| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357953
Identifier: 78357953
GI number: 78357953
Start: 2894940
End: 2895488
Strand: Reverse
Name: 78357953
Synonym: Dde_2913
Alternate gene names: NA
Gene position: 2895488-2894940 (Counterclockwise)
Preceding gene: 78357956
Following gene: 78357952
Centisome position: 77.62
GC content: 45.72
Gene sequence:
>549_bases TTGGGCAATTGTGAATGCTACATATGCAGCCAAAAATACAAAGAGTGTTGCGAGATCAATATTGCAATAAAAAATGAGGA ACCATTCATGTCTATTAAAAGAATTGAAACAAAACTGGTATCGCAGGCACAGAATGAGTGGATTTGCAGTGCCACTATGG AAACAGAAACTGGATATCGCGTTACAAAGCTCGGACAAGGGGATAGCCTACAACAGGCCGAAGATCGTGCGGTTCGCCAT GCGACAGATGCCATTGCTTTTCTCGAAAATGCCTGTGAGTACAACGAGACTTCACTGCAAAGTCAGCATAGGACAAGCAG GTCATCCAGCGGGGCATCGTATCAACAGTATCAGGCCCAAACGGAAGATAAGTCTCGCTTCAATGGTGGCGGTTCAAAAC AAGCCTCTGAGAAGCAGCTTAATCTGATTGAACAGCTTGCCCAAAAGAAGCGATGTGATGCGGAATACGCTTGCCGGGGA GAATTCGGTATCGGATTGAACCAGATCACTGGCGCACAGGCGAATCAACTTATTAAGTCGTTGAAGTAG
Upstream 100 bases:
>100_bases CTTGCAAAGCAGACTCCAGATTCAATTCCAGATTGCACACTATTATATGAGACACCCCATAGCAGCCTGAAACACCCCGT TGTGACAGGAAGGAATGCCT
Downstream 100 bases:
>100_bases TGGGCAGAATGGCACGAGATGCTTTCGTTTTGAAATCAACAGGTTAAGGGCAACCTAAGTCATCCCACAGTAGCCCATTA TGTAAGGAAGGACTCATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MGNCECYICSQKYKECCEINIAIKNEEPFMSIKRIETKLVSQAQNEWICSATMETETGYRVTKLGQGDSLQQAEDRAVRH ATDAIAFLENACEYNETSLQSQHRTSRSSSGASYQQYQAQTEDKSRFNGGGSKQASEKQLNLIEQLAQKKRCDAEYACRG EFGIGLNQITGAQANQLIKSLK
Sequences:
>Translated_182_residues MGNCECYICSQKYKECCEINIAIKNEEPFMSIKRIETKLVSQAQNEWICSATMETETGYRVTKLGQGDSLQQAEDRAVRH ATDAIAFLENACEYNETSLQSQHRTSRSSSGASYQQYQAQTEDKSRFNGGGSKQASEKQLNLIEQLAQKKRCDAEYACRG EFGIGLNQITGAQANQLIKSLK >Mature_181_residues GNCECYICSQKYKECCEINIAIKNEEPFMSIKRIETKLVSQAQNEWICSATMETETGYRVTKLGQGDSLQQAEDRAVRHA TDAIAFLENACEYNETSLQSQHRTSRSSSGASYQQYQAQTEDKSRFNGGGSKQASEKQLNLIEQLAQKKRCDAEYACRGE FGIGLNQITGAQANQLIKSLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20373; Mature: 20242
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNCECYICSQKYKECCEINIAIKNEEPFMSIKRIETKLVSQAQNEWICSATMETETGYR CCCCEEEEECHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCE VTKLGQGDSLQQAEDRAVRHATDAIAFLENACEYNETSLQSQHRTSRSSSGASYQQYQAQ EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHH TEDKSRFNGGGSKQASEKQLNLIEQLAQKKRCDAEYACRGEFGIGLNQITGAQANQLIKS HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHCCHHHHHHHHH LK CC >Mature Secondary Structure GNCECYICSQKYKECCEINIAIKNEEPFMSIKRIETKLVSQAQNEWICSATMETETGYR CCCEEEEECHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCE VTKLGQGDSLQQAEDRAVRHATDAIAFLENACEYNETSLQSQHRTSRSSSGASYQQYQAQ EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHH TEDKSRFNGGGSKQASEKQLNLIEQLAQKKRCDAEYACRGEFGIGLNQITGAQANQLIKS HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHCCHHHHHHHHH LK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA