| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357537
Identifier: 78357537
GI number: 78357537
Start: 2515761
End: 2516789
Strand: Reverse
Name: 78357537
Synonym: Dde_2494
Alternate gene names: NA
Gene position: 2516789-2515761 (Counterclockwise)
Preceding gene: 78357538
Following gene: 78357536
Centisome position: 67.47
GC content: 59.38
Gene sequence:
>1029_bases ATGATCAAGCCCTCCAACTACCAGCCACCCTACACCATTACCCCGGCGATAGTGAATCTGGTCGCCGAGATAGGCGAGAT CATCGGCCGCTACACCGTGCTGGCCGAACAGAACCTGACGCCGCGCCTGCGCCGGGAGAACCGCATCCGTACCATCCAGG CCTCGCTGGCCATTGAGAACAATACGCTCACCCTTGAACAGGTGACCGCCGTGATCGATGGCAAACGGGTGTTGGGTCAC CCCCGCGAGATTCAGGAGGTGCGTAACGCCTTTGCGACCTACGAGGCCATGGAGGACTGGGACGCCAGTGTCGAGGGGGA TTTGCTGGCGGCACACGAGTTGTTGATGCGTGGGCTGGTGGATGAAACGGGTCGATATCGATCCGGCGGGGTCGGCATCT TCCGGGGAGAGCAGTTAGTTCACATGGCTCCTCCTGCTGATCGTGTGCCCAAGCTTATGGCGGATCTCCTGGATTGGCTG GAAAACACCAACGAGCATCCCTTGGTGGCCAGTTGCATTTTTCACTACGAGTTCGAATTCATCCACCCCTTTGCCGACGG TAACGGCCGCATGGGTCGGTTGTGGCAAACCCTGATTCTACGAAACTGGAAGCCGCTGCTGGCCTACCTGCCGGTGGAGA CAGTGATCCGTGATCGCCAGGAAGATTATTACCGGGTACTCGCGGTCGCCGACAGCCAAGCGGATGCCACTCCTTTTGTC GAGTTCATGTTGGGGGCGTTGCGCGATGCCGTGCGCGAGGCTGTGTCGACCGACCATGTAGGCGACCAAGTAACCGACCA AGTAGCGGCGTTGATCCGTGCGATTGGGGGCGGTGAGCTGAGCAGCAACGATTTGATGCAGGCTTTAGGTTTGTCACACC GGCCCACGTTCCGTAACAACTACCTCAACCCGGCCATGGAAGACGAATGGATCGAACGTACCCAACCCGATTCCCCGCGC AGCCCGACTCAGCGCTATCGGTTGACCGGTAAAGGCCAGCGTTGGCTGCAACACCATGCCGACGAGTAG
Upstream 100 bases:
>100_bases TGCCAGCTCTCGATCAGGCCTGCTTTGAAGTCTTCCGCCCCATGTTCGAGTTCATCAAATCGAAGTGCCCGGCGGGTGCG GAAGGAGAGGAGGTTGCGCC
Downstream 100 bases:
>100_bases CAGAGGCATACTTGCGACAAATTTGCCTGGAGCAAATTTGGACCGCCGACAGGCTGGTCCCGAAGGGACGGCCTCCATGG ATGGAGGCCGCACAAACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Fic Family Protein; Cell Filamentation Protein Fic; Fic Protein Family; Filamentation Induced By Camp Family Protein; Fic Family Filamentation Induced By CAMP Protein; Transcriptional Regulator; Fic Protein; Filamentation Induced By CAMP Family Protein; Fic-Domain-Containing Protein; Huntington Interacting Protein HYPE; Fic Protein Involved In; Fic Domain-Containing Protein; Filamentation Induced By Camp Protein Fic; AsnC Family Regulatory Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MIKPSNYQPPYTITPAIVNLVAEIGEIIGRYTVLAEQNLTPRLRRENRIRTIQASLAIENNTLTLEQVTAVIDGKRVLGH PREIQEVRNAFATYEAMEDWDASVEGDLLAAHELLMRGLVDETGRYRSGGVGIFRGEQLVHMAPPADRVPKLMADLLDWL ENTNEHPLVASCIFHYEFEFIHPFADGNGRMGRLWQTLILRNWKPLLAYLPVETVIRDRQEDYYRVLAVADSQADATPFV EFMLGALRDAVREAVSTDHVGDQVTDQVAALIRAIGGGELSSNDLMQALGLSHRPTFRNNYLNPAMEDEWIERTQPDSPR SPTQRYRLTGKGQRWLQHHADE
Sequences:
>Translated_342_residues MIKPSNYQPPYTITPAIVNLVAEIGEIIGRYTVLAEQNLTPRLRRENRIRTIQASLAIENNTLTLEQVTAVIDGKRVLGH PREIQEVRNAFATYEAMEDWDASVEGDLLAAHELLMRGLVDETGRYRSGGVGIFRGEQLVHMAPPADRVPKLMADLLDWL ENTNEHPLVASCIFHYEFEFIHPFADGNGRMGRLWQTLILRNWKPLLAYLPVETVIRDRQEDYYRVLAVADSQADATPFV EFMLGALRDAVREAVSTDHVGDQVTDQVAALIRAIGGGELSSNDLMQALGLSHRPTFRNNYLNPAMEDEWIERTQPDSPR SPTQRYRLTGKGQRWLQHHADE >Mature_342_residues MIKPSNYQPPYTITPAIVNLVAEIGEIIGRYTVLAEQNLTPRLRRENRIRTIQASLAIENNTLTLEQVTAVIDGKRVLGH PREIQEVRNAFATYEAMEDWDASVEGDLLAAHELLMRGLVDETGRYRSGGVGIFRGEQLVHMAPPADRVPKLMADLLDWL ENTNEHPLVASCIFHYEFEFIHPFADGNGRMGRLWQTLILRNWKPLLAYLPVETVIRDRQEDYYRVLAVADSQADATPFV EFMLGALRDAVREAVSTDHVGDQVTDQVAALIRAIGGGELSSNDLMQALGLSHRPTFRNNYLNPAMEDEWIERTQPDSPR SPTQRYRLTGKGQRWLQHHADE
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42794620, Length=215, Percent_Identity=30.2325581395349, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17544594, Length=216, Percent_Identity=31.0185185185185, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24582217, Length=216, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38776; Mature: 38776
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKPSNYQPPYTITPAIVNLVAEIGEIIGRYTVLAEQNLTPRLRRENRIRTIQASLAIEN CCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCHHHEEEEEEEECC NTLTLEQVTAVIDGKRVLGHPREIQEVRNAFATYEAMEDWDASVEGDLLAAHELLMRGLV CCEEHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH DETGRYRSGGVGIFRGEQLVHMAPPADRVPKLMADLLDWLENTNEHPLVASCIFHYEFEF HHCCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEE IHPFADGNGRMGRLWQTLILRNWKPLLAYLPVETVIRDRQEDYYRVLAVADSQADATPFV EECCCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHEEEEEEECCCCCCHHHH EFMLGALRDAVREAVSTDHVGDQVTDQVAALIRAIGGGELSSNDLMQALGLSHRPTFRNN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCC YLNPAMEDEWIERTQPDSPRSPTQRYRLTGKGQRWLQHHADE CCCCCCCHHHHHHCCCCCCCCCHHHEEECCCHHHHHHHCCCC >Mature Secondary Structure MIKPSNYQPPYTITPAIVNLVAEIGEIIGRYTVLAEQNLTPRLRRENRIRTIQASLAIEN CCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCHHHEEEEEEEECC NTLTLEQVTAVIDGKRVLGHPREIQEVRNAFATYEAMEDWDASVEGDLLAAHELLMRGLV CCEEHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH DETGRYRSGGVGIFRGEQLVHMAPPADRVPKLMADLLDWLENTNEHPLVASCIFHYEFEF HHCCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEE IHPFADGNGRMGRLWQTLILRNWKPLLAYLPVETVIRDRQEDYYRVLAVADSQADATPFV EECCCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHEEEEEEECCCCCCHHHH EFMLGALRDAVREAVSTDHVGDQVTDQVAALIRAIGGGELSSNDLMQALGLSHRPTFRNN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCC YLNPAMEDEWIERTQPDSPRSPTQRYRLTGKGQRWLQHHADE CCCCCCCHHHHHHCCCCCCCCCHHHEEECCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA