| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yraQ [C]
Identifier: 78357819
GI number: 78357819
Start: 2779428
End: 2780519
Strand: Direct
Name: yraQ [C]
Synonym: Dde_2777
Alternate gene names: 78357819
Gene position: 2779428-2780519 (Clockwise)
Preceding gene: 78357818
Following gene: 78357820
Centisome position: 74.51
GC content: 48.35
Gene sequence:
>1092_bases ATGAATAACAAAGTAACAGATACAACATGTGAATCTTCACATGGAGTTAGAAAACAAATGATTAAGAAAAATTTCAGGAC TTCTCAAACAATTATACTGGGTCTTGTTATTGTCACCACTTGGTACGCAATTTATAGCCAACTCCTGCCTTTCTCAGAGT GGTTCAGCTATTCACTTCTGGGGCTGTCTGCTGACAGCCATCTTGGTTCTGCTGTACAATTTTTTGTATATGATACCCCG AAAGTCCTTATGCTTCTCCTGCTCGTGGTGTTTTTTGTAGGCATTCTCCGCTCATTTGTAACAGTCGAGTGGACTAGACG TATTCTGGCCGGAAAAAAAGAATCAGTGGGAAACGTACTGGCCGCCTTGCTGGGCGTGGTCACCCCGTTTTGCTCCTGCT CTGCGGTGCCGCTGTTCATAGGATTCATGACAGCTGGAGTTCCTCTCGGCGTGACATTTTCCTTTCTTATCTCAGCCCCC ATGGTGAACGAGATTGCCCTTGTTTTACTGTATGGCTTGTTGGGTTGGAAAATCGCAGCGCTGTATTTTGTAACAGGAAT CAGTGTCGCTATTGTCGCGGGATGGACCATGGGGCGCTTGAAATTGGAAAATCATGTCGAAGATTGGGTCATGAAAATCC GCGCTGGAGAAAGTGGGCTGAGCGACCAGAATATGTCCTGGCGGCAGCGGCTCGAATATGCGCTCGATTCCGTCAAGGAT ATCGTTGGGCGTGTCTGGAAGTATGTTGTGATCGGCATTGCCGTTGGCGCAGGAATTCACGGGTATGTGCCTGAAGGCTA TCTGGCTGGCATCATGGGCGACTCCTCCTGGTGGTCGGTACCCCTTTCCGTAGTGATAGGCATTCCCATGTACACCAACG CTGCGGGAATCATTCCTGTTGTTGAAGCGTTGCTCGGCAAAGGTGCGGCACTTGGCACGGTCTTGGCCTTCATGATGAGT GTCATCGCTTTGTCCTTCCCGGAAATGGTTATTCTTCGAAAGGTGCTCAAGCCTCGCTTGATCACAATATTCATCGGCGT TGTCGGATGCGGCATTTTGTGTGTCGGTTATATTTTCAATGCAGTCATCTAA
Upstream 100 bases:
>100_bases TGTAATGAATTTCTTTAATTGCATGGGATCGATTCTAGCCCAAGACCTGAAATAATTTTTTTAACGAACATTTGGCGAAT CAGCCAAACAAGAGGGTTAC
Downstream 100 bases:
>100_bases CCAAAAGGAAAACATCAATGAAGATTCAGGTGATGGGGCCAGGCTGTCCCAAGTGCGCGGAAGCGGAAAAGAACGTCAAG GAAGCGGTGGCCGAAGCAGG
Product: permease-like protein
Products: NA
Alternate protein names: Permease Family Protein; Permease Superfamily; Permease-Like Protein; Integral Membrane Protein
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MNNKVTDTTCESSHGVRKQMIKKNFRTSQTIILGLVIVTTWYAIYSQLLPFSEWFSYSLLGLSADSHLGSAVQFFVYDTP KVLMLLLLVVFFVGILRSFVTVEWTRRILAGKKESVGNVLAALLGVVTPFCSCSAVPLFIGFMTAGVPLGVTFSFLISAP MVNEIALVLLYGLLGWKIAALYFVTGISVAIVAGWTMGRLKLENHVEDWVMKIRAGESGLSDQNMSWRQRLEYALDSVKD IVGRVWKYVVIGIAVGAGIHGYVPEGYLAGIMGDSSWWSVPLSVVIGIPMYTNAAGIIPVVEALLGKGAALGTVLAFMMS VIALSFPEMVILRKVLKPRLITIFIGVVGCGILCVGYIFNAVI
Sequences:
>Translated_363_residues MNNKVTDTTCESSHGVRKQMIKKNFRTSQTIILGLVIVTTWYAIYSQLLPFSEWFSYSLLGLSADSHLGSAVQFFVYDTP KVLMLLLLVVFFVGILRSFVTVEWTRRILAGKKESVGNVLAALLGVVTPFCSCSAVPLFIGFMTAGVPLGVTFSFLISAP MVNEIALVLLYGLLGWKIAALYFVTGISVAIVAGWTMGRLKLENHVEDWVMKIRAGESGLSDQNMSWRQRLEYALDSVKD IVGRVWKYVVIGIAVGAGIHGYVPEGYLAGIMGDSSWWSVPLSVVIGIPMYTNAAGIIPVVEALLGKGAALGTVLAFMMS VIALSFPEMVILRKVLKPRLITIFIGVVGCGILCVGYIFNAVI >Mature_363_residues MNNKVTDTTCESSHGVRKQMIKKNFRTSQTIILGLVIVTTWYAIYSQLLPFSEWFSYSLLGLSADSHLGSAVQFFVYDTP KVLMLLLLVVFFVGILRSFVTVEWTRRILAGKKESVGNVLAALLGVVTPFCSCSAVPLFIGFMTAGVPLGVTFSFLISAP MVNEIALVLLYGLLGWKIAALYFVTGISVAIVAGWTMGRLKLENHVEDWVMKIRAGESGLSDQNMSWRQRLEYALDSVKD IVGRVWKYVVIGIAVGAGIHGYVPEGYLAGIMGDSSWWSVPLSVVIGIPMYTNAAGIIPVVEALLGKGAALGTVLAFMMS VIALSFPEMVILRKVLKPRLITIFIGVVGCGILCVGYIFNAVI
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39507; Mature: 39507
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKVTDTTCESSHGVRKQMIKKNFRTSQTIILGLVIVTTWYAIYSQLLPFSEWFSYSLL CCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GLSADSHLGSAVQFFVYDTPKVLMLLLLVVFFVGILRSFVTVEWTRRILAGKKESVGNVL CCCCCCHHCHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AALLGVVTPFCSCSAVPLFIGFMTAGVPLGVTFSFLISAPMVNEIALVLLYGLLGWKIAA HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LYFVTGISVAIVAGWTMGRLKLENHVEDWVMKIRAGESGLSDQNMSWRQRLEYALDSVKD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH IVGRVWKYVVIGIAVGAGIHGYVPEGYLAGIMGDSSWWSVPLSVVIGIPMYTNAAGIIPV HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCHHHH VEALLGKGAALGTVLAFMMSVIALSFPEMVILRKVLKPRLITIFIGVVGCGILCVGYIFN HHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVI HCC >Mature Secondary Structure MNNKVTDTTCESSHGVRKQMIKKNFRTSQTIILGLVIVTTWYAIYSQLLPFSEWFSYSLL CCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GLSADSHLGSAVQFFVYDTPKVLMLLLLVVFFVGILRSFVTVEWTRRILAGKKESVGNVL CCCCCCHHCHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AALLGVVTPFCSCSAVPLFIGFMTAGVPLGVTFSFLISAPMVNEIALVLLYGLLGWKIAA HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LYFVTGISVAIVAGWTMGRLKLENHVEDWVMKIRAGESGLSDQNMSWRQRLEYALDSVKD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH IVGRVWKYVVIGIAVGAGIHGYVPEGYLAGIMGDSSWWSVPLSVVIGIPMYTNAAGIIPV HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCHHHH VEALLGKGAALGTVLAFMMSVIALSFPEMVILRKVLKPRLITIFIGVVGCGILCVGYIFN HHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVI HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA