Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78357578

Identifier: 78357578

GI number: 78357578

Start: 2554525

End: 2555448

Strand: Direct

Name: 78357578

Synonym: Dde_2535

Alternate gene names: NA

Gene position: 2554525-2555448 (Clockwise)

Preceding gene: 78357577

Following gene: 78357580

Centisome position: 68.48

GC content: 63.1

Gene sequence:

>924_bases
GTGCTGCGCCTCCTTCATCCGGCTGCCGGTGTCTGCATGTCCAGAGTACCTGATTCCACGCCCCGCGGACATTCTGCACA
GGGCATCCCTCTTGTCCGCAGCGCTGCCGCAGCGTATACAGCAGACATGACATCTTTCGCTTCTTCCCACGCAATCCATT
CAAGCCCGCTGCGGCACTACCGCCGCCAGCACGCTGCGCGTCAGAACCATGTTTCGTTTCAGGTAGTTGTTGATGAAAGC
GATCTATGGATAACTGCCCCGTGCAATATGCACGACCTCGCAGCGGCCACGGTACGGCAGTTGCGCGGCAGCATACACGC
ATGGTCGGCCCTGCATCCGGAGTTTGCCCACAGTCTGACGCCCGTTGCGCCCGCCGCGGGAGCGCCGCCGGTGATCCGGC
GCATGATCCGCGGAGCACAGGTGGCCGGTGTGGGGCCCATGGCCGCCGTGGCCGGCACCATAGCCCAGATGGTGGCCGAA
ACCCTGCACGCGGAACTGCGTACCCGCAACAGCGGCGGCACACCTGACAACCATGACGTGCTGGTGGAAAACGGCGGGGA
TATATTCATGATCTCTGCGCAGGACCGCACGGTAGGCCTGCTGCCCGATCCTGCTTCATCGGCGGTTATCGGCTTTGCCG
TTCCGGCAGAAGCCATGCCGCTTTCCGTCTGTTCTTCATCGGCCACCATAGGGCACTCGCTCAGTCTGGGCCACGGAGAA
CTGGCCAGTGTGGCTGCGGCTGATGCCGCCGTGGCCGACGCAGCCGCCACGGCATTCTGCAACATGCTGCGCACCGCAGA
CGATGTGCAGCGCGTCACCGCCCGTGCCGAAACTCTGAAACAACACGGAGTGCGGGCGGTATTTGTCCAGTGCTGCGGCA
AAATAGGCATATGGGGCGACCTTGAACTGACCGCCGTGGCATAA

Upstream 100 bases:

>100_bases
CGGCGCGAACGACAGAGCCCCCCCTTAGCCTGCAGGCCGCGCTTACCGGTCTGCAGCTTTTGCGCTATCGTCCGGCTTTT
TTTCAGCCTGCCCGGCGCCT

Downstream 100 bases:

>100_bases
ACACAATACGGCGCGCTCCTGCCGGAACGCGCCGCACCGTTTGTGTGGCGGACAGCCGCCGGAATATGCAGACAGGCTCA
GCCTTCCAGCCCGTCTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLRLLHPAAGVCMSRVPDSTPRGHSAQGIPLVRSAAAAYTADMTSFASSHAIHSSPLRHYRRQHAARQNHVSFQVVVDES
DLWITAPCNMHDLAAATVRQLRGSIHAWSALHPEFAHSLTPVAPAAGAPPVIRRMIRGAQVAGVGPMAAVAGTIAQMVAE
TLHAELRTRNSGGTPDNHDVLVENGGDIFMISAQDRTVGLLPDPASSAVIGFAVPAEAMPLSVCSSSATIGHSLSLGHGE
LASVAAADAAVADAAATAFCNMLRTADDVQRVTARAETLKQHGVRAVFVQCCGKIGIWGDLELTAVA

Sequences:

>Translated_307_residues
MLRLLHPAAGVCMSRVPDSTPRGHSAQGIPLVRSAAAAYTADMTSFASSHAIHSSPLRHYRRQHAARQNHVSFQVVVDES
DLWITAPCNMHDLAAATVRQLRGSIHAWSALHPEFAHSLTPVAPAAGAPPVIRRMIRGAQVAGVGPMAAVAGTIAQMVAE
TLHAELRTRNSGGTPDNHDVLVENGGDIFMISAQDRTVGLLPDPASSAVIGFAVPAEAMPLSVCSSSATIGHSLSLGHGE
LASVAAADAAVADAAATAFCNMLRTADDVQRVTARAETLKQHGVRAVFVQCCGKIGIWGDLELTAVA
>Mature_307_residues
MLRLLHPAAGVCMSRVPDSTPRGHSAQGIPLVRSAAAAYTADMTSFASSHAIHSSPLRHYRRQHAARQNHVSFQVVVDES
DLWITAPCNMHDLAAATVRQLRGSIHAWSALHPEFAHSLTPVAPAAGAPPVIRRMIRGAQVAGVGPMAAVAGTIAQMVAE
TLHAELRTRNSGGTPDNHDVLVENGGDIFMISAQDRTVGLLPDPASSAVIGFAVPAEAMPLSVCSSSATIGHSLSLGHGE
LASVAAADAAVADAAATAFCNMLRTADDVQRVTARAETLKQHGVRAVFVQCCGKIGIWGDLELTAVA

Specific function: Unknown

COG id: COG2122

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0280 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023156
- InterPro:   IPR003374
- InterPro:   IPR007183 [H]

Pfam domain/function: PF02424 ApbE [H]

EC number: NA

Molecular weight: Translated: 31982; Mature: 31982

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLLHPAAGVCMSRVPDSTPRGHSAQGIPLVRSAAAAYTADMTSFASSHAIHSSPLRHY
CCEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
RRQHAARQNHVSFQVVVDESDLWITAPCNMHDLAAATVRQLRGSIHAWSALHPEFAHSLT
HHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHCCC
PVAPAAGAPPVIRRMIRGAQVAGVGPMAAVAGTIAQMVAETLHAELRTRNSGGTPDNHDV
CCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
LVENGGDIFMISAQDRTVGLLPDPASSAVIGFAVPAEAMPLSVCSSSATIGHSLSLGHGE
EEECCCCEEEEEECCCEEECCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCEECCCCCH
LASVAAADAAVADAAATAFCNMLRTADDVQRVTARAETLKQHGVRAVFVQCCGKIGIWGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC
LELTAVA
CEEEEEC
>Mature Secondary Structure
MLRLLHPAAGVCMSRVPDSTPRGHSAQGIPLVRSAAAAYTADMTSFASSHAIHSSPLRHY
CCEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
RRQHAARQNHVSFQVVVDESDLWITAPCNMHDLAAATVRQLRGSIHAWSALHPEFAHSLT
HHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHCCC
PVAPAAGAPPVIRRMIRGAQVAGVGPMAAVAGTIAQMVAETLHAELRTRNSGGTPDNHDV
CCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
LVENGGDIFMISAQDRTVGLLPDPASSAVIGFAVPAEAMPLSVCSSSATIGHSLSLGHGE
EEECCCCEEEEEECCCEEECCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCEECCCCCH
LASVAAADAAVADAAATAFCNMLRTADDVQRVTARAETLKQHGVRAVFVQCCGKIGIWGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC
LELTAVA
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA