| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78357584
Identifier: 78357584
GI number: 78357584
Start: 2558589
End: 2560310
Strand: Reverse
Name: 78357584
Synonym: Dde_2542
Alternate gene names: NA
Gene position: 2560310-2558589 (Counterclockwise)
Preceding gene: 78357585
Following gene: 78357583
Centisome position: 68.64
GC content: 66.03
Gene sequence:
>1722_bases ATGGGCGGACTGACCGTGGATGCTTCCTTGACCCGTGCGGCACAAAGCATGGCGGACACCGGAACCTCAGACGCAGCGGA AAGTATGCGGCGTCCTGAGGATTCCGGCGCGGGCGAAACCGGCGGTGGCTTCCCGGACGCGGATACCACCCTGCAGGTAC TGCTTGCGGCGACGGACGCCGAGGCGGCCTTGCGTGCGGCCACGTCAGAGGAAGGCGATGCGCCGCGCGAGCATGCCCTC CACAGAGCCGTGGCTGCCGCCCGGTCCGCTGTGCCGTCAGCTGCCCGCGGTGCTCTGGATGAGATTCTGTATCCTTCAGC GGCGTTATTTACAGAGCAGAGGCACAGCGCACTGAATGAGCGCCGCCGTGTGCTGGCGGACGAGACCGTGCAGCGGCGTG TTGACGGGCTGCTGCAGGATATCAGCGTGCTGGCACGGGCAGAAGCGACGGAAGAACGTGACCTGCTGCTGGAAGAACGG GTAGGACAGGTGCGCCGGACAATGCTTGCGGGCGGTGCGCTGGCAGGTCTGGACCCTGATGACAGCCGGAACGCGGCTGC GCGGGCTGTTTCCGCCGCCTGTGCGCAGGCGGCCCGCCATATGGCCTTCGGCGGCGAGCTGCTGACCGGTGTTCCCGACC CTGCGGCACTCCGAAATGCGGAAAAATGGCTGGCGCGGCATACAGACGCGCTGGAACCGGATGATATGCAGCGGCTGCGG CATGAAATGGACTTTGCCGCGGATGTGACCAGAGCACACGAACTGGCCCGCGGATATGTGCAGCGCGGTGTGCCGCCGGA GCCCCTTGCACCGGACAGCAAGGCAACCCGGGCGGAGGATATGGCCCGCAGTATGGCAGGGGACATGCGGCGGGAACAGC AGCGCAGACAGCAGCAGGAACGCGAAGGGCAGGCGGAAGCTGTCTGGGAGCGTTTCTCCGGCGCGGCGGACGCCGCCGGA CGCGCAGCCGCCGTGTATGACGCGCCGGAGGAACTGCGGGATATGCTGTCTGCCGCAGCTGCCCGCAGGGCGGAGCACGG CAGACTGGAAACTGACTGGGATGCCTTTTACACCGCGCGTCTTGCCCTGACACCGCAGACGGATATCTGGGCTTTGCGCC ACAGGCTGTCGGACAGGGAATTCGGGATACTGCGGCAGGAACGTGAAGCCCTGACCCGCGGAGAGGAACCTGCGGCAAGA GGGCGGTTGCGTGCCGCCGTCAGTGCGGCCGGTCTGAACATGTCTGCCGCGGCGGCGCGTAGGGCTGAGCAGCTGCGCAT GGTTGAAGAGGCGTTGAATGCTCTGGATAATCCGTCCTATACTGATGCTGCGCGGCTGGGGCGTGAACTGTTGCGCCCCG CTGACAGAGCGCAGGCTGCCGGCGTATCTTCCGGAATGTTACCTGACACGGGTGGGGCGGTATCTGCAGATGGAGGGGCG GGCGCTCAACGGGGCAATGCAGCGTATGGCCCCGGCAGACGAATACCTGCTGACTCCACCGGCGAACCGACCGGCGGCAG GTATGACGCCTTGGCGGAAATGACGGAAGAGGCTGACGGCAGACTTCATATGGCTGCATCCGGAAAAGCAGGGCACACCG GCGGCGGGGCAACAGGAAATGTGCAGGACGCCGGATCTGTCCGCAAAACCGGTCGTCAGCGACGCAGTACGCGTGATCCG CTTGCGGGGGCGTTTTTCGGCACTCCTGCGGTGGGCGGCTGA
Upstream 100 bases:
>100_bases CAGGCTTACGGACAGTCTTTGCAGCGGCGTTCGCGCAGCGATGATTCGTTGTTCGGGCTGGCCCGCGGCATAGGTTCGCT GCTGGGCGGAGGGCGCTGAT
Downstream 100 bases:
>100_bases CGGCGGAAATCCTTTGTCCGGATATTTGCGGGGAGCATCTGCTCCCCGCTGTTTTTTTGCCGCTGCGGCGCGTGTGGTCC GGCTGAGTTTTCCGGCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MGGLTVDASLTRAAQSMADTGTSDAAESMRRPEDSGAGETGGGFPDADTTLQVLLAATDAEAALRAATSEEGDAPREHAL HRAVAAARSAVPSAARGALDEILYPSAALFTEQRHSALNERRRVLADETVQRRVDGLLQDISVLARAEATEERDLLLEER VGQVRRTMLAGGALAGLDPDDSRNAAARAVSAACAQAARHMAFGGELLTGVPDPAALRNAEKWLARHTDALEPDDMQRLR HEMDFAADVTRAHELARGYVQRGVPPEPLAPDSKATRAEDMARSMAGDMRREQQRRQQQEREGQAEAVWERFSGAADAAG RAAAVYDAPEELRDMLSAAAARRAEHGRLETDWDAFYTARLALTPQTDIWALRHRLSDREFGILRQEREALTRGEEPAAR GRLRAAVSAAGLNMSAAAARRAEQLRMVEEALNALDNPSYTDAARLGRELLRPADRAQAAGVSSGMLPDTGGAVSADGGA GAQRGNAAYGPGRRIPADSTGEPTGGRYDALAEMTEEADGRLHMAASGKAGHTGGGATGNVQDAGSVRKTGRQRRSTRDP LAGAFFGTPAVGG
Sequences:
>Translated_573_residues MGGLTVDASLTRAAQSMADTGTSDAAESMRRPEDSGAGETGGGFPDADTTLQVLLAATDAEAALRAATSEEGDAPREHAL HRAVAAARSAVPSAARGALDEILYPSAALFTEQRHSALNERRRVLADETVQRRVDGLLQDISVLARAEATEERDLLLEER VGQVRRTMLAGGALAGLDPDDSRNAAARAVSAACAQAARHMAFGGELLTGVPDPAALRNAEKWLARHTDALEPDDMQRLR HEMDFAADVTRAHELARGYVQRGVPPEPLAPDSKATRAEDMARSMAGDMRREQQRRQQQEREGQAEAVWERFSGAADAAG RAAAVYDAPEELRDMLSAAAARRAEHGRLETDWDAFYTARLALTPQTDIWALRHRLSDREFGILRQEREALTRGEEPAAR GRLRAAVSAAGLNMSAAAARRAEQLRMVEEALNALDNPSYTDAARLGRELLRPADRAQAAGVSSGMLPDTGGAVSADGGA GAQRGNAAYGPGRRIPADSTGEPTGGRYDALAEMTEEADGRLHMAASGKAGHTGGGATGNVQDAGSVRKTGRQRRSTRDP LAGAFFGTPAVGG >Mature_572_residues GGLTVDASLTRAAQSMADTGTSDAAESMRRPEDSGAGETGGGFPDADTTLQVLLAATDAEAALRAATSEEGDAPREHALH RAVAAARSAVPSAARGALDEILYPSAALFTEQRHSALNERRRVLADETVQRRVDGLLQDISVLARAEATEERDLLLEERV GQVRRTMLAGGALAGLDPDDSRNAAARAVSAACAQAARHMAFGGELLTGVPDPAALRNAEKWLARHTDALEPDDMQRLRH EMDFAADVTRAHELARGYVQRGVPPEPLAPDSKATRAEDMARSMAGDMRREQQRRQQQEREGQAEAVWERFSGAADAAGR AAAVYDAPEELRDMLSAAAARRAEHGRLETDWDAFYTARLALTPQTDIWALRHRLSDREFGILRQEREALTRGEEPAARG RLRAAVSAAGLNMSAAAARRAEQLRMVEEALNALDNPSYTDAARLGRELLRPADRAQAAGVSSGMLPDTGGAVSADGGAG AQRGNAAYGPGRRIPADSTGEPTGGRYDALAEMTEEADGRLHMAASGKAGHTGGGATGNVQDAGSVRKTGRQRRSTRDPL AGAFFGTPAVGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60654; Mature: 60522
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLTVDASLTRAAQSMADTGTSDAAESMRRPEDSGAGETGGGFPDADTTLQVLLAATDA CCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH EAALRAATSEEGDAPREHALHRAVAAARSAVPSAARGALDEILYPSAALFTEQRHSALNE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH RRRVLADETVQRRVDGLLQDISVLARAEATEERDLLLEERVGQVRRTMLAGGALAGLDPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DSRNAAARAVSAACAQAARHMAFGGELLTGVPDPAALRNAEKWLARHTDALEPDDMQRLR CCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH HEMDFAADVTRAHELARGYVQRGVPPEPLAPDSKATRAEDMARSMAGDMRREQQRRQQQE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH REGQAEAVWERFSGAADAAGRAAAVYDAPEELRDMLSAAAARRAEHGRLETDWDAFYTAR HCCHHHHHHHHHCCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEE LALTPQTDIWALRHRLSDREFGILRQEREALTRGEEPAARGRLRAAVSAAGLNMSAAAAR EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH RAEQLRMVEEALNALDNPSYTDAARLGRELLRPADRAQAAGVSSGMLPDTGGAVSADGGA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCC GAQRGNAAYGPGRRIPADSTGEPTGGRYDALAEMTEEADGRLHMAASGKAGHTGGGATGN CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC VQDAGSVRKTGRQRRSTRDPLAGAFFGTPAVGG CCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCC >Mature Secondary Structure GGLTVDASLTRAAQSMADTGTSDAAESMRRPEDSGAGETGGGFPDADTTLQVLLAATDA CCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH EAALRAATSEEGDAPREHALHRAVAAARSAVPSAARGALDEILYPSAALFTEQRHSALNE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH RRRVLADETVQRRVDGLLQDISVLARAEATEERDLLLEERVGQVRRTMLAGGALAGLDPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DSRNAAARAVSAACAQAARHMAFGGELLTGVPDPAALRNAEKWLARHTDALEPDDMQRLR CCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH HEMDFAADVTRAHELARGYVQRGVPPEPLAPDSKATRAEDMARSMAGDMRREQQRRQQQE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH REGQAEAVWERFSGAADAAGRAAAVYDAPEELRDMLSAAAARRAEHGRLETDWDAFYTAR HCCHHHHHHHHHCCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEE LALTPQTDIWALRHRLSDREFGILRQEREALTRGEEPAARGRLRAAVSAAGLNMSAAAAR EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH RAEQLRMVEEALNALDNPSYTDAARLGRELLRPADRAQAAGVSSGMLPDTGGAVSADGGA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCC GAQRGNAAYGPGRRIPADSTGEPTGGRYDALAEMTEEADGRLHMAASGKAGHTGGGATGN CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC VQDAGSVRKTGRQRRSTRDPLAGAFFGTPAVGG CCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA