| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78357614
Identifier: 78357614
GI number: 78357614
Start: 2589119
End: 2589583
Strand: Reverse
Name: 78357614
Synonym: Dde_2572
Alternate gene names: NA
Gene position: 2589583-2589119 (Counterclockwise)
Preceding gene: 78357616
Following gene: 78357612
Centisome position: 69.42
GC content: 58.28
Gene sequence:
>465_bases ATGTCAGTAATTCAGGACAATTTACACGCCATGGAGCAGGTGTTGCGGCATCTGCGGTCTGCAGAACACGATTCTGCCGA GGCCAGACTGTGCCAGTGGGCACTGGCGGAAATTTGCGAACAATCCGGCGCATACGCAGCAACGGTACTGGCAAAAACGC CTTTTGCCGCGCAGTTCGGCAGTGTGCTGGCAGAAGCGGCCGAAAGCGGAAACTGCTTTGCCCTGCTGGAAACGCTGACA TTGTTCTGTCGTGAACGGGTGTTGCGCAGGCCGGATATGCCGGAATCTTCCATGGAGGCGGCACTCTTTTCCTACTTCGT GCATTCGGGCGAATGGACTTTTGCCGACGGTACGCTGGTAACTGACTGGTTTTATGTGCGGCTGCCGGTGATGGTGCTGT TCGACCTGTGCACCACCGCCATGCACGGCAGCGGGGGCGGAGTCAGCGCGGCTGTGCACGGATAG
Upstream 100 bases:
>100_bases CAAAAAAATACGGCTGTGCCGTTGTGTATGTGTTTTCGTATTTTACAATACGTCTAAGCTATATTATGTGATTTATAACA ATCGCGCACAGGGGGAACAA
Downstream 100 bases:
>100_bases ACGCGTGCCCGCTTGCCTGCAGCGCGGCATGCCGCAGGCAGACTTTAAACAGCCTGCCGGGCGGTCAGCCCGCTTCGGGT ATACATGTGGCAGCCGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSVIQDNLHAMEQVLRHLRSAEHDSAEARLCQWALAEICEQSGAYAATVLAKTPFAAQFGSVLAEAAESGNCFALLETLT LFCRERVLRRPDMPESSMEAALFSYFVHSGEWTFADGTLVTDWFYVRLPVMVLFDLCTTAMHGSGGGVSAAVHG
Sequences:
>Translated_154_residues MSVIQDNLHAMEQVLRHLRSAEHDSAEARLCQWALAEICEQSGAYAATVLAKTPFAAQFGSVLAEAAESGNCFALLETLT LFCRERVLRRPDMPESSMEAALFSYFVHSGEWTFADGTLVTDWFYVRLPVMVLFDLCTTAMHGSGGGVSAAVHG >Mature_153_residues SVIQDNLHAMEQVLRHLRSAEHDSAEARLCQWALAEICEQSGAYAATVLAKTPFAAQFGSVLAEAAESGNCFALLETLTL FCRERVLRRPDMPESSMEAALFSYFVHSGEWTFADGTLVTDWFYVRLPVMVLFDLCTTAMHGSGGGVSAAVHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16820; Mature: 16689
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIQDNLHAMEQVLRHLRSAEHDSAEARLCQWALAEICEQSGAYAATVLAKTPFAAQFG CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCHHHHHH SVLAEAAESGNCFALLETLTLFCRERVLRRPDMPESSMEAALFSYFVHSGEWTFADGTLV HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHH TDWFYVRLPVMVLFDLCTTAMHGSGGGVSAAVHG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SVIQDNLHAMEQVLRHLRSAEHDSAEARLCQWALAEICEQSGAYAATVLAKTPFAAQFG CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCHHHHHH SVLAEAAESGNCFALLETLTLFCRERVLRRPDMPESSMEAALFSYFVHSGEWTFADGTLV HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHH TDWFYVRLPVMVLFDLCTTAMHGSGGGVSAAVHG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA