| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357497
Identifier: 78357497
GI number: 78357497
Start: 2477143
End: 2477610
Strand: Reverse
Name: 78357497
Synonym: Dde_2454
Alternate gene names: NA
Gene position: 2477610-2477143 (Counterclockwise)
Preceding gene: 78357503
Following gene: 78357496
Centisome position: 66.42
GC content: 54.7
Gene sequence:
>468_bases ATGAATATCCTCGACGTTGTTTTTGCACTCATCGGTGGTTTTTTTCTTATACGCGGGCTTTTTCGCGGCCTTATGATCGA GGTTGCCGCGGTTGCTGGGCTTGTGGGCGGTTTTTTTCTGGCCAATGCCTATTACATGCAGGCTGTGCCGTATGTGGGGC GGTTTGTTTCCGCCGGATGGGCTGAAATTGTCTCGTATGTGCTTATTTTTCTGGGCGTCATGGTGCTGTGCACGCTGGCT GCCGTAGGGCTGCGCAAACTGCTTGAAGCCTCCGGCGGGGGACTGCTGGACAGCGTGGGCGGCGGCATTGCGGGACTGGC AAAAGCGCTTATCATCTGCCTGGTCATTTTTGCGGTGCTGAACAAATTCGTACCCGACATGCAGTTTCTCCGCGAATCCA GAGTGGCGCCCTATCTTGCCCGTGCCGCCGAACTTATCGACAGACATATTCCTGAAAACGCGTTCTAG
Upstream 100 bases:
>100_bases CTTTTCCATTCTTCCGGTTTCTTCCGGATTCTGGTAGACGTGCCAGAGCATCCGGCGCGGTGCCGGTGCGTGAAACTCAG CAAGTACGACAGGGGCCCCT
Downstream 100 bases:
>100_bases CCGTGCGGCCGCACCTGCGGCGTCTGCCGGAAGCGCATTAAAAAAAACGGTGATTTTCAATGAGCAGCAATACCGCACCT GCGGCGCTGGATGAACTGAC
Product: colicin V production family protein
Products: NA
Alternate protein names: Colicin V Production Protein
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNILDVVFALIGGFFLIRGLFRGLMIEVAAVAGLVGGFFLANAYYMQAVPYVGRFVSAGWAEIVSYVLIFLGVMVLCTLA AVGLRKLLEASGGGLLDSVGGGIAGLAKALIICLVIFAVLNKFVPDMQFLRESRVAPYLARAAELIDRHIPENAF
Sequences:
>Translated_155_residues MNILDVVFALIGGFFLIRGLFRGLMIEVAAVAGLVGGFFLANAYYMQAVPYVGRFVSAGWAEIVSYVLIFLGVMVLCTLA AVGLRKLLEASGGGLLDSVGGGIAGLAKALIICLVIFAVLNKFVPDMQFLRESRVAPYLARAAELIDRHIPENAF >Mature_155_residues MNILDVVFALIGGFFLIRGLFRGLMIEVAAVAGLVGGFFLANAYYMQAVPYVGRFVSAGWAEIVSYVLIFLGVMVLCTLA AVGLRKLLEASGGGLLDSVGGGIAGLAKALIICLVIFAVLNKFVPDMQFLRESRVAPYLARAAELIDRHIPENAF
Specific function: Unknown
COG id: COG1286
COG function: function code R; Uncharacterized membrane protein, required for colicin V production
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16557; Mature: 16557
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILDVVFALIGGFFLIRGLFRGLMIEVAAVAGLVGGFFLANAYYMQAVPYVGRFVSAGW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AEIVSYVLIFLGVMVLCTLAAVGLRKLLEASGGGLLDSVGGGIAGLAKALIICLVIFAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH NKFVPDMQFLRESRVAPYLARAAELIDRHIPENAF HHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNILDVVFALIGGFFLIRGLFRGLMIEVAAVAGLVGGFFLANAYYMQAVPYVGRFVSAGW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AEIVSYVLIFLGVMVLCTLAAVGLRKLLEASGGGLLDSVGGGIAGLAKALIICLVIFAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH NKFVPDMQFLRESRVAPYLARAAELIDRHIPENAF HHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA