| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is ppnK
Identifier: 78357660
GI number: 78357660
Start: 2633999
End: 2634877
Strand: Reverse
Name: ppnK
Synonym: Dde_2618
Alternate gene names: 78357660
Gene position: 2634877-2633999 (Counterclockwise)
Preceding gene: 78357664
Following gene: 78357659
Centisome position: 70.64
GC content: 61.21
Gene sequence:
>879_bases ATGCATCGCGAATTGAAAAGAGTTTTTATAGTCACCAAGCAGGCCCATGCCGGAGCCGCTGCCCTTGCCGCCGATATGCA GGCATGGTTTGCCGCGCGCGGCATAGAAGCGGCAACGGAAGAAAACGATACCGCATCGGCTCTTCCTGACTTTGCGCGCA GTGCTTCGTGCATCATGGTGCTGGGCGGCGACGGCACCATGCTGAGTGTTTCGCGCAGAGCAGTGGGGCTTGATGTGCCG TTGCTCGGCGTCAATCTGGGCAAGGTGGGCTTTCTGGCAGAGGTTTCAGCCGCAGGCTGGCAGCAGGCTTTTACCCGGCT GGCGGAAAACGGCCTGACGTGTTCGGAGCGGCTGGCGCTGCATTTTGCCGTGAGCCGGGAAGGACGCTGCGTTTTTGAGG GCACGGCCGTCAACGATGTTGTGCTGCACCGCGGCGTACTGGCCCGGGTGATCAATCTGGGGCTGGGCGTGGACGGCGAA TGGCTGGGCGATCTGCGTGCGGACGGGCTTATCGTGTCCACCCCCACCGGAGCCACCGGGTATGCCGTATCGGCGGGGGG ACCGCTGGTGCATCCCGATATGTCTGTCTATGCCATCACACCTATCTGTCCGTTTCTCAACAATTTTCATCCCATGGTGC TGGCCGGTTCCATGCGGTTCGAGATCAGGATTCTGGAAGGGCCGCAGGAAGTGTATGTGACGCAGGACGGTCAGGAATGC TTTGCCCTGCAGGCGGGTGATCTTGTCACCGTCACGCAGGCTTCCCGCGGGTTGCTTTTTGTCGCTGTTGAAGGCTCCAC CTATTTCACGCGGCTGCGTGCCAAAGGCTTTGTACGCGACCCGAGAGGACGCGGGCGGGCCGTTCCCGCATCAAGCTGA
Upstream 100 bases:
>100_bases GCGGGCTTTTATTCTTGTCCGGCGGGCGCATGTGGGGTAGTCCCTGCCGCAAAGCCTTACGGCTTCTTGATGGAATCTGT GCTTTCTACTAGGGATAGTC
Downstream 100 bases:
>100_bases TGCGCGGCCGTTTTTCCGGAGGTTAGAATGACTGCGCTTCCCGAACTTGCTTCCGTGCGCGAAGTGCGCCAGGGGGTTGA TCCTGTGCTGGATGCATGGC
Product: NAD(+) kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MHRELKRVFIVTKQAHAGAAALAADMQAWFAARGIEAATEENDTASALPDFARSASCIMVLGGDGTMLSVSRRAVGLDVP LLGVNLGKVGFLAEVSAAGWQQAFTRLAENGLTCSERLALHFAVSREGRCVFEGTAVNDVVLHRGVLARVINLGLGVDGE WLGDLRADGLIVSTPTGATGYAVSAGGPLVHPDMSVYAITPICPFLNNFHPMVLAGSMRFEIRILEGPQEVYVTQDGQEC FALQAGDLVTVTQASRGLLFVAVEGSTYFTRLRAKGFVRDPRGRGRAVPASS
Sequences:
>Translated_292_residues MHRELKRVFIVTKQAHAGAAALAADMQAWFAARGIEAATEENDTASALPDFARSASCIMVLGGDGTMLSVSRRAVGLDVP LLGVNLGKVGFLAEVSAAGWQQAFTRLAENGLTCSERLALHFAVSREGRCVFEGTAVNDVVLHRGVLARVINLGLGVDGE WLGDLRADGLIVSTPTGATGYAVSAGGPLVHPDMSVYAITPICPFLNNFHPMVLAGSMRFEIRILEGPQEVYVTQDGQEC FALQAGDLVTVTQASRGLLFVAVEGSTYFTRLRAKGFVRDPRGRGRAVPASS >Mature_292_residues MHRELKRVFIVTKQAHAGAAALAADMQAWFAARGIEAATEENDTASALPDFARSASCIMVLGGDGTMLSVSRRAVGLDVP LLGVNLGKVGFLAEVSAAGWQQAFTRLAENGLTCSERLALHFAVSREGRCVFEGTAVNDVVLHRGVLARVINLGLGVDGE WLGDLRADGLIVSTPTGATGYAVSAGGPLVHPDMSVYAITPICPFLNNFHPMVLAGSMRFEIRILEGPQEVYVTQDGQEC FALQAGDLVTVTQASRGLLFVAVEGSTYFTRLRAKGFVRDPRGRGRAVPASS
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=283, Percent_Identity=28.2685512367491, Blast_Score=93, Evalue=3e-19, Organism=Escherichia coli, GI1788968, Length=284, Percent_Identity=27.8169014084507, Blast_Score=134, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6322509, Length=240, Percent_Identity=31.6666666666667, Blast_Score=110, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320794, Length=228, Percent_Identity=28.0701754385965, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6325068, Length=178, Percent_Identity=34.2696629213483, Blast_Score=103, Evalue=3e-23, Organism=Drosophila melanogaster, GI161077047, Length=224, Percent_Identity=31.6964285714286, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI28573828, Length=260, Percent_Identity=30, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI28573832, Length=260, Percent_Identity=30, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI28573830, Length=260, Percent_Identity=30, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI28573826, Length=260, Percent_Identity=30, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI281363321, Length=249, Percent_Identity=26.5060240963855, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24653422, Length=247, Percent_Identity=26.7206477732794, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI20129957, Length=285, Percent_Identity=25.6140350877193, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI281363323, Length=247, Percent_Identity=26.7206477732794, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24653424, Length=249, Percent_Identity=26.5060240963855, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_DESDG (Q30Y32)
Other databases:
- EMBL: CP000112 - RefSeq: YP_389109.1 - ProteinModelPortal: Q30Y32 - SMR: Q30Y32 - STRING: Q30Y32 - GeneID: 3757640 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_2618 - NMPDR: fig|207559.3.peg.2805 - eggNOG: COG0061 - HOGENOM: HBG713904 - OMA: LNEMVLH - ProtClustDB: CLSK705469 - BioCyc: DDES207559:DDE_2618-MONOMER - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 30945; Mature: 30945
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRELKRVFIVTKQAHAGAAALAADMQAWFAARGIEAATEENDTASALPDFARSASCIMV CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCHHHHCCCCEEEE LGGDGTMLSVSRRAVGLDVPLLGVNLGKVGFLAEVSAAGWQQAFTRLAENGLTCSERLAL ECCCCCEEEEECCEECCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHEEE HFAVSREGRCVFEGTAVNDVVLHRGVLARVINLGLGVDGEWLGDLRADGLIVSTPTGATG EEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEECCCCCCC YAVSAGGPLVHPDMSVYAITPICPFLNNFHPMVLAGSMRFEIRILEGPQEVYVTQDGQEC EEEECCCCEECCCCCEEEECCHHHHHCCCCCEEEECCEEEEEEEEECCCEEEEEECCCEE FALQAGDLVTVTQASRGLLFVAVEGSTYFTRLRAKGFVRDPRGRGRAVPASS EEEECCCEEEEEECCCCEEEEEECCCCEEEEEECCCCEECCCCCCCCCCCCC >Mature Secondary Structure MHRELKRVFIVTKQAHAGAAALAADMQAWFAARGIEAATEENDTASALPDFARSASCIMV CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCHHHHCCCCEEEE LGGDGTMLSVSRRAVGLDVPLLGVNLGKVGFLAEVSAAGWQQAFTRLAENGLTCSERLAL ECCCCCEEEEECCEECCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHEEE HFAVSREGRCVFEGTAVNDVVLHRGVLARVINLGLGVDGEWLGDLRADGLIVSTPTGATG EEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEECCCCCCC YAVSAGGPLVHPDMSVYAITPICPFLNNFHPMVLAGSMRFEIRILEGPQEVYVTQDGQEC EEEECCCCEECCCCCEEEECCHHHHHCCCCCEEEECCEEEEEEEEECCCEEEEEECCCEE FALQAGDLVTVTQASRGLLFVAVEGSTYFTRLRAKGFVRDPRGRGRAVPASS EEEECCCEEEEEECCCCEEEEEECCCCEEEEEECCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA