| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is arnT2 [H]
Identifier: 78357463
GI number: 78357463
Start: 2442202
End: 2444289
Strand: Direct
Name: arnT2 [H]
Synonym: Dde_2420
Alternate gene names: 78357463
Gene position: 2442202-2444289 (Clockwise)
Preceding gene: 78357462
Following gene: 78357469
Centisome position: 65.47
GC content: 60.2
Gene sequence:
>2088_bases ATGACGCAAACTGAAAACACTCCCGATGCCGGTCAGCACGATCTGCACTCACAGACCGTCACGCCCGACGCTTCGACTGA AGCGGCACCGGCCGCACCGCAGCGTACAGTCTGCGAACGCATTCTGGATATTCTGGCTTTTCAGCCCCTTATTCCGCTCA CTATTCTTCTGGCGCTGCAGACCGTGTTCATGCTTGACGCACGCGCGCTGTGGTATTCCGACGAAGTCCGCTATGCCAAC GTGTTCGAACACGTGGTCAATGCCGGTAAATGGATTGTGCTGCACCTGAACGGTGTGCCCTACCCCGACAAACCCCCTGT CTACTTCTGGCTGCTGGAAGGCATCAGGCAGGGTATGCAGGCTGCCGGTATCGCCGGTGACGCTCCGCAGGGCATCGGGC CGCGCCTGTTCTTCAGCGGTGCGGCTGTTTCTGCCCTGTTTTATATCTGGGCCACATACGCACTGGCCCGGCGTGTGGCA GCCGCAGACAAGCGCACGGCTCTGGGAGCCGGACTTGTACTGCTCAGCGTATTCTACTTCATCGGTGTGTCGCACTATTC GCGCATGGACCTGCTCTTCGCCGCACTGATCACGCTCAGCCACATATGCCTTTTCACCGGCTGGAAAAAAGAAAAATCCA CTTTCTGGATTGTCTGCGGTTTCGCCTTCGCCGCGCTGGCTACCCTGACCAAAGGCCCTCTGGGGCTTGCCTTTCCGCTT GTCACATCGGTGCTCTTTCTGCTGTGGCGCGGCAAACCGCGGCGGCTGGCAGGTGCAGATGTGGCGGCCGGTGCCGGTGT CATGCTCTTTATCCTGCTGGCCTGGGTCATGGGCGCGTATCTGACGGAACAGCCGGACTTTCTCTACAACATCTTCCATG ACCAGATATACCGCAGAGCCACCCATACATGGCACCACTCGCAGCCGTGGTGGCACTATATGGCAACTCTGCCCGCCGCC TGGATGCCGTGGACCCTGCTGCTGCCCGTGCTGCCTTTCGGCTTTCTGCTGAGTAAAAAAGGGGCCCGTGCCGTGGCCGC TTCGCGCACTCCGGAAAAAGAAGGCATGGCCTATCTGTGGATAGCTTTTCTCAACGGATTCGCCATTCTTTCGGCCGTCA GCATCAAAATCATCATCTACCTGCTGCCTCTTTTCGCCCCGCTGGCGGTGCTTACCGCAGGCGGCATACTGTCCCTTTCA CGCGCACGCGCCAAATGGCTCATGCGGCTGATGGCACTGCTGCTGCTGGCGCTGGCCGCAGCGCTGGTCACCCTGCAGCT GGGGCAGATGTTCGGCTGGGAATGGCTGACCAAAGCCGTCCGCTGGCCGCTGGCTCTGGAAGGATTGTGGATTCTTGCCG CAGTCAGTGCAGCAGGAGCGGCAATCATGTGGGTTGCGGCGCCTGCCGCCGGCGGGGCCGGTGCGCTGCTGCTGGCAGTG CTGTTCACCACCGTATGGATTCAGCCGCTGGGACTTATCACTGCTCCCTCCATGGATAACGTGATGAGCCCGCGCATGCA GGGTGAGCTTATCGGCAGCTACATAGAAAAAGGCTACACCCCCGTGACCTATAAAGTCTATTCGGGCACTTATACGTTCT ACGCCGGTGCCGACCTGCTGGAACTGGACGAATGGGCCGATGTGGATGCCGCCGTGTCAGCCCACCGGAAAACCGTGGTC GCCATGCGTACCAAACACTGGGACACATGGGAAAACAAACCCGCAGACATGCGGGAGGTAAGCCGGCAGTGGATTGTGGA TCAGGAATATGTCGTTGCCGTGCGCGAGACATCCTCCCCCGACCAAACAGAGGTCTCTGCCGGAACAGAGGTCTCTGCCC AAACAGAGGTACCTGCGGAGTCCGGTCAAACCGGTGAGCATGCTGACCTGCCCGCAGATTCAGCCACCGCGCCGGTTCAG CTTCCCGCTGCCAATGCCACCGACAGTACGGCAACACAGCAATCAGCCATAACGCCCTCTGCCGACATGCCTGCGGACGA CGCTTCCCAAGCGGACACCGCCGCAGAAGAGGGGCATGAGACATCCCCTGCAGATGCTCCCGCGCAGGGCAATGCCACCA CCATCTGA
Upstream 100 bases:
>100_bases GGACAGCACCATGCGAGCGATGTTTTTTTCGGCACGCTTACGGGTGCTTTTTCCGCTTTACTCATGCACACCGTCTGGAC GCACCTGAACAGGAAAAACA
Downstream 100 bases:
>100_bases CAGACGGAGTACAATCCATGAAAAAACACGGCGGCGGAACACAGGTTCCGCCGCCGTTCTGCTGTGCGCAACTGCCGCAC AAAAAATTCCGGCATATAAT
Product: dolichyl-phosphate-mannose-protein mannosyltransferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase 2; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase 2 [H]
Number of amino acids: Translated: 695; Mature: 694
Protein sequence:
>695_residues MTQTENTPDAGQHDLHSQTVTPDASTEAAPAAPQRTVCERILDILAFQPLIPLTILLALQTVFMLDARALWYSDEVRYAN VFEHVVNAGKWIVLHLNGVPYPDKPPVYFWLLEGIRQGMQAAGIAGDAPQGIGPRLFFSGAAVSALFYIWATYALARRVA AADKRTALGAGLVLLSVFYFIGVSHYSRMDLLFAALITLSHICLFTGWKKEKSTFWIVCGFAFAALATLTKGPLGLAFPL VTSVLFLLWRGKPRRLAGADVAAGAGVMLFILLAWVMGAYLTEQPDFLYNIFHDQIYRRATHTWHHSQPWWHYMATLPAA WMPWTLLLPVLPFGFLLSKKGARAVAASRTPEKEGMAYLWIAFLNGFAILSAVSIKIIIYLLPLFAPLAVLTAGGILSLS RARAKWLMRLMALLLLALAAALVTLQLGQMFGWEWLTKAVRWPLALEGLWILAAVSAAGAAIMWVAAPAAGGAGALLLAV LFTTVWIQPLGLITAPSMDNVMSPRMQGELIGSYIEKGYTPVTYKVYSGTYTFYAGADLLELDEWADVDAAVSAHRKTVV AMRTKHWDTWENKPADMREVSRQWIVDQEYVVAVRETSSPDQTEVSAGTEVSAQTEVPAESGQTGEHADLPADSATAPVQ LPAANATDSTATQQSAITPSADMPADDASQADTAAEEGHETSPADAPAQGNATTI
Sequences:
>Translated_695_residues MTQTENTPDAGQHDLHSQTVTPDASTEAAPAAPQRTVCERILDILAFQPLIPLTILLALQTVFMLDARALWYSDEVRYAN VFEHVVNAGKWIVLHLNGVPYPDKPPVYFWLLEGIRQGMQAAGIAGDAPQGIGPRLFFSGAAVSALFYIWATYALARRVA AADKRTALGAGLVLLSVFYFIGVSHYSRMDLLFAALITLSHICLFTGWKKEKSTFWIVCGFAFAALATLTKGPLGLAFPL VTSVLFLLWRGKPRRLAGADVAAGAGVMLFILLAWVMGAYLTEQPDFLYNIFHDQIYRRATHTWHHSQPWWHYMATLPAA WMPWTLLLPVLPFGFLLSKKGARAVAASRTPEKEGMAYLWIAFLNGFAILSAVSIKIIIYLLPLFAPLAVLTAGGILSLS RARAKWLMRLMALLLLALAAALVTLQLGQMFGWEWLTKAVRWPLALEGLWILAAVSAAGAAIMWVAAPAAGGAGALLLAV LFTTVWIQPLGLITAPSMDNVMSPRMQGELIGSYIEKGYTPVTYKVYSGTYTFYAGADLLELDEWADVDAAVSAHRKTVV AMRTKHWDTWENKPADMREVSRQWIVDQEYVVAVRETSSPDQTEVSAGTEVSAQTEVPAESGQTGEHADLPADSATAPVQ LPAANATDSTATQQSAITPSADMPADDASQADTAAEEGHETSPADAPAQGNATTI >Mature_694_residues TQTENTPDAGQHDLHSQTVTPDASTEAAPAAPQRTVCERILDILAFQPLIPLTILLALQTVFMLDARALWYSDEVRYANV FEHVVNAGKWIVLHLNGVPYPDKPPVYFWLLEGIRQGMQAAGIAGDAPQGIGPRLFFSGAAVSALFYIWATYALARRVAA ADKRTALGAGLVLLSVFYFIGVSHYSRMDLLFAALITLSHICLFTGWKKEKSTFWIVCGFAFAALATLTKGPLGLAFPLV TSVLFLLWRGKPRRLAGADVAAGAGVMLFILLAWVMGAYLTEQPDFLYNIFHDQIYRRATHTWHHSQPWWHYMATLPAAW MPWTLLLPVLPFGFLLSKKGARAVAASRTPEKEGMAYLWIAFLNGFAILSAVSIKIIIYLLPLFAPLAVLTAGGILSLSR ARAKWLMRLMALLLLALAAALVTLQLGQMFGWEWLTKAVRWPLALEGLWILAAVSAAGAAIMWVAAPAAGGAGALLLAVL FTTVWIQPLGLITAPSMDNVMSPRMQGELIGSYIEKGYTPVTYKVYSGTYTFYAGADLLELDEWADVDAAVSAHRKTVVA MRTKHWDTWENKPADMREVSRQWIVDQEYVVAVRETSSPDQTEVSAGTEVSAQTEVPAESGQTGEHADLPADSATAPVQL PAANATDSTATQQSAITPSADMPADDASQADTAAEEGHETSPADAPAQGNATTI
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=356, Percent_Identity=28.6516853932584, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 75430; Mature: 75299
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTENTPDAGQHDLHSQTVTPDASTEAAPAAPQRTVCERILDILAFQPLIPLTILLALQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH TVFMLDARALWYSDEVRYANVFEHVVNAGKWIVLHLNGVPYPDKPPVYFWLLEGIRQGMQ HHHHHHHHHHEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH AAGIAGDAPQGIGPRLFFSGAAVSALFYIWATYALARRVAAADKRTALGAGLVLLSVFYF HCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVSHYSRMDLLFAALITLSHICLFTGWKKEKSTFWIVCGFAFAALATLTKGPLGLAFPL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHH VTSVLFLLWRGKPRRLAGADVAAGAGVMLFILLAWVMGAYLTEQPDFLYNIFHDQIYRRA HHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH THTWHHSQPWWHYMATLPAAWMPWTLLLPVLPFGFLLSKKGARAVAASRTPEKEGMAYLW HCCCCCCCCHHHHHHHCCCHHCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHH IAFLNGFAILSAVSIKIIIYLLPLFAPLAVLTAGGILSLSRARAKWLMRLMALLLLALAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALVTLQLGQMFGWEWLTKAVRWPLALEGLWILAAVSAAGAAIMWVAAPAAGGAGALLLAV HHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH LFTTVWIQPLGLITAPSMDNVMSPRMQGELIGSYIEKGYTPVTYKVYSGTYTFYAGADLL HHHHHHHHHHCCEECCCCHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECEEEEEECCCHH ELDEWADVDAAVSAHRKTVVAMRTKHWDTWENKPADMREVSRQWIVDQEYVVAVRETSSP HHHHHCCHHHHHHHHHHHHEEEHHCCCCCCCCCCCHHHHHHHHHCCCCHHEEEEECCCCC DQTEVSAGTEVSAQTEVPAESGQTGEHADLPADSATAPVQLPAANATDSTATQQSAITPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCC ADMPADDASQADTAAEEGHETSPADAPAQGNATTI CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQTENTPDAGQHDLHSQTVTPDASTEAAPAAPQRTVCERILDILAFQPLIPLTILLALQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH TVFMLDARALWYSDEVRYANVFEHVVNAGKWIVLHLNGVPYPDKPPVYFWLLEGIRQGMQ HHHHHHHHHHEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH AAGIAGDAPQGIGPRLFFSGAAVSALFYIWATYALARRVAAADKRTALGAGLVLLSVFYF HCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVSHYSRMDLLFAALITLSHICLFTGWKKEKSTFWIVCGFAFAALATLTKGPLGLAFPL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHH VTSVLFLLWRGKPRRLAGADVAAGAGVMLFILLAWVMGAYLTEQPDFLYNIFHDQIYRRA HHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH THTWHHSQPWWHYMATLPAAWMPWTLLLPVLPFGFLLSKKGARAVAASRTPEKEGMAYLW HCCCCCCCCHHHHHHHCCCHHCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHH IAFLNGFAILSAVSIKIIIYLLPLFAPLAVLTAGGILSLSRARAKWLMRLMALLLLALAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALVTLQLGQMFGWEWLTKAVRWPLALEGLWILAAVSAAGAAIMWVAAPAAGGAGALLLAV HHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH LFTTVWIQPLGLITAPSMDNVMSPRMQGELIGSYIEKGYTPVTYKVYSGTYTFYAGADLL HHHHHHHHHHCCEECCCCHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECEEEEEECCCHH ELDEWADVDAAVSAHRKTVVAMRTKHWDTWENKPADMREVSRQWIVDQEYVVAVRETSSP HHHHHCCHHHHHHHHHHHHEEEHHCCCCCCCCCCCHHHHHHHHHCCCCHHEEEEECCCCC DQTEVSAGTEVSAQTEVPAESGQTGEHADLPADSATAPVQLPAANATDSTATQQSAITPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCC ADMPADDASQADTAAEEGHETSPADAPAQGNATTI CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA