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The map label for this gene is tnpA [H]

Identifier: 78357912

GI number: 78357912

Start: 2861203

End: 2862471

Strand: Direct

Name: tnpA [H]

Synonym: Dde_2871

Alternate gene names: 78357912

Gene position: 2861203-2862471 (Clockwise)

Preceding gene: 78357911

Following gene: 78357915

Centisome position: 76.7

GC content: 53.27

Gene sequence:

>1269_bases
ATGCTTGACCTGCTGAATCTGCCTGGCATAAAACCGGTGGATATGCGCCATGAGAGCAAGGGCCTTGTGATAGTTGCCGA
GCCGGAAACGGTCGAGGTACCGCTATGCGGGGGCTGCAACACCCTCATGCACAAACACGGCACGCGCAAAAACAAGTTCA
TGGACACGCCGTTGTACATGGAGCCCGTCCGTCTTGAAGTTCAGCGCCCGCGCTTTCGCTGTGAGTCGTGCGGCAAAATG
TCTATGCCGGAGTTGAGTTTTCTGGATGACAAACGGAGAGCCACCAAGCGGCTGGTCGATGTCATTCGGCAACAGTGCCT
GGGAACCACCTTCCATGCTTTAGCCGAGCAAACTGGCGTGGCGGTGAATACTGTCAAGAATATTGCCCACGACCTGATAA
ACGAACTATCGCAAACCGTTCGCTACGAAACCCCCGTTATTATGGGTATCGACGAAGTGAACCTCGCCGGTGGGTATCGC
TGTGTAATCACCAACCTGGCAACCAACAACGTCTTCGATATGTTAGAGCACCGGACCCAGGAGCATCTGAAGCCATTCTT
CAAGGCGCTGCCGGACGCTGACAAGGTGGAATGGGTCTGTACCGATATGTGGCGGCCCTTCAAGCGTTCTTTTGCTCAAT
ACCTGCCCAACGCCAAACTGGTGATCGACAAGTTCCATGTCGTTAAAATGGCCTCCGAAGCGCTGGAAGTTGAGCGCAAG
AACTATCAGGCTCAGTTAAGCAAAGAAGACCGGATTTACGTCAAAAAATCCATTCGCTGGCTCACCCTGAAGCGGCCCGG
TAACCTGACGCCCGCAGAACAAAAGGCGCTGGAAGTCGTGAAGCAGGCGATCCCTGAGCTTGCCGTAGCCTATGATTTCA
AGGAAGCCTTCTTCTGCATCTACGATGAACTCGACAAGCAGAATGCTCAGAATGCCTTTGAAGCCTGGGAGAATAGCTTG
CCAGACCAAGGGCTAGTGGCATTCAAGAAGCTGGCTAAAACGGTTCACAACCATTACGACGACATCTTTGCCTACTGGGA
TGCGCCGTTCTCAATCACCAATGGCTATACCGAAGGGCTCAACGGTCTGATCAAGATGTCCAACCGGTTAGGTCGGGGTT
ATGGCTACCCCATCATTCGGGCAAAGACGCTGTACTCCAAAGAAGCCCGAAAGGTCGGTAGTGGTATTCGAGCAGGTCAC
GGCAAGGTGGAATATGGGCCGCACATTCCGACGTTGTTGAAACAGGCAGAGAGTGGTGAGCTGGATTAG

Upstream 100 bases:

>100_bases
GTGCTCAAGTCTGATCGTCAGGGCATGGCCGCACTGGTTGACGTAGTGTATGACCTGCTGCGCGAAGGCCAAAACATCGA
CCTGGATATGGATTAAGCCG

Downstream 100 bases:

>100_bases
CGCGAGAGAGTTGCATCAAAGAATCCAACCAATGTTAGATTCTGGTGAGGCAATGAAAAACAGAGCAATCCAACCAGAGG
TTGCATTTGACCTGACCAAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MLDLLNLPGIKPVDMRHESKGLVIVAEPETVEVPLCGGCNTLMHKHGTRKNKFMDTPLYMEPVRLEVQRPRFRCESCGKM
SMPELSFLDDKRRATKRLVDVIRQQCLGTTFHALAEQTGVAVNTVKNIAHDLINELSQTVRYETPVIMGIDEVNLAGGYR
CVITNLATNNVFDMLEHRTQEHLKPFFKALPDADKVEWVCTDMWRPFKRSFAQYLPNAKLVIDKFHVVKMASEALEVERK
NYQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPELAVAYDFKEAFFCIYDELDKQNAQNAFEAWENSL
PDQGLVAFKKLAKTVHNHYDDIFAYWDAPFSITNGYTEGLNGLIKMSNRLGRGYGYPIIRAKTLYSKEARKVGSGIRAGH
GKVEYGPHIPTLLKQAESGELD

Sequences:

>Translated_422_residues
MLDLLNLPGIKPVDMRHESKGLVIVAEPETVEVPLCGGCNTLMHKHGTRKNKFMDTPLYMEPVRLEVQRPRFRCESCGKM
SMPELSFLDDKRRATKRLVDVIRQQCLGTTFHALAEQTGVAVNTVKNIAHDLINELSQTVRYETPVIMGIDEVNLAGGYR
CVITNLATNNVFDMLEHRTQEHLKPFFKALPDADKVEWVCTDMWRPFKRSFAQYLPNAKLVIDKFHVVKMASEALEVERK
NYQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPELAVAYDFKEAFFCIYDELDKQNAQNAFEAWENSL
PDQGLVAFKKLAKTVHNHYDDIFAYWDAPFSITNGYTEGLNGLIKMSNRLGRGYGYPIIRAKTLYSKEARKVGSGIRAGH
GKVEYGPHIPTLLKQAESGELD
>Mature_422_residues
MLDLLNLPGIKPVDMRHESKGLVIVAEPETVEVPLCGGCNTLMHKHGTRKNKFMDTPLYMEPVRLEVQRPRFRCESCGKM
SMPELSFLDDKRRATKRLVDVIRQQCLGTTFHALAEQTGVAVNTVKNIAHDLINELSQTVRYETPVIMGIDEVNLAGGYR
CVITNLATNNVFDMLEHRTQEHLKPFFKALPDADKVEWVCTDMWRPFKRSFAQYLPNAKLVIDKFHVVKMASEALEVERK
NYQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPELAVAYDFKEAFFCIYDELDKQNAQNAFEAWENSL
PDQGLVAFKKLAKTVHNHYDDIFAYWDAPFSITNGYTEGLNGLIKMSNRLGRGYGYPIIRAKTLYSKEARKVGSGIRAGH
GKVEYGPHIPTLLKQAESGELD

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 48036; Mature: 48036

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLLNLPGIKPVDMRHESKGLVIVAEPETVEVPLCGGCNTLMHKHGTRKNKFMDTPLYM
CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCEE
EPVRLEVQRPRFRCESCGKMSMPELSFLDDKRRATKRLVDVIRQQCLGTTFHALAEQTGV
CCHHEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
AVNTVKNIAHDLINELSQTVRYETPVIMGIDEVNLAGGYRCVITNLATNNVFDMLEHRTQ
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHH
EHLKPFFKALPDADKVEWVCTDMWRPFKRSFAQYLPNAKLVIDKFHVVKMASEALEVERK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
NYQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPELAVAYDFKEAFFCI
HHHHHCCCCCCEEEEECEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDELDKQNAQNAFEAWENSLPDQGLVAFKKLAKTVHNHYDDIFAYWDAPFSITNGYTEGL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH
NGLIKMSNRLGRGYGYPIIRAKTLYSKEARKVGSGIRAGHGKVEYGPHIPTLLKQAESGE
HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCC
LD
CC
>Mature Secondary Structure
MLDLLNLPGIKPVDMRHESKGLVIVAEPETVEVPLCGGCNTLMHKHGTRKNKFMDTPLYM
CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCEE
EPVRLEVQRPRFRCESCGKMSMPELSFLDDKRRATKRLVDVIRQQCLGTTFHALAEQTGV
CCHHEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
AVNTVKNIAHDLINELSQTVRYETPVIMGIDEVNLAGGYRCVITNLATNNVFDMLEHRTQ
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHH
EHLKPFFKALPDADKVEWVCTDMWRPFKRSFAQYLPNAKLVIDKFHVVKMASEALEVERK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
NYQAQLSKEDRIYVKKSIRWLTLKRPGNLTPAEQKALEVVKQAIPELAVAYDFKEAFFCI
HHHHHCCCCCCEEEEECEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDELDKQNAQNAFEAWENSLPDQGLVAFKKLAKTVHNHYDDIFAYWDAPFSITNGYTEGL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH
NGLIKMSNRLGRGYGYPIIRAKTLYSKEARKVGSGIRAGHGKVEYGPHIPTLLKQAESGE
HHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCC
LD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]