Click here to switch to the map view.

The map label for this gene is 78357842

Identifier: 78357842

GI number: 78357842

Start: 2791181

End: 2792122

Strand: Reverse

Name: 78357842

Synonym: Dde_2800

Alternate gene names: NA

Gene position: 2792122-2791181 (Counterclockwise)

Preceding gene: 78357849

Following gene: 78357839

Centisome position: 74.85

GC content: 39.17

Gene sequence:

>942_bases
ATGTCATCATATCTTTTTATCTTTTCAAATTTTGAATTAGAAATGGACGAACTCACTTTTGCAAAAATATTTGAATGTCA
AGTCCACAGGTACAAGAAGTCTGGGAAATTAGTAGCTCTCACCCCAAATGGTTGGGCAGTCGATCTCAGGAAAGACCTGT
TATTTACCGGAACTCCACCACATCGAATTAGCGTGAGCACAGAATTGGTGTCTCTAGATTGGGCAGTTGAAATAGAATTC
AGTGACGCGCTAATCACTGGCCCAGAGTGTAGATATGTCCGTTGCTACAAACTGCCTCGGGAAAACGCATTTCCAATTGA
TGACTGTGGGAAACCGCTTGAGCAAAGAATTAATATTTCACCAAGCACCCATTTCACCGATGACGAAAGCAAGTACATCG
GTGAATACAAACATACTGGGCGGATTTACTCTTTTATTTGCTCTTTGATTAGCCGCATATTCAGAACAAAAAATGCAGCT
CTTGAAAATGAAAAACATAACTTAAAAGTTGAAGAGCGATTTGAAGAAGTGCAAGAAGCTAAAAGAAGAGTGCGGAATAG
GAATGAAGAAGAGATTGCTGAATTACTATCATCATTTTCCAACTGGGAAATACTTACTGGAGAACAATTTGAATGGGCAG
TCGGCAGGCTATATGAGAAACAAGGCTATTCTGTCGATTACACAAAAACTTCAAATGATGGTGGTGTTGATATTGTTTTA
TCTAATAATGAAGAGAAAATTATCATTCAATGCAAGTGCTATAGCAAAAATGTGGGGGTGGCAGCCGTGCGTGAGCTTGT
TGGTATAGCCAATCAGTGGCCTGAAGCTACTAAATTCATGCTGGTCGCTTTGAATGGATTTACTCGACCTGCAACAGAAT
TCGCAAAAAATAATAATGTTGACCTATTTTCCATTAGGAACGACCATTTTCAATTGCCTTAG

Upstream 100 bases:

>100_bases
TTCATAACGTTGTAAACCCGCTCAGATTTTTGCACCAAAATTGACCGTCATCAGTTGAAATGAAAGCATCTTTTTTTTAT
TTAATTGCAACTGCTTTTGG

Downstream 100 bases:

>100_bases
AAATTAAGAAGTTAAGCTATATAATACTGGCTGCGAACCTTGTACGGAGCACCGCTGTGACGGCGGTACAGGTAGCCAGC
GTTCATGAGGTCTTCCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type II Restriction Endonuclease Family Protein; Restriction Endonuclease Family Protein; Endonuclease

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSSYLFIFSNFELEMDELTFAKIFECQVHRYKKSGKLVALTPNGWAVDLRKDLLFTGTPPHRISVSTELVSLDWAVEIEF
SDALITGPECRYVRCYKLPRENAFPIDDCGKPLEQRINISPSTHFTDDESKYIGEYKHTGRIYSFICSLISRIFRTKNAA
LENEKHNLKVEERFEEVQEAKRRVRNRNEEEIAELLSSFSNWEILTGEQFEWAVGRLYEKQGYSVDYTKTSNDGGVDIVL
SNNEEKIIIQCKCYSKNVGVAAVRELVGIANQWPEATKFMLVALNGFTRPATEFAKNNNVDLFSIRNDHFQLP

Sequences:

>Translated_313_residues
MSSYLFIFSNFELEMDELTFAKIFECQVHRYKKSGKLVALTPNGWAVDLRKDLLFTGTPPHRISVSTELVSLDWAVEIEF
SDALITGPECRYVRCYKLPRENAFPIDDCGKPLEQRINISPSTHFTDDESKYIGEYKHTGRIYSFICSLISRIFRTKNAA
LENEKHNLKVEERFEEVQEAKRRVRNRNEEEIAELLSSFSNWEILTGEQFEWAVGRLYEKQGYSVDYTKTSNDGGVDIVL
SNNEEKIIIQCKCYSKNVGVAAVRELVGIANQWPEATKFMLVALNGFTRPATEFAKNNNVDLFSIRNDHFQLP
>Mature_312_residues
SSYLFIFSNFELEMDELTFAKIFECQVHRYKKSGKLVALTPNGWAVDLRKDLLFTGTPPHRISVSTELVSLDWAVEIEFS
DALITGPECRYVRCYKLPRENAFPIDDCGKPLEQRINISPSTHFTDDESKYIGEYKHTGRIYSFICSLISRIFRTKNAAL
ENEKHNLKVEERFEEVQEAKRRVRNRNEEEIAELLSSFSNWEILTGEQFEWAVGRLYEKQGYSVDYTKTSNDGGVDIVLS
NNEEKIIIQCKCYSKNVGVAAVRELVGIANQWPEATKFMLVALNGFTRPATEFAKNNNVDLFSIRNDHFQLP

Specific function: Unknown

COG id: COG1787

COG function: function code V; Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36098; Mature: 35967

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYLFIFSNFELEMDELTFAKIFECQVHRYKKSGKLVALTPNGWAVDLRKDLLFTGTPP
CCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCEEEECCCC
HRISVSTELVSLDWAVEIEFSDALITGPECRYVRCYKLPRENAFPIDDCGKPLEQRINIS
CEEEEEEEEEEEEEEEEEEECCEEEECCCCCEEEEEECCCCCCCCHHHCCCCHHHHCCCC
PSTHFTDDESKYIGEYKHTGRIYSFICSLISRIFRTKNAALENEKHNLKVEERFEEVQEA
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KRRVRNRNEEEIAELLSSFSNWEILTGEQFEWAVGRLYEKQGYSVDYTKTSNDGGVDIVL
HHHHHCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEE
SNNEEKIIIQCKCYSKNVGVAAVRELVGIANQWPEATKFMLVALNGFTRPATEFAKNNNV
ECCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCHHHHHCCCCE
DLFSIRNDHFQLP
EEEEECCCCCCCC
>Mature Secondary Structure 
SSYLFIFSNFELEMDELTFAKIFECQVHRYKKSGKLVALTPNGWAVDLRKDLLFTGTPP
CCEEEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCEEEECCCC
HRISVSTELVSLDWAVEIEFSDALITGPECRYVRCYKLPRENAFPIDDCGKPLEQRINIS
CEEEEEEEEEEEEEEEEEEECCEEEECCCCCEEEEEECCCCCCCCHHHCCCCHHHHCCCC
PSTHFTDDESKYIGEYKHTGRIYSFICSLISRIFRTKNAALENEKHNLKVEERFEEVQEA
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KRRVRNRNEEEIAELLSSFSNWEILTGEQFEWAVGRLYEKQGYSVDYTKTSNDGGVDIVL
HHHHHCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEE
SNNEEKIIIQCKCYSKNVGVAAVRELVGIANQWPEATKFMLVALNGFTRPATEFAKNNNV
ECCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCHHHHHCCCCE
DLFSIRNDHFQLP
EEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA