, GI1787690, Length=234, Percent_Identity=35.042735042735, Blast_Score=116, Evalue=6e-27,
Organism=Escherichia coli, GI1788195, Length=208, Percent_Identity=38.9423076923077, Blast_Score=113, Evalue=5e-26,
Organism=Escherichia coli, GI1788194, Length=238, Percent_Identity=35.7142857142857, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI1789453, Length=297, Percent_Identity=30.6397306397306, Blast_Score=96, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 74309; Mature: 74309

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFASIKARVVLGLLFSIAVAIGGVSTIVYFNVNSLSQQAFRESSASQLNRIDDFMSTFVN
CCCCHHHHHHHHHHHHHHHHHCCHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DAKYTAAFLASRPELQNAQGKLTVFAGRTQSSKITRDILATETERAIFDLFGGIITANPN
CHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCC
YDFAFMGSSDSGFVQFPEDTMPAGYDPTKRPWYREMLASDADTSLSKAYLSTTGKPVGSI
CCEEEECCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCE
TAKIRTNGRVSGVVGIDINLSTLTNVTSSITTGKTGYVMLIEDGGVILSDPAQPARSFKN
EEEEECCCEEEEEEEEEEEHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCHHHHHHHH
ISELNNAALDTLVKLENGTVDIMLDGVRKLATVHHADSLGWKLVLIQDEAEVFQATRDTL
HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHH
TNVILLSLGLAVLLLAVAWLLGRSIARPIGLLADSAQVVARGEYDKMPDARHFSGELATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHH
HQSMTTMVTELAKTIKEARSKTVEAEEQTLKAEKALEEARHAREQADQATRQGMLAAAGQ
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LESIVLQINNASQELSGQIAQASDNAGLQRERTAEAATAMEQINATVLEVASNASRAAES
HHHHHEEECCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AETAKQQADNGGRIVHDVVSSINQVDGVTRDLQTTLDSLGKQAQDIGQIMNVITDIADQT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMHATKEVGSAVTAIQQATKVNIEGM
CEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNVTQLVGRCTDQASEAGKSLASIVDIVDHTADQVRNIATASEEQSAASEEITRSTEEVN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RIAGDVAEIMNDSNTAVNDLARLADELQGLIEKLKSA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFASIKARVVLGLLFSIAVAIGGVSTIVYFNVNSLSQQAFRESSASQLNRIDDFMSTFVN
CCCCHHHHHHHHHHHHHHHHHCCHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DAKYTAAFLASRPELQNAQGKLTVFAGRTQSSKITRDILATETERAIFDLFGGIITANPN
CHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCC
YDFAFMGSSDSGFVQFPEDTMPAGYDPTKRPWYREMLASDADTSLSKAYLSTTGKPVGSI
CCEEEECCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCE
TAKIRTNGRVSGVVGIDINLSTLTNVTSSITTGKTGYVMLIEDGGVILSDPAQPARSFKN
EEEEECCCEEEEEEEEEEEHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCHHHHHHHH
ISELNNAALDTLVKLENGTVDIMLDGVRKLATVHHADSLGWKLVLIQDEAEVFQATRDTL
HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHH
TNVILLSLGLAVLLLAVAWLLGRSIARPIGLLADSAQVVARGEYDKMPDARHFSGELATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHH
HQSMTTMVTELAKTIKEARSKTVEAEEQTLKAEKALEEARHAREQADQATRQGMLAAAGQ
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LESIVLQINNASQELSGQIAQASDNAGLQRERTAEAATAMEQINATVLEVASNASRAAES
HHHHHEEECCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AETAKQQADNGGRIVHDVVSSINQVDGVTRDLQTTLDSLGKQAQDIGQIMNVITDIADQT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMHATKEVGSAVTAIQQATKVNIEGM
CEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNVTQLVGRCTDQASEAGKSLASIVDIVDHTADQVRNIATASEEQSAASEEITRSTEEVN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RIAGDVAEIMNDSNTAVNDLARLADELQGLIEKLKSA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA