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The map label for this gene is 78357464

Identifier: 78357464

GI number: 78357464

Start: 2444432

End: 2445400

Strand: Reverse

Name: 78357464

Synonym: Dde_2421

Alternate gene names: NA

Gene position: 2445400-2444432 (Counterclockwise)

Preceding gene: 78357465

Following gene: 78357461

Centisome position: 65.56

GC content: 64.29

Gene sequence:

>969_bases
ATGGTCCGGCGCGGAGCTTCGCGCTGGTGGTGCGATGTGGTGCCTCTGCTGGCGGCTTCCGGACTGCGTGTGCGGGCCGG
AGTAGCTCCGGCATGGCCGCTGGTGCTGGCATCGCGGGGTATTCCCTACCGGCTGCAGCACCGTTCATGGGGGGCGGCGT
TGTATGTGCCGCTGCTTTATGAGCGTCTGGCTGCCGCGGAAATACTCCGCGCCGAACATGAAAATACCCCCGCCGCAGCG
GTGCCGCTTCCCGCACCGGTTTTTCCAACTGCGGCAGTCACTTACTGGGTGCTGCTCTGTCTGGCCGTCTGGCACGGCGT
GCGTATGCACTGGTGGCCGTGGCTCAATCATTTTTTACCAGCTGTTGGCGGGCTTTCTGCGGAACAATGGGCCGAAGCCG
GACGTATGGACGGCATGCGTGTGCTGGTGGACCGCGAGTGGTTCCGCGTTGTGACCGCGCTTACTCTGCACGCCGACAGC
GGCCATCTGCTGGGCAATGTTGTTTCCGGCGGTGTGTTTATGCCTTTGCTCTGCCGTCGCACCGGTGCCGGTGCGGGCTG
GCTGCTTGTGCTGCTGGCCGGTGCCGCCGGCAATGTCTGCAGTGTTCTGTTTTCCGGCTATGACTATCTGAGTATGGGGG
CCTCCACAGGTGTCTTCGGCGCTGTGGGGGCTTTGTGCGGCATAACGCTGGCTCTGGAGGGCAGGCAGGGCCGTGTGAAG
GCTTTTGCGGTCATTGCTGCAGGACTGGGGCTGCTTGCCATGCTGGGCATGGAGGGAGAACGTACCGACATTACAGCACA
TGTGGCCGGACTTGTGTGCGGTTTTGCCGCGGGCAGGCTGAGCGGAGGCCTGCTGCATCCCGGGGGGGCCGCCGTTGTCA
GCCGCAGGTGGATGCAGACATGCTGCGGACTGGCCGCAGTGCTGCTGACAGGCGCCGCCTGGGGCTGCGCTCTGGCTGTG
TATATGTAG

Upstream 100 bases:

>100_bases
CGATGCGGATGGTCCGCGGCGGAAATAGCCTGTGGCCATTTCTGCCGGACGTTCAGGTACCATTCTGCGGGGCGGGACGA
CCGGGACAGGCAGACACCGC

Downstream 100 bases:

>100_bases
CGGCTGTGGTTTTATCTTTCATCTGTACCGGCAGTATGTTGCATTATATGCCGGAATTTTTTGTGCGGCAGTTGCGCACA
GCAGAACGGCGGCGGAACCT

Product: rhomboid family protein

Products: NA

Alternate protein names: Rhomboid Family Membrane Protein

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MVRRGASRWWCDVVPLLAASGLRVRAGVAPAWPLVLASRGIPYRLQHRSWGAALYVPLLYERLAAAEILRAEHENTPAAA
VPLPAPVFPTAAVTYWVLLCLAVWHGVRMHWWPWLNHFLPAVGGLSAEQWAEAGRMDGMRVLVDREWFRVVTALTLHADS
GHLLGNVVSGGVFMPLLCRRTGAGAGWLLVLLAGAAGNVCSVLFSGYDYLSMGASTGVFGAVGALCGITLALEGRQGRVK
AFAVIAAGLGLLAMLGMEGERTDITAHVAGLVCGFAAGRLSGGLLHPGGAAVVSRRWMQTCCGLAAVLLTGAAWGCALAV
YM

Sequences:

>Translated_322_residues
MVRRGASRWWCDVVPLLAASGLRVRAGVAPAWPLVLASRGIPYRLQHRSWGAALYVPLLYERLAAAEILRAEHENTPAAA
VPLPAPVFPTAAVTYWVLLCLAVWHGVRMHWWPWLNHFLPAVGGLSAEQWAEAGRMDGMRVLVDREWFRVVTALTLHADS
GHLLGNVVSGGVFMPLLCRRTGAGAGWLLVLLAGAAGNVCSVLFSGYDYLSMGASTGVFGAVGALCGITLALEGRQGRVK
AFAVIAAGLGLLAMLGMEGERTDITAHVAGLVCGFAAGRLSGGLLHPGGAAVVSRRWMQTCCGLAAVLLTGAAWGCALAV
YM
>Mature_322_residues
MVRRGASRWWCDVVPLLAASGLRVRAGVAPAWPLVLASRGIPYRLQHRSWGAALYVPLLYERLAAAEILRAEHENTPAAA
VPLPAPVFPTAAVTYWVLLCLAVWHGVRMHWWPWLNHFLPAVGGLSAEQWAEAGRMDGMRVLVDREWFRVVTALTLHADS
GHLLGNVVSGGVFMPLLCRRTGAGAGWLLVLLAGAAGNVCSVLFSGYDYLSMGASTGVFGAVGALCGITLALEGRQGRVK
AFAVIAAGLGLLAMLGMEGERTDITAHVAGLVCGFAAGRLSGGLLHPGGAAVVSRRWMQTCCGLAAVLLTGAAWGCALAV
YM

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33972; Mature: 33972

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRGASRWWCDVVPLLAASGLRVRAGVAPAWPLVLASRGIPYRLQHRSWGAALYVPLLY
CCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHH
ERLAAAEILRAEHENTPAAAVPLPAPVFPTAAVTYWVLLCLAVWHGVRMHWWPWLNHFLP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AVGGLSAEQWAEAGRMDGMRVLVDREWFRVVTALTLHADSGHLLGNVVSGGVFMPLLCRR
HHCCCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHEECCCCCHHHHHHCCHHHHHHHHHH
TGAGAGWLLVLLAGAAGNVCSVLFSGYDYLSMGASTGVFGAVGALCGITLALEGRQGRVK
CCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCHH
AFAVIAAGLGLLAMLGMEGERTDITAHVAGLVCGFAAGRLSGGLLHPGGAAVVSRRWMQT
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
CCGLAAVLLTGAAWGCALAVYM
HHHHHHHHHHCCHHHHHHEECC
>Mature Secondary Structure
MVRRGASRWWCDVVPLLAASGLRVRAGVAPAWPLVLASRGIPYRLQHRSWGAALYVPLLY
CCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHH
ERLAAAEILRAEHENTPAAAVPLPAPVFPTAAVTYWVLLCLAVWHGVRMHWWPWLNHFLP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AVGGLSAEQWAEAGRMDGMRVLVDREWFRVVTALTLHADSGHLLGNVVSGGVFMPLLCRR
HHCCCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHEECCCCCHHHHHHCCHHHHHHHHHH
TGAGAGWLLVLLAGAAGNVCSVLFSGYDYLSMGASTGVFGAVGALCGITLALEGRQGRVK
CCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCHH
AFAVIAAGLGLLAMLGMEGERTDITAHVAGLVCGFAAGRLSGGLLHPGGAAVVSRRWMQT
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
CCGLAAVLLTGAAWGCALAVYM
HHHHHHHHHHCCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA