| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357724
Identifier: 78357724
GI number: 78357724
Start: 2691829
End: 2692137
Strand: Reverse
Name: 78357724
Synonym: Dde_2682
Alternate gene names: NA
Gene position: 2692137-2691829 (Counterclockwise)
Preceding gene: 78357725
Following gene: 78357723
Centisome position: 72.17
GC content: 57.28
Gene sequence:
>309_bases ATGTCACTTAGCAAACAGTTTCTGAAAACAAAGCCCCGTTGCAGGGTGCGCTTCCGTCTGCCCGCCGAAGCGGTTTCCGG CGTGCAGCATGTTACCGTGGTGGGTGACTTTAACGGCTGGGATGAAACTTCCACCCCCATGAAGCGTCTCAAGGACGGTT CTTTTACGGTTGAGGTGGGGCTGGAAACCGGGCGGCAGTATCAGTTCCGCTATCTGGCCGACGGTTCCCGGTGGCTTAAT GACGATGCTGCGGACGCCTATGTCTGGTGCGAGTTTGCCCGCGCAGAGAATTCCGTGGTGGAACTGTAG
Upstream 100 bases:
>100_bases GTGTGTTTGGGCTGATAGTGGGATACGAAAAAAATCATTATTCGGAAACGGACAGGCGTGATACCGGTAAACCCTGGTCC ATGCAATTCTGGAGGTCGGC
Downstream 100 bases:
>100_bases CACCCGCACTGCCTGCTTCTGCCCCGGCGCGCAGCGGCACACATCCGGCCCCCATGCGGGGCCTTTTATTTTTTACGGTA TCCGGCTGAAAAAGCTTGAA
Product: isoamylase protein-like
Products: NA
Alternate protein names: Isoamylase N-Terminal Domain-Containing Protein; Glycoside Hydrolase Family Protein; Isoamylase Protein-Like Protein; Isoamylase Protein; Isoamylase N-Terminal Domain Protein; Isoamylase-Like Protein; Isoamylase Protein-Like
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSLSKQFLKTKPRCRVRFRLPAEAVSGVQHVTVVGDFNGWDETSTPMKRLKDGSFTVEVGLETGRQYQFRYLADGSRWLN DDAADAYVWCEFARAENSVVEL
Sequences:
>Translated_102_residues MSLSKQFLKTKPRCRVRFRLPAEAVSGVQHVTVVGDFNGWDETSTPMKRLKDGSFTVEVGLETGRQYQFRYLADGSRWLN DDAADAYVWCEFARAENSVVEL >Mature_101_residues SLSKQFLKTKPRCRVRFRLPAEAVSGVQHVTVVGDFNGWDETSTPMKRLKDGSFTVEVGLETGRQYQFRYLADGSRWLND DAADAYVWCEFARAENSVVEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11637; Mature: 11506
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSKQFLKTKPRCRVRFRLPAEAVSGVQHVTVVGDFNGWDETSTPMKRLKDGSFTVEVG CCCCCHHHCCCCCEEEEEECCHHHHCCCEEEEEEECCCCCCCCCCHHHHHCCCCEEEEEE LETGRQYQFRYLADGSRWLNDDAADAYVWCEFARAENSVVEL CCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEECC >Mature Secondary Structure SLSKQFLKTKPRCRVRFRLPAEAVSGVQHVTVVGDFNGWDETSTPMKRLKDGSFTVEVG CCCCHHHCCCCCEEEEEECCHHHHCCCEEEEEEECCCCCCCCCCHHHHHCCCCEEEEEE LETGRQYQFRYLADGSRWLNDDAADAYVWCEFARAENSVVEL CCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA