| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357495
Identifier: 78357495
GI number: 78357495
Start: 2475064
End: 2476293
Strand: Reverse
Name: 78357495
Synonym: Dde_2452
Alternate gene names: NA
Gene position: 2476293-2475064 (Counterclockwise)
Preceding gene: 78357496
Following gene: 78357492
Centisome position: 66.38
GC content: 63.09
Gene sequence:
>1230_bases ATGAAACTTGCCGGTGACCGGCGGCGTGCGGCGTGTTCACCGCGCAGGGCGTCTTTCGGGGCGCAGGGGCGCGGCCATGG AACCGCTCCTTGCATCCGGAGATATTCAGGCGCTTCCGCTTCCGGCGGGGGCGCCTTTGACGTGCCGTCGTGTCTGCCCG GTCCTGTCCGCAACGGCCTGTGGCTGCAATGCGGGTTCTGCGGGCAGGGGTGTGCCCGGCAGCAATGCAGGCCCGGACCG GAGGCTGACGGCATGGAGACATGCGCACAGGCGGTGGCGCAGTGCGTGAAACTGTGGCTTGAGGAGCGCATGCTGGACAG CGCTGCTCTGGCCTTTATGCGCGATTCGCTGGAATTGCACGAAGCGCAGACGTGGCTGACCGGTCATGGGCCTGACGCTG CCGGTTGTGTGCCGGTACCTGAGGCGCTGCTGGAGTATCTGTGTTTTCCCGACGGGCCGCTGGAGCAGGCGGTGGAAGCG GCGCTGCAGCGTAGCGGTGCTGTTGCGGGGTGCTTTTCTGTTTACGGCCTTGCTGCGGCGGTATGCGCAAGGCTGGGTGA ACCGCGCATTACCATCAGTCGCCCGGCAGCGCACGGAGACACGGGGTGGAGTGTATGCGCCGTGCTGTCTGCGGAAATGA CAGAAAAGCTTGTGGGGCGCCTGCGGCTGGAGCGGATTACCGCCCCTGTTGCTGCAGACTGCGGCAGCCGCGGGGAAAAC GGCAATGTAAAGCTGCGCCTTTATCTGCGGCGTCTGCGTCTCGGTTTGACCCCGTTTCGCTGTGCAATGCTGCGGCAGTA TGTGGAATGCATGCCGCAGTCTGACCCTCTGTTTTATGAGGGACTGGATGTCTGGGCGCAATTGCTCGAATCTGCAGGTG ACAGGCTGCAGGATGCGGAGTCCGGAAAGGAAGCGCTTTTTGCCGCCTTGTCCGTGCGGCATACGCGGCTTGCCCGTTCT CTGCGCGAGGCACGCGAGTTTGCTCTGCGCCTGCGGCGTTACAACATGGAAACGCTGATGATGCAGGGTATACGGCCACC AGCCGAAGATGAAGACGCGCTGCAGCGCGGAGTACAGATGCTTGAACGCATAAGCGTTGCTGTGTTCCGTAAGCTGCCTG CGGGAGCAGGCATTGCGGAGCACGATCTGGGAAGCTTCGGGAACGGTATGTCTGCCGACGAATTCGATCCCGCGGCAGAG GTGCGGGAGCTCATGCGTCTTCTTTCATGA
Upstream 100 bases:
>100_bases CGGTTTGAGGCGATGGAAGCGTTGTGCCGCCAGCGCGGTCTTGATTTTCCGGCACTGAGCTTTGAGGAAAAAGACGCGCT GTGGAATGAGGTGAAACAGC
Downstream 100 bases:
>100_bases GCAGTAACAGTGTGCAGAACCCCCGCTGCGGTCACGGACGGCAGCGGGGGTTACGATTTGCGGTCATACCATGGTGTCAA TGTGCTCTCCCAGTCCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MKLAGDRRRAACSPRRASFGAQGRGHGTAPCIRRYSGASASGGGAFDVPSCLPGPVRNGLWLQCGFCGQGCARQQCRPGP EADGMETCAQAVAQCVKLWLEERMLDSAALAFMRDSLELHEAQTWLTGHGPDAAGCVPVPEALLEYLCFPDGPLEQAVEA ALQRSGAVAGCFSVYGLAAAVCARLGEPRITISRPAAHGDTGWSVCAVLSAEMTEKLVGRLRLERITAPVAADCGSRGEN GNVKLRLYLRRLRLGLTPFRCAMLRQYVECMPQSDPLFYEGLDVWAQLLESAGDRLQDAESGKEALFAALSVRHTRLARS LREAREFALRLRRYNMETLMMQGIRPPAEDEDALQRGVQMLERISVAVFRKLPAGAGIAEHDLGSFGNGMSADEFDPAAE VRELMRLLS
Sequences:
>Translated_409_residues MKLAGDRRRAACSPRRASFGAQGRGHGTAPCIRRYSGASASGGGAFDVPSCLPGPVRNGLWLQCGFCGQGCARQQCRPGP EADGMETCAQAVAQCVKLWLEERMLDSAALAFMRDSLELHEAQTWLTGHGPDAAGCVPVPEALLEYLCFPDGPLEQAVEA ALQRSGAVAGCFSVYGLAAAVCARLGEPRITISRPAAHGDTGWSVCAVLSAEMTEKLVGRLRLERITAPVAADCGSRGEN GNVKLRLYLRRLRLGLTPFRCAMLRQYVECMPQSDPLFYEGLDVWAQLLESAGDRLQDAESGKEALFAALSVRHTRLARS LREAREFALRLRRYNMETLMMQGIRPPAEDEDALQRGVQMLERISVAVFRKLPAGAGIAEHDLGSFGNGMSADEFDPAAE VRELMRLLS >Mature_409_residues MKLAGDRRRAACSPRRASFGAQGRGHGTAPCIRRYSGASASGGGAFDVPSCLPGPVRNGLWLQCGFCGQGCARQQCRPGP EADGMETCAQAVAQCVKLWLEERMLDSAALAFMRDSLELHEAQTWLTGHGPDAAGCVPVPEALLEYLCFPDGPLEQAVEA ALQRSGAVAGCFSVYGLAAAVCARLGEPRITISRPAAHGDTGWSVCAVLSAEMTEKLVGRLRLERITAPVAADCGSRGEN GNVKLRLYLRRLRLGLTPFRCAMLRQYVECMPQSDPLFYEGLDVWAQLLESAGDRLQDAESGKEALFAALSVRHTRLARS LREAREFALRLRRYNMETLMMQGIRPPAEDEDALQRGVQMLERISVAVFRKLPAGAGIAEHDLGSFGNGMSADEFDPAAE VRELMRLLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44285; Mature: 44285
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAGDRRRAACSPRRASFGAQGRGHGTAPCIRRYSGASASGGGAFDVPSCLPGPVRNGL CCCCCCCHHHCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC WLQCGFCGQGCARQQCRPGPEADGMETCAQAVAQCVKLWLEERMLDSAALAFMRDSLELH EEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAQTWLTGHGPDAAGCVPVPEALLEYLCFPDGPLEQAVEAALQRSGAVAGCFSVYGLAAA HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH VCARLGEPRITISRPAAHGDTGWSVCAVLSAEMTEKLVGRLRLERITAPVAADCGSRGEN HHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCC GNVKLRLYLRRLRLGLTPFRCAMLRQYVECMPQSDPLFYEGLDVWAQLLESAGDRLQDAE CCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SGKEALFAALSVRHTRLARSLREAREFALRLRRYNMETLMMQGIRPPAEDEDALQRGVQM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LERISVAVFRKLPAGAGIAEHDLGSFGNGMSADEFDPAAEVRELMRLLS HHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure MKLAGDRRRAACSPRRASFGAQGRGHGTAPCIRRYSGASASGGGAFDVPSCLPGPVRNGL CCCCCCCHHHCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC WLQCGFCGQGCARQQCRPGPEADGMETCAQAVAQCVKLWLEERMLDSAALAFMRDSLELH EEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAQTWLTGHGPDAAGCVPVPEALLEYLCFPDGPLEQAVEAALQRSGAVAGCFSVYGLAAA HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH VCARLGEPRITISRPAAHGDTGWSVCAVLSAEMTEKLVGRLRLERITAPVAADCGSRGEN HHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCC GNVKLRLYLRRLRLGLTPFRCAMLRQYVECMPQSDPLFYEGLDVWAQLLESAGDRLQDAE CCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SGKEALFAALSVRHTRLARSLREAREFALRLRRYNMETLMMQGIRPPAEDEDALQRGVQM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LERISVAVFRKLPAGAGIAEHDLGSFGNGMSADEFDPAAEVRELMRLLS HHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA