| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357870
Identifier: 78357870
GI number: 78357870
Start: 2815034
End: 2816224
Strand: Reverse
Name: 78357870
Synonym: Dde_2829
Alternate gene names: NA
Gene position: 2816224-2815034 (Counterclockwise)
Preceding gene: 78357871
Following gene: 78357869
Centisome position: 75.5
GC content: 56.93
Gene sequence:
>1191_bases ATGTCCAGTGTTCTTCCTGTCTCTCCCGCCGAGGAGAGAAGCGCGGTGGATAACCGCCGCATGCTTGTTTTTCTTGTGGT TCTTGCATTGTGCTCCGCATTTGCCTTTCAGGGCTGGCGTACCCTTTTGAACAACTATGCTGTCGAAACCGCAGGGCTTT CTGGTCTGCAGATGGGGATTGTACAGTCTCTGCGCGAGGTTCCCGGCTTTATGGCGCTGGGTGTGGTTTTTCTGCTTTTG CTGGCGCGCGAACACCGCCTTGCGGCGGTTTCGGTGTGCATCATGGGGGGCGGCGTCATGCTGGCGGGGCAGTTTCCCAC ATTCGGGGGAGTTGCGGCCACCACCATGTTGATGTCCTTCGGGTTTCATTATTACGAAACCCTTAATCAGTCTCTGACCC TGCAGTATTTCGGCAAAAAAGAAGCCCCTGTCATCATGGGGCGCATACGCGGGTTCACTGCCGGAGCAAACCTGGCTGTG GGCGGCACCATCGCGCTGCTTTCTCTGTGGCTGCCCTACAGCGCCATTTTTGTGGTGGTGGGCGGTGTGGCAGTGTGCGG AGGGGTGTGGGCGCTGCGGCAGAATCCGGCCAGCCCCACGGCGCCCAGACAGAACAAAGGGATCGTTCTGCGTGGCCGGT ACTGGCTTTTTTACCTGCTTACCTTTCTGAGCGGGGCGCGCAGGCAGATTTTTGTCGCGTTTGCCGTATTTCTGCTGGTT GACCGTTTCGGTTTCGGTATCGGCGAAATCACGGCGCTGTTTATTGTGAACAACGTGGTCAACTGGTTTCTCAGCCCTGC CATAGGGCGGGCAGTGAACCGGTACGGCGAGCGCGCTGTACTGACTCTGGAATATGCCGCGCTGCTTTTTGTTTTTCTGG GATATGCCGTGGCGTGGAGCAAGTGGCAGGTGGCCGCACTGTATGTGATAGACCACATATTCTATAATTTTGCGCTGGCC ATCAGAAGCTATTTTCAGAAAGTGGCCGATCCGGCGGATATCGCGCCCAGCATGGCGGCCAGCTTTACCATCAACCATAT AGGTGCGGTCATTCTGCCCGCGCTGGGCGGTTATCTGTGGATGGTCGATTACCGCATACCGTTTCTGGGGGCTGCCGGAC TGGCGTTGTGCTCGCTTGTTTTTGTTCAGCTTATTCCGCACAGTATGCGCAAGGCCGGTGTAGCTGCCTGA
Upstream 100 bases:
>100_bases CTGGTTCGAGGCCGTCATCATCCGCTGACGTCTTTGCTGCAGAAGCGCAGGCACTTCAGCAGGGACCTGCGCATCATGTT TTTTTACGGAGCAGACTTAT
Downstream 100 bases:
>100_bases CGGGGCGGCGTCATGCGGCCGGTTTGCAGGCCGGGGGATTCTTGTCTCGAAACCGGCATGGGGCTATTGTTATGCTGCGG TGCGGTTTAATCACAAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Transporter MFS Superfamily; Permease Facilitator Superfamily; Permease Of Facilitator Superfamily; Facilitator Superfamily Permease; MFS Protein Permease Component; Multidrug-Efflux Transporter MFS Family; Facilitator Family Transporter
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSSVLPVSPAEERSAVDNRRMLVFLVVLALCSAFAFQGWRTLLNNYAVETAGLSGLQMGIVQSLREVPGFMALGVVFLLL LAREHRLAAVSVCIMGGGVMLAGQFPTFGGVAATTMLMSFGFHYYETLNQSLTLQYFGKKEAPVIMGRIRGFTAGANLAV GGTIALLSLWLPYSAIFVVVGGVAVCGGVWALRQNPASPTAPRQNKGIVLRGRYWLFYLLTFLSGARRQIFVAFAVFLLV DRFGFGIGEITALFIVNNVVNWFLSPAIGRAVNRYGERAVLTLEYAALLFVFLGYAVAWSKWQVAALYVIDHIFYNFALA IRSYFQKVADPADIAPSMAASFTINHIGAVILPALGGYLWMVDYRIPFLGAAGLALCSLVFVQLIPHSMRKAGVAA
Sequences:
>Translated_396_residues MSSVLPVSPAEERSAVDNRRMLVFLVVLALCSAFAFQGWRTLLNNYAVETAGLSGLQMGIVQSLREVPGFMALGVVFLLL LAREHRLAAVSVCIMGGGVMLAGQFPTFGGVAATTMLMSFGFHYYETLNQSLTLQYFGKKEAPVIMGRIRGFTAGANLAV GGTIALLSLWLPYSAIFVVVGGVAVCGGVWALRQNPASPTAPRQNKGIVLRGRYWLFYLLTFLSGARRQIFVAFAVFLLV DRFGFGIGEITALFIVNNVVNWFLSPAIGRAVNRYGERAVLTLEYAALLFVFLGYAVAWSKWQVAALYVIDHIFYNFALA IRSYFQKVADPADIAPSMAASFTINHIGAVILPALGGYLWMVDYRIPFLGAAGLALCSLVFVQLIPHSMRKAGVAA >Mature_395_residues SSVLPVSPAEERSAVDNRRMLVFLVVLALCSAFAFQGWRTLLNNYAVETAGLSGLQMGIVQSLREVPGFMALGVVFLLLL AREHRLAAVSVCIMGGGVMLAGQFPTFGGVAATTMLMSFGFHYYETLNQSLTLQYFGKKEAPVIMGRIRGFTAGANLAVG GTIALLSLWLPYSAIFVVVGGVAVCGGVWALRQNPASPTAPRQNKGIVLRGRYWLFYLLTFLSGARRQIFVAFAVFLLVD RFGFGIGEITALFIVNNVVNWFLSPAIGRAVNRYGERAVLTLEYAALLFVFLGYAVAWSKWQVAALYVIDHIFYNFALAI RSYFQKVADPADIAPSMAASFTINHIGAVILPALGGYLWMVDYRIPFLGAAGLALCSLVFVQLIPHSMRKAGVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42980; Mature: 42849
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVLPVSPAEERSAVDNRRMLVFLVVLALCSAFAFQGWRTLLNNYAVETAGLSGLQMGI CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VQSLREVPGFMALGVVFLLLLAREHRLAAVSVCIMGGGVMLAGQFPTFGGVAATTMLMSF HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH GFHYYETLNQSLTLQYFGKKEAPVIMGRIRGFTAGANLAVGGTIALLSLWLPYSAIFVVV HHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHH GGVAVCGGVWALRQNPASPTAPRQNKGIVLRGRYWLFYLLTFLSGARRQIFVAFAVFLLV HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHHH DRFGFGIGEITALFIVNNVVNWFLSPAIGRAVNRYGERAVLTLEYAALLFVFLGYAVAWS HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHC KWQVAALYVIDHIFYNFALAIRSYFQKVADPADIAPSMAASFTINHIGAVILPALGGYLW CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCEE MVDYRIPFLGAAGLALCSLVFVQLIPHSMRKAGVAA EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSVLPVSPAEERSAVDNRRMLVFLVVLALCSAFAFQGWRTLLNNYAVETAGLSGLQMGI CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VQSLREVPGFMALGVVFLLLLAREHRLAAVSVCIMGGGVMLAGQFPTFGGVAATTMLMSF HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH GFHYYETLNQSLTLQYFGKKEAPVIMGRIRGFTAGANLAVGGTIALLSLWLPYSAIFVVV HHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHH GGVAVCGGVWALRQNPASPTAPRQNKGIVLRGRYWLFYLLTFLSGARRQIFVAFAVFLLV HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHHH DRFGFGIGEITALFIVNNVVNWFLSPAIGRAVNRYGERAVLTLEYAALLFVFLGYAVAWS HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHC KWQVAALYVIDHIFYNFALAIRSYFQKVADPADIAPSMAASFTINHIGAVILPALGGYLW CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCEE MVDYRIPFLGAAGLALCSLVFVQLIPHSMRKAGVAA EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA