| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357916
Identifier: 78357916
GI number: 78357916
Start: 2864391
End: 2865455
Strand: Reverse
Name: 78357916
Synonym: Dde_2875
Alternate gene names: NA
Gene position: 2865455-2864391 (Counterclockwise)
Preceding gene: 78357917
Following gene: 78357914
Centisome position: 76.82
GC content: 42.82
Gene sequence:
>1065_bases TTGGGGGATAAATATTGTAAAAAAAGAAGTGATCAAAAGATGATGAGTTTTTCAGATAAGCAAGTCTGCTGCTTATTGGC AACAGAGCACGTGCCTTGGCCTTGGCTGCGGCAGACGTCTGGGGGAAAGGGAGTGGTTGGCTCTGTGCGTTTTAAAATTA ATGAGGACCAGCAAGGAGACGCAGATTGGCTTGTTGTGGTAGATAGTCCACCTGAAAATTTATATACAAGGGTACCCTTC GATCGCCGCATACTGTTTATAACAGAGCCTCCAGAAGTAAAAGTATACTCACCATCTTTTTTGAAGCAGTTTTATTGGAT TATTTCACCATATCTTGTGAACGGTGCAACCGGGCGTTGCTTACTTGAGAATTCTTGTTTGCCGTGGCAATTTGGTGTTG ATATGGATTCTCGGTGCTGTAATGAGCCTTTTGGGGATTTAGATAACCTTGTTAATTACGAGGTCCCCGTTAAAAGGCAC GAAATATCGGTTGTTTGTTCAACGAAGGCGATTACAAATGCCCAGAAGCAGCGCTTAGCTTTTGTTAAGACGTTGTCAAA ACGGCTTGGAGATCGACTGCATATCTACGGCAGGGGAGTGTCTCCGGTTCGAGACAAGGCAACGGCCATAATCCCGTATC GCTATCATATTGTGTTAGAAAATAATAGGTTGGATAATTTTTGGACTGAAAAGTTTTCTGATGCACTTCTTGGATGGAGC CTGCCACTCTATGCAGGAGCTGGAAATCTGGAAAAGGCTCTTCCTGCAAATGGGATTATTCAGCTTCCTATTGATAATCA CGAGGAAGCAATTGCGGTTGTTGAAAGAGTATTACGAGATGATCCATACATGGAGTATCAACCTGCTCTTGCAAAATGCA GGGAATGGTGCCTGAAGAATACAAATATTTTTTTTAGGGTGGCAACATTGATTGAAAACTCGATGGTTGTTAACAGTTCG CGATTACTTGATAAGCATTGCAAGATACTTAAAACGACCCGCGTAGAGAGTGCCATTTATCGTAGATTGAGACGGTGGGG ATTGTTTTCAGCAGAGTCTAACTAG
Upstream 100 bases:
>100_bases CAGCATATAAGTGTATTCAGGCGAAGAATTGGATTCATAGCCTTTGCTTTTTCGTATCGGCATTACGCTTTCCTTTTGAG TTGCTGGCAGTAAGTTTCTC
Downstream 100 bases:
>100_bases CAATATTAATTGGATATACATAGCAATCTAAACACCCCATGACTCCTTCCTTGGTGAGCATTGTGCTTCCGGACGGAATA CACCAGTTCTTTCAAGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Methyltransferase FkbM Family; Glycosyl Transferase Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MGDKYCKKRSDQKMMSFSDKQVCCLLATEHVPWPWLRQTSGGKGVVGSVRFKINEDQQGDADWLVVVDSPPENLYTRVPF DRRILFITEPPEVKVYSPSFLKQFYWIISPYLVNGATGRCLLENSCLPWQFGVDMDSRCCNEPFGDLDNLVNYEVPVKRH EISVVCSTKAITNAQKQRLAFVKTLSKRLGDRLHIYGRGVSPVRDKATAIIPYRYHIVLENNRLDNFWTEKFSDALLGWS LPLYAGAGNLEKALPANGIIQLPIDNHEEAIAVVERVLRDDPYMEYQPALAKCREWCLKNTNIFFRVATLIENSMVVNSS RLLDKHCKILKTTRVESAIYRRLRRWGLFSAESN
Sequences:
>Translated_354_residues MGDKYCKKRSDQKMMSFSDKQVCCLLATEHVPWPWLRQTSGGKGVVGSVRFKINEDQQGDADWLVVVDSPPENLYTRVPF DRRILFITEPPEVKVYSPSFLKQFYWIISPYLVNGATGRCLLENSCLPWQFGVDMDSRCCNEPFGDLDNLVNYEVPVKRH EISVVCSTKAITNAQKQRLAFVKTLSKRLGDRLHIYGRGVSPVRDKATAIIPYRYHIVLENNRLDNFWTEKFSDALLGWS LPLYAGAGNLEKALPANGIIQLPIDNHEEAIAVVERVLRDDPYMEYQPALAKCREWCLKNTNIFFRVATLIENSMVVNSS RLLDKHCKILKTTRVESAIYRRLRRWGLFSAESN >Mature_353_residues GDKYCKKRSDQKMMSFSDKQVCCLLATEHVPWPWLRQTSGGKGVVGSVRFKINEDQQGDADWLVVVDSPPENLYTRVPFD RRILFITEPPEVKVYSPSFLKQFYWIISPYLVNGATGRCLLENSCLPWQFGVDMDSRCCNEPFGDLDNLVNYEVPVKRHE ISVVCSTKAITNAQKQRLAFVKTLSKRLGDRLHIYGRGVSPVRDKATAIIPYRYHIVLENNRLDNFWTEKFSDALLGWSL PLYAGAGNLEKALPANGIIQLPIDNHEEAIAVVERVLRDDPYMEYQPALAKCREWCLKNTNIFFRVATLIENSMVVNSSR LLDKHCKILKTTRVESAIYRRLRRWGLFSAESN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40660; Mature: 40529
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDKYCKKRSDQKMMSFSDKQVCCLLATEHVPWPWLRQTSGGKGVVGSVRFKINEDQQGD CCCHHHHHCCCHHHHCCCCCCEEEEEEECCCCCCHHCCCCCCCCEEEEEEEEECCCCCCC ADWLVVVDSPPENLYTRVPFDRRILFITEPPEVKVYSPSFLKQFYWIISPYLVNGATGRC CCEEEEECCCCCCCEEECCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHEECCCCCEE LLENSCLPWQFGVDMDSRCCNEPFGDLDNLVNYEVPVKRHEISVVCSTKAITNAQKQRLA EEECCCCCEEECCCCCHHHCCCCCCCHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHHH FVKTLSKRLGDRLHIYGRGVSPVRDKATAIIPYRYHIVLENNRLDNFWTEKFSDALLGWS HHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCC LPLYAGAGNLEKALPANGIIQLPIDNHEEAIAVVERVLRDDPYMEYQPALAKCREWCLKN CCEEECCCCCHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC TNIFFRVATLIENSMVVNSSRLLDKHCKILKTTRVESAIYRRLRRWGLFSAESN CCEEEEEEHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GDKYCKKRSDQKMMSFSDKQVCCLLATEHVPWPWLRQTSGGKGVVGSVRFKINEDQQGD CCHHHHHCCCHHHHCCCCCCEEEEEEECCCCCCHHCCCCCCCCEEEEEEEEECCCCCCC ADWLVVVDSPPENLYTRVPFDRRILFITEPPEVKVYSPSFLKQFYWIISPYLVNGATGRC CCEEEEECCCCCCCEEECCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHEECCCCCEE LLENSCLPWQFGVDMDSRCCNEPFGDLDNLVNYEVPVKRHEISVVCSTKAITNAQKQRLA EEECCCCCEEECCCCCHHHCCCCCCCHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHHH FVKTLSKRLGDRLHIYGRGVSPVRDKATAIIPYRYHIVLENNRLDNFWTEKFSDALLGWS HHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCC LPLYAGAGNLEKALPANGIIQLPIDNHEEAIAVVERVLRDDPYMEYQPALAKCREWCLKN CCEEECCCCCHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC TNIFFRVATLIENSMVVNSSRLLDKHCKILKTTRVESAIYRRLRRWGLFSAESN CCEEEEEEHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA