| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is livK [C]
Identifier: 78357872
GI number: 78357872
Start: 2816973
End: 2818100
Strand: Direct
Name: livK [C]
Synonym: Dde_2831
Alternate gene names: 78357872
Gene position: 2816973-2818100 (Clockwise)
Preceding gene: 78357864
Following gene: 78357873
Centisome position: 75.52
GC content: 61.97
Gene sequence:
>1128_bases ATGCCATATCCTCGCGGCCGAACATTGTTTGCGCTCACACTGGGGGCAGCATGCCTGCTGATGGCGGCAGCCCTGTATCT GGCAACGCCTCCCGGTGACATTCTGGTGGGCTTTTCCGGCCCGCTGGAAGGAAAATTCTCCGACCTCGGCGTGGAAGGCC GTAACGCCGCGCAGCTGGCCATCGAAGACATCAACGCCGCAGGCGGTATTGACGGGCGGCGGCTGCGCCTTGTCACCGCA CATGACGGTTACACGCAAAAAGACGCGGTGGAGGCCGACAGCCATCTTGCCGGACAGCGGGTGGCCGCCGTCATAGGGCA CATGACCAGCAGCCAGCAGCTGGCCGTGATGGCCGTGCACAGGTCTGTGGTCTATGTCTCGCCCACGGTCTCCACGTATC AGCTTACCGGCATGGATGACAATTTTTTCCGTGTCATTGCAGACAACGACGCCACAGCCCGTGATCTGGGCCTGTTTGCC GCCTCCCGCGGGGTGCAGACGGCCGTGGCCCTGCTGGACACGGTGAATGAAGATTTTTCACGGACGTTTATCAACGCTGC GGCCAGAGGCTTCACCTCGGCGGGAGGCACGGTAGTCAACATCATTCCGTTTTCCTCGTCCGTTCCTTCTTCGCTGCTGG ATGCCGCCGCCTCGGCCGCTGATTCCGGCGCGCAGGCCGTATTTGTGGCGGCTTCTGCGCGTGACACCGCGTTTGTGCTG GCCCAGATGGCCCAGAACGGATTCTCGGGCCCGAAGTTCTCCTCCACATGGGCACTGACTCCCGCGCTGATAGCACAGGG CGGTACCGCAGTGGAAGACACGTTCTTCTGCCATCCTTATCCCACACTGGCCGAACTGCCCGCCCACCGCAACTTCATCA GCCGGTTCAGCGAGCGGTTCGGCTGGGAACCGAGCTTTCCGGGCCTGTTTGCCTATACCGCCGTGCGGTTGCTGCAGCGC GGGCTGGAAAAAACACAGGGACGGACGGCGGGCCTGCGTGAAGCCCTGAAAAGTATCAGACAACTGGATGGTCTGTGCGG CCCCATCACGCTGGATGCATACGGAGACGCACACATGCCGTTCTTCATTTCCACAGTGCGCAACGGCGCATTCGAGCCGG TACGATGA
Upstream 100 bases:
>100_bases TGTCCGGTTATAAGGGGTTGCAAAAGCGGTGCATCAAAGTGATACTATAAGTATACAGCCACAGCCATCCGGCCGGTGCC GGAGCACAGGGGGAAAAAGT
Downstream 100 bases:
>100_bases AAACCACCCAGCTGCCTTCGCTTTCGCGGACCATGTCTGTCAAGCTTATCCGCTGGATGTGCGTGCTGGGAATGCTCTGC GCGCTTTTTCTGGCCGCATT
Product: substrate-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MPYPRGRTLFALTLGAACLLMAAALYLATPPGDILVGFSGPLEGKFSDLGVEGRNAAQLAIEDINAAGGIDGRRLRLVTA HDGYTQKDAVEADSHLAGQRVAAVIGHMTSSQQLAVMAVHRSVVYVSPTVSTYQLTGMDDNFFRVIADNDATARDLGLFA ASRGVQTAVALLDTVNEDFSRTFINAAARGFTSAGGTVVNIIPFSSSVPSSLLDAAASAADSGAQAVFVAASARDTAFVL AQMAQNGFSGPKFSSTWALTPALIAQGGTAVEDTFFCHPYPTLAELPAHRNFISRFSERFGWEPSFPGLFAYTAVRLLQR GLEKTQGRTAGLREALKSIRQLDGLCGPITLDAYGDAHMPFFISTVRNGAFEPVR
Sequences:
>Translated_375_residues MPYPRGRTLFALTLGAACLLMAAALYLATPPGDILVGFSGPLEGKFSDLGVEGRNAAQLAIEDINAAGGIDGRRLRLVTA HDGYTQKDAVEADSHLAGQRVAAVIGHMTSSQQLAVMAVHRSVVYVSPTVSTYQLTGMDDNFFRVIADNDATARDLGLFA ASRGVQTAVALLDTVNEDFSRTFINAAARGFTSAGGTVVNIIPFSSSVPSSLLDAAASAADSGAQAVFVAASARDTAFVL AQMAQNGFSGPKFSSTWALTPALIAQGGTAVEDTFFCHPYPTLAELPAHRNFISRFSERFGWEPSFPGLFAYTAVRLLQR GLEKTQGRTAGLREALKSIRQLDGLCGPITLDAYGDAHMPFFISTVRNGAFEPVR >Mature_374_residues PYPRGRTLFALTLGAACLLMAAALYLATPPGDILVGFSGPLEGKFSDLGVEGRNAAQLAIEDINAAGGIDGRRLRLVTAH DGYTQKDAVEADSHLAGQRVAAVIGHMTSSQQLAVMAVHRSVVYVSPTVSTYQLTGMDDNFFRVIADNDATARDLGLFAA SRGVQTAVALLDTVNEDFSRTFINAAARGFTSAGGTVVNIIPFSSSVPSSLLDAAASAADSGAQAVFVAASARDTAFVLA QMAQNGFSGPKFSSTWALTPALIAQGGTAVEDTFFCHPYPTLAELPAHRNFISRFSERFGWEPSFPGLFAYTAVRLLQRG LEKTQGRTAGLREALKSIRQLDGLCGPITLDAYGDAHMPFFISTVRNGAFEPVR
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39661; Mature: 39530
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYPRGRTLFALTLGAACLLMAAALYLATPPGDILVGFSGPLEGKFSDLGVEGRNAAQLA CCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHCCCCCCCHHEEE IEDINAAGGIDGRRLRLVTAHDGYTQKDAVEADSHLAGQRVAAVIGHMTSSQQLAVMAVH EEHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE RSVVYVSPTVSTYQLTGMDDNFFRVIADNDATARDLGLFAASRGVQTAVALLDTVNEDFS CEEEEEECCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH RTFINAAARGFTSAGGTVVNIIPFSSSVPSSLLDAAASAADSGAQAVFVAASARDTAFVL HHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH AQMAQNGFSGPKFSSTWALTPALIAQGGTAVEDTFFCHPYPTLAELPAHRNFISRFSERF HHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCHHHHCCHHHHHHHHHHHHC GWEPSFPGLFAYTAVRLLQRGLEKTQGRTAGLREALKSIRQLDGLCGPITLDAYGDAHMP CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC FFISTVRNGAFEPVR HHHHHHHCCCCCCCC >Mature Secondary Structure PYPRGRTLFALTLGAACLLMAAALYLATPPGDILVGFSGPLEGKFSDLGVEGRNAAQLA CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHCCCCCCCHHEEE IEDINAAGGIDGRRLRLVTAHDGYTQKDAVEADSHLAGQRVAAVIGHMTSSQQLAVMAVH EEHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE RSVVYVSPTVSTYQLTGMDDNFFRVIADNDATARDLGLFAASRGVQTAVALLDTVNEDFS CEEEEEECCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH RTFINAAARGFTSAGGTVVNIIPFSSSVPSSLLDAAASAADSGAQAVFVAASARDTAFVL HHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH AQMAQNGFSGPKFSSTWALTPALIAQGGTAVEDTFFCHPYPTLAELPAHRNFISRFSERF HHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCHHHHCCHHHHHHHHHHHHC GWEPSFPGLFAYTAVRLLQRGLEKTQGRTAGLREALKSIRQLDGLCGPITLDAYGDAHMP CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC FFISTVRNGAFEPVR HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]