| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357881
Identifier: 78357881
GI number: 78357881
Start: 2828111
End: 2829382
Strand: Direct
Name: 78357881
Synonym: Dde_2840
Alternate gene names: NA
Gene position: 2828111-2829382 (Clockwise)
Preceding gene: 78357873
Following gene: 78357882
Centisome position: 75.82
GC content: 62.19
Gene sequence:
>1272_bases ATGAGCGGAAGAACGATGTCAAGCATCTATATATTGTGGGACGCCTCGCATATCTGGGGGCTGCTGGCGTGGCGCACTGC GCAGTCCCTCGACCTGCCCTACCGGCTTGTCAGGGGGGAAGAAATAGCGCAGGGACTGCTTTCTGGCAAGCCGCCCGCAC TGCTGCTGGTTCCCGGCGGCAACGCCCGCATGAAATCCGTGGCGCTGGGAGCCGCCGGAATGCAGGCCATCCGCGACTAT GTCCGCGGCGGCGGGGCTTATGTAGGGTTCTGCGGCGGGGCCGGTCTGGGGCTTTCCGGCAGCGAGGGGCTGGGGCTGTG CCCGTGGGGGCGTGCCCGCTTTACCGACAGAATGCAGCATTTTGTCAGCGGCCATGTGCATGCCCGCGTGGCGCGGGGCC ATGACCTTGTTCCCGCAGACCTGTGCACGGATGCCTGCGCCGAGCCGCCGGTGCCCATCTGGTGGCCGGGCAGATTTGCG CCGGAAAAAACCGGCGACGTGGAAGTACTGGCCACATACACCACTCCCTGCGACGATTTCTGGGTGGCAGACCTGCCGCT GGATACGCTGCCCCCCGGCACGTTTTCAGAGTGGGAATCACTGTACGACATCCGGCTGCGGCCCACTTTTCTGGAAGATC AGCCCTGCATACTTTCCGGACGGTACGGCAAAGGCCGCTATGTGCTCAGCTACACACATCTGGAAACGCCTGATTCACCC ACGGCAAACCGCTGGCTGCTGCACATCATCCGCACGCTGGGGGGCATAGAACCGCCTCTGCAGCGCGTTCCCGCATGGGA TCTGGAAAACCAGCAGGCCGCATGGCTCGACCCCGACCTGCTGCATGCCCGCGGCATCTTCGACGACATTGTCACCATAG GACGCAACCACTGTCTGTTTTTCAAACGCAACGCATGGCTTATAGGCTGGCGTGCGGGCATACCCGGCGCAAACCTCAAC AACCTGTATGCCGCTGTGGTCACAGCAGTATCCAACCCGCCCACCGCCGAATGCACTGCATACTGGCAGGAACAGCGGCA GCCGTTCATGCGCAAGCTGGCCCTGTTCCACGAAGGAGTGAAAGGATACCTGCTGGCAGAACGACTTGCCATGACGCTTT CAAAAACATTTCCGGAAACCGTGTCGCGTGAATCGCTGCGCAACCAGCGTGCAGCGCTGTTCGGGCCTCCCATGGACAGC GGCGGATTGTATCAGGAACTGCTCGATACACTGGACGAACTGCTGTACCGGCAGCTGCCCCACGGCCTGTAG
Upstream 100 bases:
>100_bases CGTGAGCCTTTTGCAATTACCGGCGGGGATTGGTAAGATACCCGAATATACAGACAAACCGTATGGCTGCGCCTGACGGC AGCCAAGTGGTCAACTCTTA
Downstream 100 bases:
>100_bases ACAGCGGAAAACACGCCGCGGTGCCGCACCGCGGCTGCAGCCATGGACACCAGACACCCGCGCATCATTTCGGCATCGCG CCGCACCGACCTGCCCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSGRTMSSIYILWDASHIWGLLAWRTAQSLDLPYRLVRGEEIAQGLLSGKPPALLLVPGGNARMKSVALGAAGMQAIRDY VRGGGAYVGFCGGAGLGLSGSEGLGLCPWGRARFTDRMQHFVSGHVHARVARGHDLVPADLCTDACAEPPVPIWWPGRFA PEKTGDVEVLATYTTPCDDFWVADLPLDTLPPGTFSEWESLYDIRLRPTFLEDQPCILSGRYGKGRYVLSYTHLETPDSP TANRWLLHIIRTLGGIEPPLQRVPAWDLENQQAAWLDPDLLHARGIFDDIVTIGRNHCLFFKRNAWLIGWRAGIPGANLN NLYAAVVTAVSNPPTAECTAYWQEQRQPFMRKLALFHEGVKGYLLAERLAMTLSKTFPETVSRESLRNQRAALFGPPMDS GGLYQELLDTLDELLYRQLPHGL
Sequences:
>Translated_423_residues MSGRTMSSIYILWDASHIWGLLAWRTAQSLDLPYRLVRGEEIAQGLLSGKPPALLLVPGGNARMKSVALGAAGMQAIRDY VRGGGAYVGFCGGAGLGLSGSEGLGLCPWGRARFTDRMQHFVSGHVHARVARGHDLVPADLCTDACAEPPVPIWWPGRFA PEKTGDVEVLATYTTPCDDFWVADLPLDTLPPGTFSEWESLYDIRLRPTFLEDQPCILSGRYGKGRYVLSYTHLETPDSP TANRWLLHIIRTLGGIEPPLQRVPAWDLENQQAAWLDPDLLHARGIFDDIVTIGRNHCLFFKRNAWLIGWRAGIPGANLN NLYAAVVTAVSNPPTAECTAYWQEQRQPFMRKLALFHEGVKGYLLAERLAMTLSKTFPETVSRESLRNQRAALFGPPMDS GGLYQELLDTLDELLYRQLPHGL >Mature_422_residues SGRTMSSIYILWDASHIWGLLAWRTAQSLDLPYRLVRGEEIAQGLLSGKPPALLLVPGGNARMKSVALGAAGMQAIRDYV RGGGAYVGFCGGAGLGLSGSEGLGLCPWGRARFTDRMQHFVSGHVHARVARGHDLVPADLCTDACAEPPVPIWWPGRFAP EKTGDVEVLATYTTPCDDFWVADLPLDTLPPGTFSEWESLYDIRLRPTFLEDQPCILSGRYGKGRYVLSYTHLETPDSPT ANRWLLHIIRTLGGIEPPLQRVPAWDLENQQAAWLDPDLLHARGIFDDIVTIGRNHCLFFKRNAWLIGWRAGIPGANLNN LYAAVVTAVSNPPTAECTAYWQEQRQPFMRKLALFHEGVKGYLLAERLAMTLSKTFPETVSRESLRNQRAALFGPPMDSG GLYQELLDTLDELLYRQLPHGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46860; Mature: 46729
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRTMSSIYILWDASHIWGLLAWRTAQSLDLPYRLVRGEEIAQGLLSGKPPALLLVPGG CCCCEEEEEEEEEECHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCEEEEECCC NARMKSVALGAAGMQAIRDYVRGGGAYVGFCGGAGLGLSGSEGLGLCPWGRARFTDRMQH CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH FVSGHVHARVARGHDLVPADLCTDACAEPPVPIWWPGRFAPEKTGDVEVLATYTTPCDDF HHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCC WVADLPLDTLPPGTFSEWESLYDIRLRPTFLEDQPCILSGRYGKGRYVLSYTHLETPDSP EEECCCCCCCCCCCHHHHHHHEEEEECCCEECCCCCEEECCCCCCEEEEEEEECCCCCCC TANRWLLHIIRTLGGIEPPLQRVPAWDLENQQAAWLDPDLLHARGIFDDIVTIGRNHCLF CHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE FKRNAWLIGWRAGIPGANLNNLYAAVVTAVSNPPTAECTAYWQEQRQPFMRKLALFHEGV EECCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH KGYLLAERLAMTLSKTFPETVSRESLRNQRAALFGPPMDSGGLYQELLDTLDELLYRQLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCC HGL CCC >Mature Secondary Structure SGRTMSSIYILWDASHIWGLLAWRTAQSLDLPYRLVRGEEIAQGLLSGKPPALLLVPGG CCCEEEEEEEEEECHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCCCEEEEECCC NARMKSVALGAAGMQAIRDYVRGGGAYVGFCGGAGLGLSGSEGLGLCPWGRARFTDRMQH CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH FVSGHVHARVARGHDLVPADLCTDACAEPPVPIWWPGRFAPEKTGDVEVLATYTTPCDDF HHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCC WVADLPLDTLPPGTFSEWESLYDIRLRPTFLEDQPCILSGRYGKGRYVLSYTHLETPDSP EEECCCCCCCCCCCHHHHHHHEEEEECCCEECCCCCEEECCCCCCEEEEEEEECCCCCCC TANRWLLHIIRTLGGIEPPLQRVPAWDLENQQAAWLDPDLLHARGIFDDIVTIGRNHCLF CHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE FKRNAWLIGWRAGIPGANLNNLYAAVVTAVSNPPTAECTAYWQEQRQPFMRKLALFHEGV EECCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH KGYLLAERLAMTLSKTFPETVSRESLRNQRAALFGPPMDSGGLYQELLDTLDELLYRQLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCC HGL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA