| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357894
Identifier: 78357894
GI number: 78357894
Start: 2840276
End: 2841445
Strand: Reverse
Name: 78357894
Synonym: Dde_2853
Alternate gene names: NA
Gene position: 2841445-2840276 (Counterclockwise)
Preceding gene: 78357895
Following gene: 78357892
Centisome position: 76.17
GC content: 64.79
Gene sequence:
>1170_bases ATGGCCTCGATGATTGTTCTGGAAGATTCTCCTGCGGTGCTGCGCATCGGGCCCGGTGCGGAGCACCGCGTCTCGGTGGC GGTGGTGGCTTTGCTGGGCACCGGAATGATGGGGGGCGCGGTGCTGGCAGCAGGCGATCCGGCGCTTACGGCTGTCTGCA TTATCGGCGGGGTGGTGCTGGGGCTGGTGGCTTTGATGCTGCATAATCAGTCGCGGCAGCTGGAATGGAATCTGGACGAG CGTATGGTGTATGTTCTGGGCAGGCAGGCTTCGGACATGTATGCAGTGCCTTTTGCCGATATCGCCTGCCTGCGTCTGAC AAAACGAAGGGTGGCCCGCAGTCTGGCGGGGGCTTCCATCACCTCGCAGCCGCCGGGCGGCCGTCGCGGGCGGGAACGCT ATTATCTGGAAATGGCCATGCGTGACACCGGGTATGAAGGTATTGACCAGTCGTTCAACGAGTCCGAGCTGCGCGGGCTG TGCACGGTGCTGTGCCGGCGCACGGGGCTTGCGCTGTGTGACGAAACAGACGGGACCCGTAACCGTCCGGCCGCGGGCGA TGCCGTGTCCTCTGTGGTGCTGCCCCCGCGCGAACCTTCACCCGCTTCGGTACTGCGCAGAACGGCACAGGGAGTCGAAT GGCCGCTTTCGCCGGGGTGGCCGGCCGTGGGGGTTATGTTCATGGTGCTTGCCAGCCTGATGGCCGGTGCGGGCTCCGCC TATACGCACGTCGCGGCGGGAGGGGACGCCAGCCCCGCGCTGATGATCATGGCGCTGGGCATTTCGTTTTTTTTCATGGT CATAGTGCTGGCGCGGCTGGCCCATGCCTTTACGGGGCGCGGCAGAATAACGGTACGCGGCGGGGTGCTGGTGCGGGAGC TGCTGAGCCCGCTGGGTAACAGAAGTCTGGAAGTTTCGCTGCGCGAAGTGGTGGCGTTGCGCGTCATTGCCCCGCGCACG GCTGTCTGTCAGCTTCAGGTGCTGGGCCGTACGGGACAGGCGGCAGTGCTGGCCAGTGTTTCCAGCGGGGTCACGCCGCT TACGGTGGGCGATCTGTACTGGCTGCGCGGTACGCTCAACCGTATGCTCGACCTGCAGCGCGCGGCAGAGCATGAAGAGC ACCGCAGAAAGCAGGTCATGGAACAGGATTCTTCCGGCCCGCTGCAGTAG
Upstream 100 bases:
>100_bases GGAAGAAACGTATCGGTAAGCGGAGGCCGGAGCAGTTGCTCCGGCCTTTTTGTAAACGCGCCGCCGCAGGAATGCGGCGG AATGTGACGGGGGAGAGCGC
Downstream 100 bases:
>100_bases CGGCTGCACGGGTCTGCCGTCGGGTGTTGGCCGCCGCGGCTGTCCGGCCGCGGTGCTGTGCCACAGGCCGCAGTGTTCAT TCGGGCAGATTTTTACGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MASMIVLEDSPAVLRIGPGAEHRVSVAVVALLGTGMMGGAVLAAGDPALTAVCIIGGVVLGLVALMLHNQSRQLEWNLDE RMVYVLGRQASDMYAVPFADIACLRLTKRRVARSLAGASITSQPPGGRRGRERYYLEMAMRDTGYEGIDQSFNESELRGL CTVLCRRTGLALCDETDGTRNRPAAGDAVSSVVLPPREPSPASVLRRTAQGVEWPLSPGWPAVGVMFMVLASLMAGAGSA YTHVAAGGDASPALMIMALGISFFFMVIVLARLAHAFTGRGRITVRGGVLVRELLSPLGNRSLEVSLREVVALRVIAPRT AVCQLQVLGRTGQAAVLASVSSGVTPLTVGDLYWLRGTLNRMLDLQRAAEHEEHRRKQVMEQDSSGPLQ
Sequences:
>Translated_389_residues MASMIVLEDSPAVLRIGPGAEHRVSVAVVALLGTGMMGGAVLAAGDPALTAVCIIGGVVLGLVALMLHNQSRQLEWNLDE RMVYVLGRQASDMYAVPFADIACLRLTKRRVARSLAGASITSQPPGGRRGRERYYLEMAMRDTGYEGIDQSFNESELRGL CTVLCRRTGLALCDETDGTRNRPAAGDAVSSVVLPPREPSPASVLRRTAQGVEWPLSPGWPAVGVMFMVLASLMAGAGSA YTHVAAGGDASPALMIMALGISFFFMVIVLARLAHAFTGRGRITVRGGVLVRELLSPLGNRSLEVSLREVVALRVIAPRT AVCQLQVLGRTGQAAVLASVSSGVTPLTVGDLYWLRGTLNRMLDLQRAAEHEEHRRKQVMEQDSSGPLQ >Mature_388_residues ASMIVLEDSPAVLRIGPGAEHRVSVAVVALLGTGMMGGAVLAAGDPALTAVCIIGGVVLGLVALMLHNQSRQLEWNLDER MVYVLGRQASDMYAVPFADIACLRLTKRRVARSLAGASITSQPPGGRRGRERYYLEMAMRDTGYEGIDQSFNESELRGLC TVLCRRTGLALCDETDGTRNRPAAGDAVSSVVLPPREPSPASVLRRTAQGVEWPLSPGWPAVGVMFMVLASLMAGAGSAY THVAAGGDASPALMIMALGISFFFMVIVLARLAHAFTGRGRITVRGGVLVRELLSPLGNRSLEVSLREVVALRVIAPRTA VCQLQVLGRTGQAAVLASVSSGVTPLTVGDLYWLRGTLNRMLDLQRAAEHEEHRRKQVMEQDSSGPLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41480; Mature: 41349
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMIVLEDSPAVLRIGPGAEHRVSVAVVALLGTGMMGGAVLAAGDPALTAVCIIGGVVL CCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH GLVALMLHNQSRQLEWNLDERMVYVLGRQASDMYAVPFADIACLRLTKRRVARSLAGASI HHHHHHHCCCCCCEEECHHHHEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCC TSQPPGGRRGRERYYLEMAMRDTGYEGIDQSFNESELRGLCTVLCRRTGLALCDETDGTR CCCCCCCCCCCHHEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCC NRPAAGDAVSSVVLPPREPSPASVLRRTAQGVEWPLSPGWPAVGVMFMVLASLMAGAGSA CCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC YTHVAAGGDASPALMIMALGISFFFMVIVLARLAHAFTGRGRITVRGGVLVRELLSPLGN CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCC RSLEVSLREVVALRVIAPRTAVCQLQVLGRTGQAAVLASVSSGVTPLTVGDLYWLRGTLN CEEEHHHHHHHHHHHCCCCHHHEEEEEECCCCCHHHEEHHHCCCCCEEHHHHHHHHHHHH RMLDLQRAAEHEEHRRKQVMEQDSSGPLQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ASMIVLEDSPAVLRIGPGAEHRVSVAVVALLGTGMMGGAVLAAGDPALTAVCIIGGVVL CCEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH GLVALMLHNQSRQLEWNLDERMVYVLGRQASDMYAVPFADIACLRLTKRRVARSLAGASI HHHHHHHCCCCCCEEECHHHHEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCC TSQPPGGRRGRERYYLEMAMRDTGYEGIDQSFNESELRGLCTVLCRRTGLALCDETDGTR CCCCCCCCCCCHHEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCC NRPAAGDAVSSVVLPPREPSPASVLRRTAQGVEWPLSPGWPAVGVMFMVLASLMAGAGSA CCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC YTHVAAGGDASPALMIMALGISFFFMVIVLARLAHAFTGRGRITVRGGVLVRELLSPLGN CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCC RSLEVSLREVVALRVIAPRTAVCQLQVLGRTGQAAVLASVSSGVTPLTVGDLYWLRGTLN CEEEHHHHHHHHHHHCCCCHHHEEEEEECCCCCHHHEEHHHCCCCCEEHHHHHHHHHHHH RMLDLQRAAEHEEHRRKQVMEQDSSGPLQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA