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The map label for this gene is ybhL [H]

Identifier: 78357643

GI number: 78357643

Start: 2620228

End: 2620929

Strand: Reverse

Name: ybhL [H]

Synonym: Dde_2601

Alternate gene names: 78357643

Gene position: 2620929-2620228 (Counterclockwise)

Preceding gene: 78357646

Following gene: 78357642

Centisome position: 70.26

GC content: 57.26

Gene sequence:

>702_bases
ATGTTGAGAACCGCCCAGCGCAGCCAGAGCCGTACTGAAGTCGTCAATGCCTTCATGCGCGGCGTGTACCAGTGGATGGC
GGCAGGACTGGCCGTAACAGCCGTATCCGCTTTTGCGGTGGCCAGCAGCCCCGCGCTGCTGCAGCTTATTTTCGGCACCC
CCATGCTGCCTCTTGTGCTTATGATCGGCCTTGTGGGGCTGGTGTTTTATATGTCGGCCCGCATCGGCACCATGTCTGCA
GGCACGGCAACCACGCTGTTTATGGTGTACAGCGCGCTGAACGGCGTTGTGCTCTCCAGCGTGCTCATTGTTTATGCCAC
AGCTTCGGTTTTTCAGGCTTTTGTCACCGCGGCGGCCATGTTCGGCGCCATGACGGTGTATGGCATGACCACCAAACGCG
ACCTTACATCCATGGGCAGCTTCATGTTCATGGGGCTTATCGGTATTCTTATCGCCTCGGTGGTTAATATCTTCCTCGGC
AGCTCCATGATGGAGCTGGTTATCAGCGCCATCGGCGTCATTGTGTTTACCGGGCTTACCGCGTACGATAGCCAGCAGCT
GCGCCAGATGGGTGAAACCGCTCCCATGGATGATCCGGTGGCCATACGCCGCGGAACCATTCTTGGCGCGTTGCGGTTGT
ACCTTGATTTTATCAACCTGTTCCTGATGCTTCTCAGGCTCTTCGGCGGAGCACGGGATTAA

Upstream 100 bases:

>100_bases
ACCCGGTTCCGCCGGATGCGTTGCACGCGCCTACTGCTTTTGCAGACAGGGCAGGCCCGTTAAAAATTTGTATTCAATTT
CCCAAGGAGGGATAATTACA

Downstream 100 bases:

>100_bases
CCGTCAAATGAGTACACGAAGGGAGCCGTGAGGCTCCCTTTTTTGTGGTGGCTGCATGTCTTCTCTGCCGTTGCAGAAAT
CTCTTTACCCCCTGCTGCGT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MLRTAQRSQSRTEVVNAFMRGVYQWMAAGLAVTAVSAFAVASSPALLQLIFGTPMLPLVLMIGLVGLVFYMSARIGTMSA
GTATTLFMVYSALNGVVLSSVLIVYATASVFQAFVTAAAMFGAMTVYGMTTKRDLTSMGSFMFMGLIGILIASVVNIFLG
SSMMELVISAIGVIVFTGLTAYDSQQLRQMGETAPMDDPVAIRRGTILGALRLYLDFINLFLMLLRLFGGARD

Sequences:

>Translated_233_residues
MLRTAQRSQSRTEVVNAFMRGVYQWMAAGLAVTAVSAFAVASSPALLQLIFGTPMLPLVLMIGLVGLVFYMSARIGTMSA
GTATTLFMVYSALNGVVLSSVLIVYATASVFQAFVTAAAMFGAMTVYGMTTKRDLTSMGSFMFMGLIGILIASVVNIFLG
SSMMELVISAIGVIVFTGLTAYDSQQLRQMGETAPMDDPVAIRRGTILGALRLYLDFINLFLMLLRLFGGARD
>Mature_233_residues
MLRTAQRSQSRTEVVNAFMRGVYQWMAAGLAVTAVSAFAVASSPALLQLIFGTPMLPLVLMIGLVGLVFYMSARIGTMSA
GTATTLFMVYSALNGVVLSSVLIVYATASVFQAFVTAAAMFGAMTVYGMTTKRDLTSMGSFMFMGLIGILIASVVNIFLG
SSMMELVISAIGVIVFTGLTAYDSQQLRQMGETAPMDDPVAIRRGTILGALRLYLDFINLFLMLLRLFGGARD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=210, Percent_Identity=28.0952380952381, Blast_Score=76, Evalue=2e-14,
Organism=Escherichia coli, GI1787004, Length=218, Percent_Identity=51.3761467889908, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1787205, Length=244, Percent_Identity=27.0491803278689, Blast_Score=62, Evalue=5e-11,
Organism=Drosophila melanogaster, GI45551091, Length=129, Percent_Identity=34.8837209302326, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI17647735, Length=129, Percent_Identity=34.8837209302326, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24653225, Length=129, Percent_Identity=34.8837209302326, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24653227, Length=129, Percent_Identity=34.8837209302326, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24653221, Length=129, Percent_Identity=34.8837209302326, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24653223, Length=129, Percent_Identity=34.8837209302326, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24929; Mature: 24929

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTAQRSQSRTEVVNAFMRGVYQWMAAGLAVTAVSAFAVASSPALLQLIFGTPMLPLVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
MIGLVGLVFYMSARIGTMSAGTATTLFMVYSALNGVVLSSVLIVYATASVFQAFVTAAAM
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGAMTVYGMTTKRDLTSMGSFMFMGLIGILIASVVNIFLGSSMMELVISAIGVIVFTGLT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH
AYDSQQLRQMGETAPMDDPVAIRRGTILGALRLYLDFINLFLMLLRLFGGARD
HCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLRTAQRSQSRTEVVNAFMRGVYQWMAAGLAVTAVSAFAVASSPALLQLIFGTPMLPLVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
MIGLVGLVFYMSARIGTMSAGTATTLFMVYSALNGVVLSSVLIVYATASVFQAFVTAAAM
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGAMTVYGMTTKRDLTSMGSFMFMGLIGILIASVVNIFLGSSMMELVISAIGVIVFTGLT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCH
AYDSQQLRQMGETAPMDDPVAIRRGTILGALRLYLDFINLFLMLLRLFGGARD
HCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]