| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357405
Identifier: 78357405
GI number: 78357405
Start: 2383079
End: 2384320
Strand: Direct
Name: 78357405
Synonym: Dde_2362
Alternate gene names: NA
Gene position: 2383079-2384320 (Clockwise)
Preceding gene: 78357404
Following gene: 78357406
Centisome position: 63.89
GC content: 61.19
Gene sequence:
>1242_bases ATGGCTTCCACCTATCCGGTCTGTCTGCTGACCAGAAACCTGCATACCGAAGAAGAGCTTTCGCGCCTCATTGGGCACCA GAAGCACTTTCATCTTGCCACTCCGGGCGTATCCGAAGACATGGGGCTGGTCATAGTGGAACTGGGCGGCACCCCGCAGG ATGACTTTGACGCCATTGTGGCGCTGGCGGCCGACCCGCGTGTGGGCGAAGTGTTCATCACCGCTCCGCGCAAAGACCCC GATGTCATCATCCGCGCCATGCGTGCCGGTGTCACCGGCTTTCTGGAACAACCTTTCAGCAGCGACAACATTGCCGCGGC GCTGGAAGGATACGCCGCGCGCATGCGTGAAACCGAAACCGCACCGCAGCCTGCTGTACAGCGTCAGGGACGCATCATCC ATGTGCTGGGCGCAAAAAGCGGCAGCGGTGCCACGACGGTTACGGTCAATCTGGGCGTGAACAGCGCGCGGAACGGCCGC AGCACCGCGGTGATGGATATGCGCCTGCCGCAGGGCGAGGTTCCGCTTTTTCTGGACATGCAATACGCGCGCACATGGGC AGATGCGGCGCGTGAACTGCACAGACTGGATCATATGTATCTGCAGAGTCTTATGGAACGGCACGAAAGCGGGCTGGAAA TACTGGCCGCGCCGGATGAAAACGATGCGCCCGAAACACTGAGCGAGCGCAGCGTAAGAAGTATTCTGCGCCTGCTGCGC ACCCGCCATGACGCTGTGCTTATCGACGGCGGTCCGTATGCCGATGAACTGGCTCTCGTATCCATGCACGAAGCGGACGA GGTGCTTCTGGTTTCAGAACTGTCACTGCCGGCGCTGGCCGGAGCCCGCAGGCTGCTCAACAGCATTGCACAGACGGCTC CGGATCTGGACGGTAAAATCCGTCTGGTCATCAACAGGCATGCCGCAGGAAGCGGACTGTCGCAGGAAGAAGCCGAAACC CTGCTGGAACGCAAAGCCTGCTGCCTTATTGAAAATGACTACGAAGCGGCCGTCTCCGCGGTCAATCAGGGTGTGGCCCT GTGCGATGCGCACCCGCGTTCGCCCGCGGCAAAATCGCTGACCGCACTGGCAGACATACTCATGCCTCAGGCCTCTCCGG CTGATACCGGTTCCATGCGCCCCAGAAGCCTGCTGGCCAGATTCATGCCGCGTCGTCCTTCCCGCGTGCGGACAACACAG GACGCGCCTTTGTCCGGCAACCTTCAGACCGCGGAGAGCTGA
Upstream 100 bases:
>100_bases AGAAGAAACCATCGGCCTGTACCGCACCCCCGAACAGCCCGCGCAAAAGGCGTCCGGCATCAACCTTAATCTGAACGGTC CCAAATAGCCGGAGGAAATC
Downstream 100 bases:
>100_bases CCATGAAACTGGCAGAACGACTCATGCGCTCCACCCGGCGCACGCCGGCGCCTTTGTCCGGAGTCCCCGTCCGCAGCGAA GACGACGCGCTGGAACAGGC
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Septum Site-Determining Protein; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Pilus Assembly Protein CpaE; Response Regulator Receiver Domain-Containing Protein; Flp Pilus Assembly Protein ATPase; Pilus Assembly Protein; Flp Pilus Assembly Protein ATPase CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like; Response Receiver Involved In Pilum Assembly; Two-Component Response Regulator; Flp Pilus Assembly ATPase; Response Regulator; Pilus Assembly ATPase CpaE; Cobyrinic Acid A C-Diamide Synthase; Flp Pilus Assembly Protein; Response Regulator Receiver; Flp Pilus Assembly Protein CpaE; Flp Pilus Assembly Response Receiver ATPase CpaE; Cobyrinic Acid Ac-Diamide Synthase; Flp Pilus Assembly ATPase CpaE; Fimbriae Assembly Protein; Chromosome Partitioning ATPase; Type II Secretion System Protein; AAA ATPase; MinD Protein; ParaA Family ATPase; Pilus Assembly Protein CpaE-Like Protein; Septum Formation Inhibitor-Activating ATPase- Like Protein; Pilus Assembly Protein CpaE-Like; Flp Pilus Assembly ATPase Cpae-Like
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MASTYPVCLLTRNLHTEEELSRLIGHQKHFHLATPGVSEDMGLVIVELGGTPQDDFDAIVALAADPRVGEVFITAPRKDP DVIIRAMRAGVTGFLEQPFSSDNIAAALEGYAARMRETETAPQPAVQRQGRIIHVLGAKSGSGATTVTVNLGVNSARNGR STAVMDMRLPQGEVPLFLDMQYARTWADAARELHRLDHMYLQSLMERHESGLEILAAPDENDAPETLSERSVRSILRLLR TRHDAVLIDGGPYADELALVSMHEADEVLLVSELSLPALAGARRLLNSIAQTAPDLDGKIRLVINRHAAGSGLSQEEAET LLERKACCLIENDYEAAVSAVNQGVALCDAHPRSPAAKSLTALADILMPQASPADTGSMRPRSLLARFMPRRPSRVRTTQ DAPLSGNLQTAES
Sequences:
>Translated_413_residues MASTYPVCLLTRNLHTEEELSRLIGHQKHFHLATPGVSEDMGLVIVELGGTPQDDFDAIVALAADPRVGEVFITAPRKDP DVIIRAMRAGVTGFLEQPFSSDNIAAALEGYAARMRETETAPQPAVQRQGRIIHVLGAKSGSGATTVTVNLGVNSARNGR STAVMDMRLPQGEVPLFLDMQYARTWADAARELHRLDHMYLQSLMERHESGLEILAAPDENDAPETLSERSVRSILRLLR TRHDAVLIDGGPYADELALVSMHEADEVLLVSELSLPALAGARRLLNSIAQTAPDLDGKIRLVINRHAAGSGLSQEEAET LLERKACCLIENDYEAAVSAVNQGVALCDAHPRSPAAKSLTALADILMPQASPADTGSMRPRSLLARFMPRRPSRVRTTQ DAPLSGNLQTAES >Mature_412_residues ASTYPVCLLTRNLHTEEELSRLIGHQKHFHLATPGVSEDMGLVIVELGGTPQDDFDAIVALAADPRVGEVFITAPRKDPD VIIRAMRAGVTGFLEQPFSSDNIAAALEGYAARMRETETAPQPAVQRQGRIIHVLGAKSGSGATTVTVNLGVNSARNGRS TAVMDMRLPQGEVPLFLDMQYARTWADAARELHRLDHMYLQSLMERHESGLEILAAPDENDAPETLSERSVRSILRLLRT RHDAVLIDGGPYADELALVSMHEADEVLLVSELSLPALAGARRLLNSIAQTAPDLDGKIRLVINRHAAGSGLSQEEAETL LERKACCLIENDYEAAVSAVNQGVALCDAHPRSPAAKSLTALADILMPQASPADTGSMRPRSLLARFMPRRPSRVRTTQD APLSGNLQTAES
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44674; Mature: 44543
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTYPVCLLTRNLHTEEELSRLIGHQKHFHLATPGVSEDMGLVIVELGGTPQDDFDAIV CCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHEE ALAADPRVGEVFITAPRKDPDVIIRAMRAGVTGFLEQPFSSDNIAAALEGYAARMRETET EEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC APQPAVQRQGRIIHVLGAKSGSGATTVTVNLGVNSARNGRSTAVMDMRLPQGEVPLFLDM CCCCHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEH QYARTWADAARELHRLDHMYLQSLMERHESGLEILAAPDENDAPETLSERSVRSILRLLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH TRHDAVLIDGGPYADELALVSMHEADEVLLVSELSLPALAGARRLLNSIAQTAPDLDGKI CCCCEEEECCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEE RLVINRHAAGSGLSQEEAETLLERKACCLIENDYEAAVSAVNQGVALCDAHPRSPAAKSL EEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHCCEEEECCCCCCCHHHHH TALADILMPQASPADTGSMRPRSLLARFMPRRPSRVRTTQDAPLSGNLQTAES HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASTYPVCLLTRNLHTEEELSRLIGHQKHFHLATPGVSEDMGLVIVELGGTPQDDFDAIV CCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHEE ALAADPRVGEVFITAPRKDPDVIIRAMRAGVTGFLEQPFSSDNIAAALEGYAARMRETET EEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC APQPAVQRQGRIIHVLGAKSGSGATTVTVNLGVNSARNGRSTAVMDMRLPQGEVPLFLDM CCCCHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEH QYARTWADAARELHRLDHMYLQSLMERHESGLEILAAPDENDAPETLSERSVRSILRLLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH TRHDAVLIDGGPYADELALVSMHEADEVLLVSELSLPALAGARRLLNSIAQTAPDLDGKI CCCCEEEECCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEE RLVINRHAAGSGLSQEEAETLLERKACCLIENDYEAAVSAVNQGVALCDAHPRSPAAKSL EEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHCCEEEECCCCCCCHHHHH TALADILMPQASPADTGSMRPRSLLARFMPRRPSRVRTTQDAPLSGNLQTAES HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA