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The map label for this gene is rpfG [H]

Identifier: 78357605

GI number: 78357605

Start: 2581472

End: 2582740

Strand: Direct

Name: rpfG [H]

Synonym: Dde_2563

Alternate gene names: 78357605

Gene position: 2581472-2582740 (Clockwise)

Preceding gene: 78357604

Following gene: 78357606

Centisome position: 69.2

GC content: 56.11

Gene sequence:

>1269_bases
ATGGTCACGACAACACACAGCGAACTTATGGAAGTGCTGCTGGGAGCGCAGGACCTAATTGCGCCGGTGGTGGCCGGTCA
CGGCAGACGCGTGGCCATGTTTTCACGCATGATAGCCGAAGTCATGGACTATACGCCGCAACAGCTGCGCCACATCGACC
ATGCCGCAAAACTGCACGACATAGGCTGCTTTGCCCTGTCCATTCAGGAAAAAAACGACCTGCACCAGTTTGACGTGCTC
TCTCCGCAAAAGCACTGCGCTGTGGGATACCTGCTGCTGGGACGGAGCAGTCTTTTCGGCACGCTGGCCCCCGCCGTGCT
GCATCATCACACCCACTACGACCGCCGGACCGGCAACGGCAAAGACGGCCCCCCGGTACCGCACGAAGCGTTCATCATTC
ATCTGGCGGACAGAATCGATATTCTCACAGACGACCGGTTCAGCATTCTGCAGCAGCGCAAAGCCATAACCGAAGCCATA
ACAGACGGCAAAGGAACGCTGTTTCATCCTCATGTGGTCGAAGCCTTCTGCGAAGCGGCCTACAGAGAAAGCTTCTGGCT
GCGGGGGGTGCACGGAGACAGGCGAGGTATGGAAAAACAGGAAGACACCCGTACGCTGAGCCGTGAAGAGCTGCTGGACT
TTACGCGCATGCTCACGCTGGCCATCGACTACAAGTCACGCTTTACGGCAACCCACTCGCAGGGAGTGGCCGCCACCTGC
GCCGCCATGGGAACGATGGCAGGACTGCAGGATGATCTTACGCTCATTGTGGCAGGGCATCTGCACGATCTCGGCAAACT
GATAGTACCCAATGAAATACTTGAAAAAAAAGGGCCGCTCGATGAAACTGAGCGCGCCATCATGAACAGCCATCCCTTTT
ACACATACTCGCTGCTCAGCGAGGCTGCCGGCCTTGCCCGGATAGCCATGATTGCCGGAATGCATCAGGAAAAGCTCAAC
GGCAAGGGGTATCCGTTTCATCCCGAACCGGATGCTTTTCCCATGGCATCACGTGTGCTTGCAGTATGTGATGTCTTTAC
CGCGCTGGCAGAAAACAGACCCTACCGCAAGGGACTGCCCAAAAGTGACGTCATCAGCATAATGCGGCGCATGGTAAGCG
AAGGTCATCTGGACCCCCAGTGCTTTGCATATCTTACCGCGCATTATGAAACACTGGACGAACTGCGCAGAAACGCACAG
CAGCAGGCGGAAAAGGAATACCGAGGTTTCTGGAACAGAACGGAAGCGGTCATGGAAAGCATCGCATAA

Upstream 100 bases:

>100_bases
TGTTAATAATAGATTCTAATATTTCACCAAAGGTACTCCGATAAATATCCGCTAACAGACAGGAGCCATAATCACCTGCC
TTTACCCTCCGGGAGAACAT

Downstream 100 bases:

>100_bases
CCGCAGCGCCGGTCCGCACAAAAATAATATCGCCCCGTCGTGCGGCGCGGCTATGGTCATAATAAGGGAATCAGCCCTCG
GACGCACCGCGCCAACGGCA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MVTTTHSELMEVLLGAQDLIAPVVAGHGRRVAMFSRMIAEVMDYTPQQLRHIDHAAKLHDIGCFALSIQEKNDLHQFDVL
SPQKHCAVGYLLLGRSSLFGTLAPAVLHHHTHYDRRTGNGKDGPPVPHEAFIIHLADRIDILTDDRFSILQQRKAITEAI
TDGKGTLFHPHVVEAFCEAAYRESFWLRGVHGDRRGMEKQEDTRTLSREELLDFTRMLTLAIDYKSRFTATHSQGVAATC
AAMGTMAGLQDDLTLIVAGHLHDLGKLIVPNEILEKKGPLDETERAIMNSHPFYTYSLLSEAAGLARIAMIAGMHQEKLN
GKGYPFHPEPDAFPMASRVLAVCDVFTALAENRPYRKGLPKSDVISIMRRMVSEGHLDPQCFAYLTAHYETLDELRRNAQ
QQAEKEYRGFWNRTEAVMESIA

Sequences:

>Translated_422_residues
MVTTTHSELMEVLLGAQDLIAPVVAGHGRRVAMFSRMIAEVMDYTPQQLRHIDHAAKLHDIGCFALSIQEKNDLHQFDVL
SPQKHCAVGYLLLGRSSLFGTLAPAVLHHHTHYDRRTGNGKDGPPVPHEAFIIHLADRIDILTDDRFSILQQRKAITEAI
TDGKGTLFHPHVVEAFCEAAYRESFWLRGVHGDRRGMEKQEDTRTLSREELLDFTRMLTLAIDYKSRFTATHSQGVAATC
AAMGTMAGLQDDLTLIVAGHLHDLGKLIVPNEILEKKGPLDETERAIMNSHPFYTYSLLSEAAGLARIAMIAGMHQEKLN
GKGYPFHPEPDAFPMASRVLAVCDVFTALAENRPYRKGLPKSDVISIMRRMVSEGHLDPQCFAYLTAHYETLDELRRNAQ
QQAEKEYRGFWNRTEAVMESIA
>Mature_422_residues
MVTTTHSELMEVLLGAQDLIAPVVAGHGRRVAMFSRMIAEVMDYTPQQLRHIDHAAKLHDIGCFALSIQEKNDLHQFDVL
SPQKHCAVGYLLLGRSSLFGTLAPAVLHHHTHYDRRTGNGKDGPPVPHEAFIIHLADRIDILTDDRFSILQQRKAITEAI
TDGKGTLFHPHVVEAFCEAAYRESFWLRGVHGDRRGMEKQEDTRTLSREELLDFTRMLTLAIDYKSRFTATHSQGVAATC
AAMGTMAGLQDDLTLIVAGHLHDLGKLIVPNEILEKKGPLDETERAIMNSHPFYTYSLLSEAAGLARIAMIAGMHQEKLN
GKGYPFHPEPDAFPMASRVLAVCDVFTALAENRPYRKGLPKSDVISIMRRMVSEGHLDPQCFAYLTAHYETLDELRRNAQ
QQAEKEYRGFWNRTEAVMESIA

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 47346; Mature: 47346

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTTTHSELMEVLLGAQDLIAPVVAGHGRRVAMFSRMIAEVMDYTPQQLRHIDHAAKLHD
CCCCCHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IGCFALSIQEKNDLHQFDVLSPQKHCAVGYLLLGRSSLFGTLAPAVLHHHTHYDRRTGNG
CCEEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCC
KDGPPVPHEAFIIHLADRIDILTDDRFSILQQRKAITEAITDGKGTLFHPHVVEAFCEAA
CCCCCCCCHHEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHH
YRESFWLRGVHGDRRGMEKQEDTRTLSREELLDFTRMLTLAIDYKSRFTATHSQGVAATC
HHHHHHEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
AAMGTMAGLQDDLTLIVAGHLHDLGKLIVPNEILEKKGPLDETERAIMNSHPFYTYSLLS
HHHHHHHCCCCCCEEEEEHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCHHHHHHH
EAAGLARIAMIAGMHQEKLNGKGYPFHPEPDAFPMASRVLAVCDVFTALAENRPYRKGLP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCC
KSDVISIMRRMVSEGHLDPQCFAYLTAHYETLDELRRNAQQQAEKEYRGFWNRTEAVMES
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IA
CC
>Mature Secondary Structure
MVTTTHSELMEVLLGAQDLIAPVVAGHGRRVAMFSRMIAEVMDYTPQQLRHIDHAAKLHD
CCCCCHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IGCFALSIQEKNDLHQFDVLSPQKHCAVGYLLLGRSSLFGTLAPAVLHHHTHYDRRTGNG
CCEEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCC
KDGPPVPHEAFIIHLADRIDILTDDRFSILQQRKAITEAITDGKGTLFHPHVVEAFCEAA
CCCCCCCCHHEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHH
YRESFWLRGVHGDRRGMEKQEDTRTLSREELLDFTRMLTLAIDYKSRFTATHSQGVAATC
HHHHHHEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
AAMGTMAGLQDDLTLIVAGHLHDLGKLIVPNEILEKKGPLDETERAIMNSHPFYTYSLLS
HHHHHHHCCCCCCEEEEEHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCHHHHHHH
EAAGLARIAMIAGMHQEKLNGKGYPFHPEPDAFPMASRVLAVCDVFTALAENRPYRKGLP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCC
KSDVISIMRRMVSEGHLDPQCFAYLTAHYETLDELRRNAQQQAEKEYRGFWNRTEAVMES
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]