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The map label for this gene is yicC [C]

Identifier: 78357763

GI number: 78357763

Start: 2722067

End: 2722948

Strand: Reverse

Name: yicC [C]

Synonym: Dde_2721

Alternate gene names: 78357763

Gene position: 2722948-2722067 (Counterclockwise)

Preceding gene: 78357764

Following gene: 78357762

Centisome position: 73.0

GC content: 58.62

Gene sequence:

>882_bases
ATGCTTCGTAGTATGACCGGCTTCGGCCGTTGCACCAAGGAAAGCCCCGACTGGACCCAGACATGGGAGATCCGCAGCGT
GAACAGCCGCCATCTGGATATCAAATGGCGTCTGCCCGGTTTTCTGCGCGGGTATGAATCCCGGCTGGAAAAGGTGCTGC
GCCGGTTCGGCTCGCGCGGTAGGGTGGACGTCTCGCTTTCGCTGGATATCCGGCGGCAGGGACTGGATGGTGTCAGCTTC
AACACGCGTCAGGCCGCATCCATGCTGGAGCAGCTGACCGGTTTTGCCGCAGAGCGCGGCGATGCCTTTGTACCCGACTA
TAACCGGCTGCTTAATCTTTCCTACCTGTGGGAAGATGCTTCCGGCGAACTGGACGAAACACTGCTGGGCAGTCTGGAAG
AAGGGCTGGCCGCGGCTCTGGCCGACTGGAACAAGGCACGCGAGACCGAGGCTCAGGCTCTGCTGGCCGATCTGGAAACC
CGCATAGGCCGTATGCGCGGCTGGGCGGAAATCATTGCGGCCAAGGCGCCTGCCATCAAGGATGAAAAATTCACAACGCT
GCGCGAGCGCATTGCCGAAATTCTTGAACGTGAAGGGCTGGAGCTGGAACCGAACCGTTTTCTGCAGGAAATCACCATCA
TGTCCGACAAGCTGGACATAAGTGAAGAAATCACCCGCATGGACGCGCACCTGACACGGCTGGGCGAGCTGCTGCATCAG
GGCACCGATGCCGGCAAGCGGCTTGATTTCACCCTGCAGGAGTGCTTCCGCGAAATCAACACCTGCGGTAACAAGGTGCA
GGATCCTTCGGTCTCGCGCGTTGTGGTTGATTTTAAGAATGAGCTGGAAAAATGCCGTGAGCAGGTGCAGAACATCGAGT
AA

Upstream 100 bases:

>100_bases
TGTTTTTTTGTTTTCCGGGCGGTGATGCTTTCCGGCATGCCGCTTTTGCACCGTTATCATCCGCCCTGCACAGCAGGGCG
GTTCTGCATGGAGTACCATA

Downstream 100 bases:

>100_bases
TCATGCAGAAACAAAGACTTCTTAATGTCGGGTTCGGCAACTTTGTGGTTGCCGAACGCGTGGTTTCCATAGTGAATCCC
GCATCGGCTCCCATGCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MLRSMTGFGRCTKESPDWTQTWEIRSVNSRHLDIKWRLPGFLRGYESRLEKVLRRFGSRGRVDVSLSLDIRRQGLDGVSF
NTRQAASMLEQLTGFAAERGDAFVPDYNRLLNLSYLWEDASGELDETLLGSLEEGLAAALADWNKARETEAQALLADLET
RIGRMRGWAEIIAAKAPAIKDEKFTTLRERIAEILEREGLELEPNRFLQEITIMSDKLDISEEITRMDAHLTRLGELLHQ
GTDAGKRLDFTLQECFREINTCGNKVQDPSVSRVVVDFKNELEKCREQVQNIE

Sequences:

>Translated_293_residues
MLRSMTGFGRCTKESPDWTQTWEIRSVNSRHLDIKWRLPGFLRGYESRLEKVLRRFGSRGRVDVSLSLDIRRQGLDGVSF
NTRQAASMLEQLTGFAAERGDAFVPDYNRLLNLSYLWEDASGELDETLLGSLEEGLAAALADWNKARETEAQALLADLET
RIGRMRGWAEIIAAKAPAIKDEKFTTLRERIAEILEREGLELEPNRFLQEITIMSDKLDISEEITRMDAHLTRLGELLHQ
GTDAGKRLDFTLQECFREINTCGNKVQDPSVSRVVVDFKNELEKCREQVQNIE
>Mature_293_residues
MLRSMTGFGRCTKESPDWTQTWEIRSVNSRHLDIKWRLPGFLRGYESRLEKVLRRFGSRGRVDVSLSLDIRRQGLDGVSF
NTRQAASMLEQLTGFAAERGDAFVPDYNRLLNLSYLWEDASGELDETLLGSLEEGLAAALADWNKARETEAQALLADLET
RIGRMRGWAEIIAAKAPAIKDEKFTTLRERIAEILEREGLELEPNRFLQEITIMSDKLDISEEITRMDAHLTRLGELLHQ
GTDAGKRLDFTLQECFREINTCGNKVQDPSVSRVVVDFKNELEKCREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=296, Percent_Identity=30.7432432432432, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33508; Mature: 33508

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSMTGFGRCTKESPDWTQTWEIRSVNSRHLDIKWRLPGFLRGYESRLEKVLRRFGSRG
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCC
RVDVSLSLDIRRQGLDGVSFNTRQAASMLEQLTGFAAERGDAFVPDYNRLLNLSYLWEDA
CEEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEHHHEECCC
SGELDETLLGSLEEGLAAALADWNKARETEAQALLADLETRIGRMRGWAEIIAAKAPAIK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DEKFTTLRERIAEILEREGLELEPNRFLQEITIMSDKLDISEEITRMDAHLTRLGELLHQ
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GTDAGKRLDFTLQECFREINTCGNKVQDPSVSRVVVDFKNELEKCREQVQNIE
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRSMTGFGRCTKESPDWTQTWEIRSVNSRHLDIKWRLPGFLRGYESRLEKVLRRFGSRG
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCC
RVDVSLSLDIRRQGLDGVSFNTRQAASMLEQLTGFAAERGDAFVPDYNRLLNLSYLWEDA
CEEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEHHHEECCC
SGELDETLLGSLEEGLAAALADWNKARETEAQALLADLETRIGRMRGWAEIIAAKAPAIK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DEKFTTLRERIAEILEREGLELEPNRFLQEITIMSDKLDISEEITRMDAHLTRLGELLHQ
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GTDAGKRLDFTLQECFREINTCGNKVQDPSVSRVVVDFKNELEKCREQVQNIE
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]