| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78357868
Identifier: 78357868
GI number: 78357868
Start: 2813582
End: 2814409
Strand: Reverse
Name: 78357868
Synonym: Dde_2827
Alternate gene names: NA
Gene position: 2814409-2813582 (Counterclockwise)
Preceding gene: 78357869
Following gene: 78357867
Centisome position: 75.45
GC content: 59.42
Gene sequence:
>828_bases ATGGACAAGCATCTGCTGGTGGCGGTGAGCGAACACAGGGAATCTTCGGCCGGAGTGCGTTTTGCCTGCAGTCTGTTTAA TGGTTCCGCCGGAGTGCGCATGACGCTGCTGCATGTGCTGGGTACGGCAGGACAGGATGCTGCAGCGGCTGCCGCCATGC AGCGCAGAGCTGCAGACATGCTGCACGGTGTGCGTCAATGGGCGGAAGGACAGGGCGTTTTGCCTGCAGATATTGAAACG CTGGTGCTGCCGCGCCGGTACGGCGTGCTGCGCGACATTGTGGATACCGCCCGCAAAGGACTGTACGATGCCGTGGTGGT GGGGGGGCGTTATCTGAGCAGACTGGAACAGATGTATGAAGACAGTGTGAGCCGCGGTCTGCTGTGGGAGTCCGTTGATT TTCCCGTATGGATATGCCACCAGCCGGACGCTTCAAGACGTAACGTGCTGCTGTGTCTGGACGGCGAAGAGCCTTCTTAC CGCATTGCGGACCATGCGGGGTTCATGCTGCGCGACTGTGCGGGGCATGCGTTCACTCTGCTGCATTTCAACCGTGCCCG GACCGCTGCGGAAGAAGTGCTGGAACGCGGCCGCATGCTGCTGGAAGAAAACGGTGTGGGCAAAGACCGCATTGAAACGC TGGTCATGGAAAGCTCCGATCATGTGGAGAGCATTTTGAATGTGGCTGACCGGGGGCACTATGCCGTTGTGGCGGCGGGC CGTAACAAACGTCAGCCGGATTCTTTTTTCAACAGGCTGTTCACGCGTTCCGTCACCATGCGGCTGCGTGATAACACCCA GCGGTTTGCCCTGTGGGTGAGTCAGTAG
Upstream 100 bases:
>100_bases AGGATACGGCGAAAGCGCTGGCACTGAAGCTTGCCGAGCGCACAGACGGTATCGGCGTGAAGTATTCATATCTGTTCGAC CGCTGATGCGGAGGTGACGC
Downstream 100 bases:
>100_bases GGGACAGCGTGGACAACAACGGATATCTGACGCACTGCGGGCGGCCTGATACTGAACGGGAACGTCCCGGCGTGCTGCTG GACACCTCGCCCGTGGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; Universal Stress Protein UspA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MDKHLLVAVSEHRESSAGVRFACSLFNGSAGVRMTLLHVLGTAGQDAAAAAAMQRRAADMLHGVRQWAEGQGVLPADIET LVLPRRYGVLRDIVDTARKGLYDAVVVGGRYLSRLEQMYEDSVSRGLLWESVDFPVWICHQPDASRRNVLLCLDGEEPSY RIADHAGFMLRDCAGHAFTLLHFNRARTAAEEVLERGRMLLEENGVGKDRIETLVMESSDHVESILNVADRGHYAVVAAG RNKRQPDSFFNRLFTRSVTMRLRDNTQRFALWVSQ
Sequences:
>Translated_275_residues MDKHLLVAVSEHRESSAGVRFACSLFNGSAGVRMTLLHVLGTAGQDAAAAAAMQRRAADMLHGVRQWAEGQGVLPADIET LVLPRRYGVLRDIVDTARKGLYDAVVVGGRYLSRLEQMYEDSVSRGLLWESVDFPVWICHQPDASRRNVLLCLDGEEPSY RIADHAGFMLRDCAGHAFTLLHFNRARTAAEEVLERGRMLLEENGVGKDRIETLVMESSDHVESILNVADRGHYAVVAAG RNKRQPDSFFNRLFTRSVTMRLRDNTQRFALWVSQ >Mature_275_residues MDKHLLVAVSEHRESSAGVRFACSLFNGSAGVRMTLLHVLGTAGQDAAAAAAMQRRAADMLHGVRQWAEGQGVLPADIET LVLPRRYGVLRDIVDTARKGLYDAVVVGGRYLSRLEQMYEDSVSRGLLWESVDFPVWICHQPDASRRNVLLCLDGEEPSY RIADHAGFMLRDCAGHAFTLLHFNRARTAAEEVLERGRMLLEENGVGKDRIETLVMESSDHVESILNVADRGHYAVVAAG RNKRQPDSFFNRLFTRSVTMRLRDNTQRFALWVSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30765; Mature: 30765
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKHLLVAVSEHRESSAGVRFACSLFNGSAGVRMTLLHVLGTAGQDAAAAAAMQRRAADM CCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LHGVRQWAEGQGVLPADIETLVLPRRYGVLRDIVDTARKGLYDAVVVGGRYLSRLEQMYE HHHHHHHHCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH DSVSRGLLWESVDFPVWICHQPDASRRNVLLCLDGEEPSYRIADHAGFMLRDCAGHAFTL HHHHCCCEEECCCCCEEEEECCCCCCCCEEEEECCCCCCEEEHHHCCHHHHHHCCCEEEE LHFNRARTAAEEVLERGRMLLEENGVGKDRIETLVMESSDHVESILNVADRGHYAVVAAG EEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECC RNKRQPDSFFNRLFTRSVTMRLRDNTQRFALWVSQ CCCCCHHHHHHHHHHHHHHEEECCCCEEEEEEECC >Mature Secondary Structure MDKHLLVAVSEHRESSAGVRFACSLFNGSAGVRMTLLHVLGTAGQDAAAAAAMQRRAADM CCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LHGVRQWAEGQGVLPADIETLVLPRRYGVLRDIVDTARKGLYDAVVVGGRYLSRLEQMYE HHHHHHHHCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH DSVSRGLLWESVDFPVWICHQPDASRRNVLLCLDGEEPSYRIADHAGFMLRDCAGHAFTL HHHHCCCEEECCCCCEEEEECCCCCCCCEEEEECCCCCCEEEHHHCCHHHHHHCCCEEEE LHFNRARTAAEEVLERGRMLLEENGVGKDRIETLVMESSDHVESILNVADRGHYAVVAAG EEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECC RNKRQPDSFFNRLFTRSVTMRLRDNTQRFALWVSQ CCCCCHHHHHHHHHHHHHHEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA