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The map label for this gene is insF1 [C]

Identifier: 78357913

GI number: 78357913

Start: 2862603

End: 2863442

Strand: Reverse

Name: insF1 [C]

Synonym: Dde_2872

Alternate gene names: 78357913

Gene position: 2863442-2862603 (Counterclockwise)

Preceding gene: 78357914

Following gene: 78357904

Centisome position: 76.76

GC content: 49.52

Gene sequence:

>840_bases
ATGTGCCATATGCTCGGGGTTTCCCAGAGCGGCTTTTACTCGTGGGCGACTCGTCCCCCGTCTCAAAGGGCAAGGCATAA
TGCTCAATTGCGCGTCCGTATCAGAGAATTGTTCGAGGAACACAAAAGAACAGCTGGAAGTCCGATGATTACAGAAGACT
TACGGGCTGAAGACGCTTTTCGGCATGTTAGTAGATCTCGGGTGGCTAGGCACATGCGGGAAATGGGGTTGCGCTGCCAG
ACCATGAAGAAGTTTGTTGTCACGACCGACTCCTCTCACTCTGAGCCTGTTGCCCCGAATGTCCTGAATCGGCGGTTTTC
TGCCTCAGCTCCAAACGTCACGTGGGTCAGCGACATTACTTACATAAAAATAGGCAGAACGTGGCATTACCTGACGGTAT
TCATCGACCTGTATTCCCGCTTAGTTGTGGGGTGGGATCTCAGTGCATCGCTGGAGCGGCATTCTGTTATTCACGCGTTT
CGGAAAGCAGTGGCCCGTCGAAGGCCTTCAAAAGGGTTGCTTGTCCATAGCGATCGTGGAATCCAATATGCCAGTAGGGA
TTTCAGAAAGGAATTACACCGACATGGCTGTATTCAAAGCATGAGTCGAAAAGGCAACTGTTGGGACAATGCCGTTGCTG
AATCATTCTTCCATACCCTGAAAACCCAGTTGATCTATCAAAGGAAATTTACAGACAGGCGTGAAGCAGAGCTTGCTCTC
TTCCATTACATAGAGGCGTATTACAATCGTCGTCGGAGGCATTCCAGTAACGGTTGGATGTCTCCTGCGGCTTTCGAAAA
TTTCAACCAGGAATACAAAAAAGGGCCATTTGCATTCTAG

Upstream 100 bases:

>100_bases
GGGATATTTTAAAAAAAGCCTTGGCCATCTTCAGCAGCAGCGCACCGAAATAAAATTTCAAATTATCAAAAATTGCCGCT
CGTTATTTCCGGTGAAGAAG

Downstream 100 bases:

>100_bases
GGTTGGAATCCACCCATTTTGACCCTGGATTCTTGGTCAGGTCAAATGCAACCTCTGGTTGGATTGCTCTGTTTTTCATT
GCCTCACCAGAATCTAACAT

Product: transposase-like

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MCHMLGVSQSGFYSWATRPPSQRARHNAQLRVRIRELFEEHKRTAGSPMITEDLRAEDAFRHVSRSRVARHMREMGLRCQ
TMKKFVVTTDSSHSEPVAPNVLNRRFSASAPNVTWVSDITYIKIGRTWHYLTVFIDLYSRLVVGWDLSASLERHSVIHAF
RKAVARRRPSKGLLVHSDRGIQYASRDFRKELHRHGCIQSMSRKGNCWDNAVAESFFHTLKTQLIYQRKFTDRREAELAL
FHYIEAYYNRRRRHSSNGWMSPAAFENFNQEYKKGPFAF

Sequences:

>Translated_279_residues
MCHMLGVSQSGFYSWATRPPSQRARHNAQLRVRIRELFEEHKRTAGSPMITEDLRAEDAFRHVSRSRVARHMREMGLRCQ
TMKKFVVTTDSSHSEPVAPNVLNRRFSASAPNVTWVSDITYIKIGRTWHYLTVFIDLYSRLVVGWDLSASLERHSVIHAF
RKAVARRRPSKGLLVHSDRGIQYASRDFRKELHRHGCIQSMSRKGNCWDNAVAESFFHTLKTQLIYQRKFTDRREAELAL
FHYIEAYYNRRRRHSSNGWMSPAAFENFNQEYKKGPFAF
>Mature_279_residues
MCHMLGVSQSGFYSWATRPPSQRARHNAQLRVRIRELFEEHKRTAGSPMITEDLRAEDAFRHVSRSRVARHMREMGLRCQ
TMKKFVVTTDSSHSEPVAPNVLNRRFSASAPNVTWVSDITYIKIGRTWHYLTVFIDLYSRLVVGWDLSASLERHSVIHAF
RKAVARRRPSKGLLVHSDRGIQYASRDFRKELHRHGCIQSMSRKGNCWDNAVAESFFHTLKTQLIYQRKFTDRREAELAL
FHYIEAYYNRRRRHSSNGWMSPAAFENFNQEYKKGPFAF

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=230, Percent_Identity=30, Blast_Score=108, Evalue=5e-24,
Organism=Escherichia coli, GI1788405, Length=271, Percent_Identity=40.2214022140221, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1787263, Length=271, Percent_Identity=40.2214022140221, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1786753, Length=271, Percent_Identity=40.2214022140221, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1786570, Length=271, Percent_Identity=40.2214022140221, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1786490, Length=271, Percent_Identity=40.2214022140221, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1789981, Length=240, Percent_Identity=34.1666666666667, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32767; Mature: 32767

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCHMLGVSQSGFYSWATRPPSQRARHNAQLRVRIRELFEEHKRTAGSPMITEDLRAEDAF
CCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RHVSRSRVARHMREMGLRCQTMKKFVVTTDSSHSEPVAPNVLNRRFSASAPNVTWVSDIT
HHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCHHHHHCCCCCCCCEEEECCEE
YIKIGRTWHYLTVFIDLYSRLVVGWDLSASLERHSVIHAFRKAVARRRPSKGLLVHSDRG
EEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
IQYASRDFRKELHRHGCIQSMSRKGNCWDNAVAESFFHTLKTQLIYQRKFTDRREAELAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FHYIEAYYNRRRRHSSNGWMSPAAFENFNQEYKKGPFAF
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MCHMLGVSQSGFYSWATRPPSQRARHNAQLRVRIRELFEEHKRTAGSPMITEDLRAEDAF
CCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RHVSRSRVARHMREMGLRCQTMKKFVVTTDSSHSEPVAPNVLNRRFSASAPNVTWVSDIT
HHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCHHHHHCCCCCCCCEEEECCEE
YIKIGRTWHYLTVFIDLYSRLVVGWDLSASLERHSVIHAFRKAVARRRPSKGLLVHSDRG
EEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
IQYASRDFRKELHRHGCIQSMSRKGNCWDNAVAESFFHTLKTQLIYQRKFTDRREAELAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FHYIEAYYNRRRRHSSNGWMSPAAFENFNQEYKKGPFAF
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]