Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78357564

Identifier: 78357564

GI number: 78357564

Start: 2541969

End: 2542640

Strand: Direct

Name: 78357564

Synonym: Dde_2521

Alternate gene names: NA

Gene position: 2541969-2542640 (Clockwise)

Preceding gene: 78357563

Following gene: 78357566

Centisome position: 68.15

GC content: 54.32

Gene sequence:

>672_bases
ATGAAACGCAGTGAAATCAACGCTCTGATAAAAGATACCAAAATATTCTTTGACGCTCTGGGGTTCCGCCTGCCCCGCTG
GGCCGGATGGAAGCCCGCGGAATGGAAAGGCAAAGGCGGGCTGGAAGTGGTGCAGAACATGCTGGGCTGGGACATAACCG
ACTATGGTGCCGGCGACTTTGAAAAAAAAGGACTGATTCTTTTCACCATCCGCAACGGTAACCATGCAGCGGGACATCCC
AAGCGCTATGCCGAAAAAATCATGGTGGTCCGCGAAGGACAAGTCTGCCCCATGCATTTTCACTGGTCCAAGACAGAAGA
TATCATCAACCGCGGCGGAGGCAATCTGGTCATCGAACTGTACAACTCCGACAAGGACGAACAGCTTGCCGATACCCCGG
TCACTGTACTCATCGACGGCATTCCGCAGACTGTTCCGGCAGGGGGCACTGTCATCCTTGAACCGGGTGAATCAATCTTT
CTGCCGCAGGGCATGTACCACCGGTTTTACGGTCAGCAGGGGCGCGGCAAAGTGCTGGTGGGTGAAGTGAGTTCGGTCAA
CGATGACAACACCGATAACCGTTTTCTGCACAGCATGCCGCGTTTTCCGCAGATAGAAGAAGATGAGGAGCCTGTGCACC
TGCTGGTAACCGACTATCCCGCATGGGTGTAG

Upstream 100 bases:

>100_bases
CGTTGTTCATCGTGGAAAACACGTTTTCGGTAATCGGAACCGGATTCGGCCAGCGCAAACGCTACTAGCCGCAATCCTGA
CGACCAATACGGAGTTGAGC

Downstream 100 bases:

>100_bases
CCTGCATTTACAGCCCTGCAGAACCTCATGTACTGCCCGTCGTCACAGGCCGCTCCCGCAAGAGAGCGGCCTTTTTTATC
CGCATCTCCGCCGGATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKRSEINALIKDTKIFFDALGFRLPRWAGWKPAEWKGKGGLEVVQNMLGWDITDYGAGDFEKKGLILFTIRNGNHAAGHP
KRYAEKIMVVREGQVCPMHFHWSKTEDIINRGGGNLVIELYNSDKDEQLADTPVTVLIDGIPQTVPAGGTVILEPGESIF
LPQGMYHRFYGQQGRGKVLVGEVSSVNDDNTDNRFLHSMPRFPQIEEDEEPVHLLVTDYPAWV

Sequences:

>Translated_223_residues
MKRSEINALIKDTKIFFDALGFRLPRWAGWKPAEWKGKGGLEVVQNMLGWDITDYGAGDFEKKGLILFTIRNGNHAAGHP
KRYAEKIMVVREGQVCPMHFHWSKTEDIINRGGGNLVIELYNSDKDEQLADTPVTVLIDGIPQTVPAGGTVILEPGESIF
LPQGMYHRFYGQQGRGKVLVGEVSSVNDDNTDNRFLHSMPRFPQIEEDEEPVHLLVTDYPAWV
>Mature_223_residues
MKRSEINALIKDTKIFFDALGFRLPRWAGWKPAEWKGKGGLEVVQNMLGWDITDYGAGDFEKKGLILFTIRNGNHAAGHP
KRYAEKIMVVREGQVCPMHFHWSKTEDIINRGGGNLVIELYNSDKDEQLADTPVTVLIDGIPQTVPAGGTVILEPGESIF
LPQGMYHRFYGQQGRGKVLVGEVSSVNDDNTDNRFLHSMPRFPQIEEDEEPVHLLVTDYPAWV

Specific function: Unknown

COG id: COG3822

COG function: function code R; ABC-type sugar transport system, auxiliary component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25120; Mature: 25120

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSEINALIKDTKIFFDALGFRLPRWAGWKPAEWKGKGGLEVVQNMLGWDITDYGAGDF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
EKKGLILFTIRNGNHAAGHPKRYAEKIMVVREGQVCPMHFHWSKTEDIINRGGGNLVIEL
CCCCEEEEEEECCCCCCCCHHHHHHHEEEEECCCEEEEEEECCCHHHHHHCCCCEEEEEE
YNSDKDEQLADTPVTVLIDGIPQTVPAGGTVILEPGESIFLPQGMYHRFYGQQGRGKVLV
ECCCCCCHHHCCCEEEEECCCCCCCCCCCEEEECCCCEEECCCCHHHHHCCCCCCCEEEE
GEVSSVNDDNTDNRFLHSMPRFPQIEEDEEPVHLLVTDYPAWV
EECCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKRSEINALIKDTKIFFDALGFRLPRWAGWKPAEWKGKGGLEVVQNMLGWDITDYGAGDF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
EKKGLILFTIRNGNHAAGHPKRYAEKIMVVREGQVCPMHFHWSKTEDIINRGGGNLVIEL
CCCCEEEEEEECCCCCCCCHHHHHHHEEEEECCCEEEEEEECCCHHHHHHCCCCEEEEEE
YNSDKDEQLADTPVTVLIDGIPQTVPAGGTVILEPGESIFLPQGMYHRFYGQQGRGKVLV
ECCCCCCHHHCCCEEEEECCCCCCCCCCCEEEECCCCEEECCCCHHHHHCCCCCCCEEEE
GEVSSVNDDNTDNRFLHSMPRFPQIEEDEEPVHLLVTDYPAWV
EECCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA