Click here to switch to the map view.

The map label for this gene is ydiK [C]

Identifier: 78357491

GI number: 78357491

Start: 2472704

End: 2473951

Strand: Reverse

Name: ydiK [C]

Synonym: Dde_2448

Alternate gene names: 78357491

Gene position: 2473951-2472704 (Counterclockwise)

Preceding gene: 78357492

Following gene: 78357490

Centisome position: 66.32

GC content: 57.29

Gene sequence:

>1248_bases
ATGACTGCAGAACCCGTTTCCGGTGAGGGGGCAGAACGCACCGCAGGGCCTGCCGCCGCATCCGGCGCCGTAACCGGCGC
TGCATCCGGCGGCAGAAAGCCGGACTCCGCACCCGGCGCGGCGCTGTTGCCCGCCAGCAGGGTATACGCCATTTCGCTGG
TGCTGCTGCTGCTTTTTTCTCTTTCGCTCAGCTATCGTCTGCTGGAGCCTTTTCTGCACACGTTCATCATGGCCATAGTG
CTTTCGGCCATATGTTATCCGCTGTACAACAAGGTGCTGCAGCGTACCGGGCACCGCAGCCGGACGCTTGCTTCGCTGGC
GGTGCTGCTCTTTTTATGCATCTGCATCGCACTGCCTCTGTTCATCTTTGTGACGGGGCTTATTCCGCAGGCGGTGCAAA
GCGTGACCGCAGTCAACAACTGGATAAATCATACCGATTTTGACCAGCTTTTCGGGGCGGGCAGGCTTGAACAGTATCTG
GCATGGGTGCACCAGCATCTGCCGTTCATCGATGCTTCCAAGATAGACCTGCGGGCTGAATTCATCAGCTTTTCACGCAG
GATGGGGCAGACGCTGCTGGAAGGCGGCACCTATCTGCTGGGCAACGCCCTCACGTTGTTTTTTCAGTTTCTGCTTATGC
TGCTGATTGTCTTTTTTATGTTGAAAGACGGTAAAAAGATGCTGCAGGTGGTCAAGTATATGTGCCCGCTGCATGAAGAT
CAGGAAGACGCCATTCTGCTTAACCTGCGCAGCGTGAGCAAATCTGTGCTGGTCGGCGGTCTGCTTGTGGCGGCTTTGCA
GGGGCTTGCCGGGGGCATCGGACTGGCTCTTGTGGGTATTCCCGCGCTGTTCTGGGGCACCGTCATGGGGTTTGCCTCGC
TGGTTCCCGTGGTGGGCACCGGTCTGGTCTGGATGCCGGCCTGTCTGTATCTGCTGCTTATGGGGCAATGGCAGTCCAGC
CTGTTTCTGTTTGTCTGGTCCGCCGTGGGTGTGGCCAGCATAGACAGTTTTCTGCGTCCGTACTTCATGCGGGGCAGTGC
AGGCATGTCCACGTTTTTTATCTTTATGTCCATAATGGGGGGCATAAAGGTGTTCGGCATGGCCGGTGTTCTTTACGGGC
CGCTCATTCTGGGATTCACCATGGTCATGCTGCGGCTTTACGGCGAAGAATTCAGCGAAGTGCTGTCCAGCCGGTCCGTT
TCGCGCGGTGAAGCCAGACGTCAGCAGCGGGCACTGGAATCGAAATAA

Upstream 100 bases:

>100_bases
TTGTTTTTTGCATATGACACGTGCGGCGCATGTGTGCCGTACGCTGCTGCGCGGCACGACAGCCGGTGCTACTGATTAAC
ATTATGACGAGGTATATTTG

Downstream 100 bases:

>100_bases
AACGTGGCCGGCCGGCTTGCCTGCCGGGGGGTTCTGCGTTATCTCCACTGTGCCGTCACAGACGGTAGGCGTGCCATCCC
CCCCGGCACGCCGGGGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTAEPVSGEGAERTAGPAAASGAVTGAASGGRKPDSAPGAALLPASRVYAISLVLLLLFSLSLSYRLLEPFLHTFIMAIV
LSAICYPLYNKVLQRTGHRSRTLASLAVLLFLCICIALPLFIFVTGLIPQAVQSVTAVNNWINHTDFDQLFGAGRLEQYL
AWVHQHLPFIDASKIDLRAEFISFSRRMGQTLLEGGTYLLGNALTLFFQFLLMLLIVFFMLKDGKKMLQVVKYMCPLHED
QEDAILLNLRSVSKSVLVGGLLVAALQGLAGGIGLALVGIPALFWGTVMGFASLVPVVGTGLVWMPACLYLLLMGQWQSS
LFLFVWSAVGVASIDSFLRPYFMRGSAGMSTFFIFMSIMGGIKVFGMAGVLYGPLILGFTMVMLRLYGEEFSEVLSSRSV
SRGEARRQQRALESK

Sequences:

>Translated_415_residues
MTAEPVSGEGAERTAGPAAASGAVTGAASGGRKPDSAPGAALLPASRVYAISLVLLLLFSLSLSYRLLEPFLHTFIMAIV
LSAICYPLYNKVLQRTGHRSRTLASLAVLLFLCICIALPLFIFVTGLIPQAVQSVTAVNNWINHTDFDQLFGAGRLEQYL
AWVHQHLPFIDASKIDLRAEFISFSRRMGQTLLEGGTYLLGNALTLFFQFLLMLLIVFFMLKDGKKMLQVVKYMCPLHED
QEDAILLNLRSVSKSVLVGGLLVAALQGLAGGIGLALVGIPALFWGTVMGFASLVPVVGTGLVWMPACLYLLLMGQWQSS
LFLFVWSAVGVASIDSFLRPYFMRGSAGMSTFFIFMSIMGGIKVFGMAGVLYGPLILGFTMVMLRLYGEEFSEVLSSRSV
SRGEARRQQRALESK
>Mature_414_residues
TAEPVSGEGAERTAGPAAASGAVTGAASGGRKPDSAPGAALLPASRVYAISLVLLLLFSLSLSYRLLEPFLHTFIMAIVL
SAICYPLYNKVLQRTGHRSRTLASLAVLLFLCICIALPLFIFVTGLIPQAVQSVTAVNNWINHTDFDQLFGAGRLEQYLA
WVHQHLPFIDASKIDLRAEFISFSRRMGQTLLEGGTYLLGNALTLFFQFLLMLLIVFFMLKDGKKMLQVVKYMCPLHEDQ
EDAILLNLRSVSKSVLVGGLLVAALQGLAGGIGLALVGIPALFWGTVMGFASLVPVVGTGLVWMPACLYLLLMGQWQSSL
FLFVWSAVGVASIDSFLRPYFMRGSAGMSTFFIFMSIMGGIKVFGMAGVLYGPLILGFTMVMLRLYGEEFSEVLSSRSVS
RGEARRQQRALESK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=354, Percent_Identity=25.4237288135593, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 45076; Mature: 44945

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAEPVSGEGAERTAGPAAASGAVTGAASGGRKPDSAPGAALLPASRVYAISLVLLLLFS
CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LSLSYRLLEPFLHTFIMAIVLSAICYPLYNKVLQRTGHRSRTLASLAVLLFLCICIALPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FIFVTGLIPQAVQSVTAVNNWINHTDFDQLFGAGRLEQYLAWVHQHLPFIDASKIDLRAE
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
FISFSRRMGQTLLEGGTYLLGNALTLFFQFLLMLLIVFFMLKDGKKMLQVVKYMCPLHED
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
QEDAILLNLRSVSKSVLVGGLLVAALQGLAGGIGLALVGIPALFWGTVMGFASLVPVVGT
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLVWMPACLYLLLMGQWQSSLFLFVWSAVGVASIDSFLRPYFMRGSAGMSTFFIFMSIMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GIKVFGMAGVLYGPLILGFTMVMLRLYGEEFSEVLSSRSVSRGEARRQQRALESK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]