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The map label for this gene is intD [C]

Identifier: 78357906

GI number: 78357906

Start: 2851683

End: 2852936

Strand: Direct

Name: intD [C]

Synonym: Dde_2865

Alternate gene names: 78357906

Gene position: 2851683-2852936 (Clockwise)

Preceding gene: 78357905

Following gene: 78357907

Centisome position: 76.45

GC content: 52.07

Gene sequence:

>1254_bases
ATGGCGTTCAAATGGATCAAAACGAACATTAAGGGTATTCGCTACAGAGAGCATGACACTCGCAAGCATGGTATCAAAAA
AGACCGTTACTATACAATTCGATACCAAAGATCTGGACAACGCGTAGAAGAAGGTCTCGGCTGGGCATCCGAAGGATGGA
CACTGGACAAGGCTGTGGCGACACTGGCCAAGCTGCGCGAAGCTGCCACCACCGGAGAAGGCGAAACTCGCCTGCAAGAA
AAACGCAAAGCAGCGGAAGCCCAAAAAGCACTGAAAGAAAAAAAGAACATCACCTTTGCGACAATCTTAGCCGGATACCT
TGAGGCGGGTACGGAGAAAAAAAACACCCGCGTTCTGGCAGTGCAGAAAGGATACGGTGACAAGTGGCTTCTGCCAGACC
TCGGTCCCCTGCCCATACGGCAGGTGACCGCTGGCCATTTGGAACAGATTCAGAAACAGATTCTCGCTGCCGGTCGTTCA
AAGCAAACAGCAGCCCATGCCATAGACTTGTTCCGCGCTGCATGGAACTGGGCCTATAAACGTGAGTTGATCGAAGGCCG
CAACCCTGTCACGCAAATGGAGCGCATCCGCCCCGACGGTTCACGCGAGCGATTTTTCAGTGCTGCGGAACTGCAAAGCC
TACTTGGATGGCTGCACCGCAAAGACATACATACCTACCGCATCACTCTGTGCGCTGCCCACACGGGTGCGCGACTGGGT
GAACTGGCCCATCTGACATGGGACAGAGTCAACCTGCCTGACAGGCAGATCAACTTCATCCACACAAAATCAGGAGTCCC
CCGCTCTGTTCCAATGACACCGGAGTTGCATGATATGTTCTCTGACCTGCTCATGACTATGTCCTCGGCTAAAACTTCTG
GTATACCTTTAGGCACGAACTACACCCCTGCCGGACTTGCCGGAAAGATCGTGTTTCTCACCAAAGCCCGTAAGCCCTTT
TTTAAAGAAATTGAAGGCAGACTACGCACAGACACCCCAACAGCATTCAGATCAGCCCTGAGCGCCTTAAAACTTAACGA
GGGGCACGCAACAGCAAAAACAAAACTCACCTTCCACTGCCTGCGCCATACTGCCGCTACCTTGCTCCTTTCAAACGGTG
TAGACCCCGTTACTGTACAAAACATCATGGGTTGGTCTACCCTTAAAATGCTGGAACGCTATTCACATGCTATTCCAGCC
ACGAAGAGAAAAGCCATGGAAGCGTTATCTGCGGCTTTGAGCGGGGAGGGGTAA

Upstream 100 bases:

>100_bases
GACAACATTTCATTCTTTTCAATGTCACCCAAAATCACTCTTTTTCACTTGATTTTAGCAAAAAGTGGGGACAGAATGGG
GACAACTTTTTGGGGGTAGC

Downstream 100 bases:

>100_bases
AAGTTAACAGCAATATTGAGAACTAATACACCAACGTTCATCAACATAAGAAACAGTTATAAAATCAAGACTATTATGCA
CTTTCATCTTTCAGGTAATG

Product: site-specific recombinase XerD-like

Products: NA

Alternate protein names: Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase; Phage Integrase Family Protein; Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase; Integrase/Recombinase; Site Specific Recombinase; Site-Specific Recombinase XerD-Like

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MAFKWIKTNIKGIRYREHDTRKHGIKKDRYYTIRYQRSGQRVEEGLGWASEGWTLDKAVATLAKLREAATTGEGETRLQE
KRKAAEAQKALKEKKNITFATILAGYLEAGTEKKNTRVLAVQKGYGDKWLLPDLGPLPIRQVTAGHLEQIQKQILAAGRS
KQTAAHAIDLFRAAWNWAYKRELIEGRNPVTQMERIRPDGSRERFFSAAELQSLLGWLHRKDIHTYRITLCAAHTGARLG
ELAHLTWDRVNLPDRQINFIHTKSGVPRSVPMTPELHDMFSDLLMTMSSAKTSGIPLGTNYTPAGLAGKIVFLTKARKPF
FKEIEGRLRTDTPTAFRSALSALKLNEGHATAKTKLTFHCLRHTAATLLLSNGVDPVTVQNIMGWSTLKMLERYSHAIPA
TKRKAMEALSAALSGEG

Sequences:

>Translated_417_residues
MAFKWIKTNIKGIRYREHDTRKHGIKKDRYYTIRYQRSGQRVEEGLGWASEGWTLDKAVATLAKLREAATTGEGETRLQE
KRKAAEAQKALKEKKNITFATILAGYLEAGTEKKNTRVLAVQKGYGDKWLLPDLGPLPIRQVTAGHLEQIQKQILAAGRS
KQTAAHAIDLFRAAWNWAYKRELIEGRNPVTQMERIRPDGSRERFFSAAELQSLLGWLHRKDIHTYRITLCAAHTGARLG
ELAHLTWDRVNLPDRQINFIHTKSGVPRSVPMTPELHDMFSDLLMTMSSAKTSGIPLGTNYTPAGLAGKIVFLTKARKPF
FKEIEGRLRTDTPTAFRSALSALKLNEGHATAKTKLTFHCLRHTAATLLLSNGVDPVTVQNIMGWSTLKMLERYSHAIPA
TKRKAMEALSAALSGEG
>Mature_416_residues
AFKWIKTNIKGIRYREHDTRKHGIKKDRYYTIRYQRSGQRVEEGLGWASEGWTLDKAVATLAKLREAATTGEGETRLQEK
RKAAEAQKALKEKKNITFATILAGYLEAGTEKKNTRVLAVQKGYGDKWLLPDLGPLPIRQVTAGHLEQIQKQILAAGRSK
QTAAHAIDLFRAAWNWAYKRELIEGRNPVTQMERIRPDGSRERFFSAAELQSLLGWLHRKDIHTYRITLCAAHTGARLGE
LAHLTWDRVNLPDRQINFIHTKSGVPRSVPMTPELHDMFSDLLMTMSSAKTSGIPLGTNYTPAGLAGKIVFLTKARKPFF
KEIEGRLRTDTPTAFRSALSALKLNEGHATAKTKLTFHCLRHTAATLLLSNGVDPVTVQNIMGWSTLKMLERYSHAIPAT
KRKAMEALSAALSGEG

Specific function: Integrase From The Cryptic Lambdoic Prophage Dlp12. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From Th

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46761; Mature: 46629

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFKWIKTNIKGIRYREHDTRKHGIKKDRYYTIRYQRSGQRVEEGLGWASEGWTLDKAVA
CCCEEEECCCCCEEECCCCHHHCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCHHHHHH
TLAKLREAATTGEGETRLQEKRKAAEAQKALKEKKNITFATILAGYLEAGTEKKNTRVLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEE
VQKGYGDKWLLPDLGPLPIRQVTAGHLEQIQKQILAAGRSKQTAAHAIDLFRAAWNWAYK
EECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RELIEGRNPVTQMERIRPDGSRERFFSAAELQSLLGWLHRKDIHTYRITLCAAHTGARLG
HHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHH
ELAHLTWDRVNLPDRQINFIHTKSGVPRSVPMTPELHDMFSDLLMTMSSAKTSGIPLGTN
HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
YTPAGLAGKIVFLTKARKPFFKEIEGRLRTDTPTAFRSALSALKLNEGHATAKTKLTFHC
CCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
LRHTAATLLLSNGVDPVTVQNIMGWSTLKMLERYSHAIPATKRKAMEALSAALSGEG
HHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AFKWIKTNIKGIRYREHDTRKHGIKKDRYYTIRYQRSGQRVEEGLGWASEGWTLDKAVA
CCEEEECCCCCEEECCCCHHHCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCHHHHHH
TLAKLREAATTGEGETRLQEKRKAAEAQKALKEKKNITFATILAGYLEAGTEKKNTRVLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEE
VQKGYGDKWLLPDLGPLPIRQVTAGHLEQIQKQILAAGRSKQTAAHAIDLFRAAWNWAYK
EECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RELIEGRNPVTQMERIRPDGSRERFFSAAELQSLLGWLHRKDIHTYRITLCAAHTGARLG
HHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHH
ELAHLTWDRVNLPDRQINFIHTKSGVPRSVPMTPELHDMFSDLLMTMSSAKTSGIPLGTN
HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
YTPAGLAGKIVFLTKARKPFFKEIEGRLRTDTPTAFRSALSALKLNEGHATAKTKLTFHC
CCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
LRHTAATLLLSNGVDPVTVQNIMGWSTLKMLERYSHAIPATKRKAMEALSAALSGEG
HHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA