| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is cscK [H]
Identifier: 78357565
GI number: 78357565
Start: 2542918
End: 2543820
Strand: Reverse
Name: cscK [H]
Synonym: Dde_2522
Alternate gene names: 78357565
Gene position: 2543820-2542918 (Counterclockwise)
Preceding gene: 78357568
Following gene: 78357559
Centisome position: 68.19
GC content: 64.34
Gene sequence:
>903_bases ATGCGCAGACCGCTTGGCGTGGGACTGGGAGAAGTGCTGTGGGATATGCTGCCCGACGGGCCGCAGCTGGGGGGGGCTCC GGCTAATTTCGCCTATCATTTTAATGCGCTGGGCGGGCAGGGTATGATTGTCTCGCGCGTGGGCGATGATGATGCGGGGC GCAGGGCGTGCCGTCTGCTTGCGGAACAGGGGCTGGATGTAAGCCGTATCAGCGTTGACCCGCTGCATCCCACCGGACGT GTGGATGTTCTGCTTTCCGCACAGGGGACGGCTTCATATGTTTTTCCCGATGATGTGGCATGGGATTTTCTGCCTGCCGC CCGCGCTGAGGACACTCTGGCAGGCGGGGCCGCATGTATCTGCTTCGGCACGCTGTGTCAGCGCACTCCGGCCGGACGTG CGGCTGTCCGGTCGTTTCTGCAGGCGGCTCATGCTGCGGTGCTGCGGGTGTTTGACTGTAACCTGAGGCAGAATTTTTAC AGCCCTGAAGTGGTGCAGGATTCATTGCAGCTGGCTGATGTGTTTAAGCTTAATGAAGAAGAACTGGACGTGCTGGCCCC TGCTCTGGGCGTGGCGGATGTGCTGCGCGATGCAGCTGCGCGCCGTGCGGCGCTGCATGCTCTGGTGACCCGTTTCGGGC TGCAGGCCGCGGCGCTGACCCGCGGTGCACAGGGCAGCGTGCTGATGACCGGCGAAAGTTGCCACGAGCATGCCGGCGAA ATGGTGGAGGTGGCGGATACCGTGGGGGCGGGAGACGCCTTTACCGCCGCGCTGGCGCTGGGATGGCTGTGCGGCCTGCC GCCGGAGCAGATACATGCCCGTGCAGCCAGTGTGGCCGCGTATGTGTGCGGTGCGCACGGGGCCATGCCGCCGATGCCTG CAGCATTGCGTCTGCTGCCCTGA
Upstream 100 bases:
>100_bases CATGGGTGCTCCTTGGGGCTGAGAGTATTGATGATACTGACCCTATCGCATATTCTGCGCATGCGGCAAGAGACCGTTAT GCCGAGGGAGGAGACCGACA
Downstream 100 bases:
>100_bases TAATTTTCCGCGCCTTTTCTGCCCTATACGTAAAAAATAAGCCTGCCCGCCGCAGGCTGCCTGCTCTCCACACGCCGGAG CATCGGGCGGCCCGCACTGT
Product: putative fructokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MRRPLGVGLGEVLWDMLPDGPQLGGAPANFAYHFNALGGQGMIVSRVGDDDAGRRACRLLAEQGLDVSRISVDPLHPTGR VDVLLSAQGTASYVFPDDVAWDFLPAARAEDTLAGGAACICFGTLCQRTPAGRAAVRSFLQAAHAAVLRVFDCNLRQNFY SPEVVQDSLQLADVFKLNEEELDVLAPALGVADVLRDAAARRAALHALVTRFGLQAAALTRGAQGSVLMTGESCHEHAGE MVEVADTVGAGDAFTAALALGWLCGLPPEQIHARAASVAAYVCGAHGAMPPMPAALRLLP
Sequences:
>Translated_300_residues MRRPLGVGLGEVLWDMLPDGPQLGGAPANFAYHFNALGGQGMIVSRVGDDDAGRRACRLLAEQGLDVSRISVDPLHPTGR VDVLLSAQGTASYVFPDDVAWDFLPAARAEDTLAGGAACICFGTLCQRTPAGRAAVRSFLQAAHAAVLRVFDCNLRQNFY SPEVVQDSLQLADVFKLNEEELDVLAPALGVADVLRDAAARRAALHALVTRFGLQAAALTRGAQGSVLMTGESCHEHAGE MVEVADTVGAGDAFTAALALGWLCGLPPEQIHARAASVAAYVCGAHGAMPPMPAALRLLP >Mature_300_residues MRRPLGVGLGEVLWDMLPDGPQLGGAPANFAYHFNALGGQGMIVSRVGDDDAGRRACRLLAEQGLDVSRISVDPLHPTGR VDVLLSAQGTASYVFPDDVAWDFLPAARAEDTLAGGAACICFGTLCQRTPAGRAAVRSFLQAAHAAVLRVFDCNLRQNFY SPEVVQDSLQLADVFKLNEEELDVLAPALGVADVLRDAAARRAALHALVTRFGLQAAALTRGAQGSVLMTGESCHEHAGE MVEVADTVGAGDAFTAALALGWLCGLPPEQIHARAASVAAYVCGAHGAMPPMPAALRLLP
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 31372; Mature: 31372
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPLGVGLGEVLWDMLPDGPQLGGAPANFAYHFNALGGQGMIVSRVGDDDAGRRACRLL CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHH AEQGLDVSRISVDPLHPTGRVDVLLSAQGTASYVFPDDVAWDFLPAARAEDTLAGGAACI HHCCCCEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCHHHCCCCCCCHHHCCCHHHH CFGTLCQRTPAGRAAVRSFLQAAHAAVLRVFDCNLRQNFYSPEVVQDSLQLADVFKLNEE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHCCHH ELDVLAPALGVADVLRDAAARRAALHALVTRFGLQAAALTRGAQGSVLMTGESCHEHAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHH MVEVADTVGAGDAFTAALALGWLCGLPPEQIHARAASVAAYVCGAHGAMPPMPAALRLLP HHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC >Mature Secondary Structure MRRPLGVGLGEVLWDMLPDGPQLGGAPANFAYHFNALGGQGMIVSRVGDDDAGRRACRLL CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHH AEQGLDVSRISVDPLHPTGRVDVLLSAQGTASYVFPDDVAWDFLPAARAEDTLAGGAACI HHCCCCEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCHHHCCCCCCCHHHCCCHHHH CFGTLCQRTPAGRAAVRSFLQAAHAAVLRVFDCNLRQNFYSPEVVQDSLQLADVFKLNEE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHCCHH ELDVLAPALGVADVLRDAAARRAALHALVTRFGLQAAALTRGAQGSVLMTGESCHEHAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHH MVEVADTVGAGDAFTAALALGWLCGLPPEQIHARAASVAAYVCGAHGAMPPMPAALRLLP HHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA