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The map label for this gene is dksA [H]

Identifier: 78357388

GI number: 78357388

Start: 2365202

End: 2365600

Strand: Reverse

Name: dksA [H]

Synonym: Dde_2345

Alternate gene names: 78357388

Gene position: 2365600-2365202 (Counterclockwise)

Preceding gene: 304570588

Following gene: 78357387

Centisome position: 63.42

GC content: 54.64

Gene sequence:

>399_bases
GTGGTTTATCTTCCCCGTCGTGCCGAGGAGGGCTACATGAATCAGAAAGATATTGAATACTTCCGTGATCTTTTGAACTC
CATGCTGGAAGAAGCGCAGGAGAAAGGTGACGCGACACTGGAAGATCTGACTGATAATAACGAGGTGTGCGCGGACCCTG
CTGACAGGGCAACCATGGAATCCGACCGCGCATTTACGCTGCGCATCCGTGACCGTGAACGCCGTCTGATCAAAAAAATC
CGGCAGGCGCTGGATCGTATTGAAGACGGTTCGTTCGGCGTGTGCGAAGACTGCGGTGAACAGATTGGTGTTCCCCGCCT
GAAAGCCCGCCCCGTGACCAAGCTGTGCATTAACTGCAAAAGCAAGCAGGAAGAGGACGAAAGCCTGCGGGGCGACTAG

Upstream 100 bases:

>100_bases
CCGAGAAATATTGTGAATGGCTCTTTACTTTTCCGACCCCCATGATTTATGGCAGTGAGCTTGTAATGATCACAGGCAGG
TTATTCGGGACTGTACGCCT

Downstream 100 bases:

>100_bases
GTCCGGCTTTCTGCAGAAGGGCGCATTATGGATGCCCATTTTCTGCGCCGTCTGGTGCTGGAACTGACACCGCTGCTGGC
TGGCGCAAGGGTGGAGAAAA

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MVYLPRRAEEGYMNQKDIEYFRDLLNSMLEEAQEKGDATLEDLTDNNEVCADPADRATMESDRAFTLRIRDRERRLIKKI
RQALDRIEDGSFGVCEDCGEQIGVPRLKARPVTKLCINCKSKQEEDESLRGD

Sequences:

>Translated_132_residues
MVYLPRRAEEGYMNQKDIEYFRDLLNSMLEEAQEKGDATLEDLTDNNEVCADPADRATMESDRAFTLRIRDRERRLIKKI
RQALDRIEDGSFGVCEDCGEQIGVPRLKARPVTKLCINCKSKQEEDESLRGD
>Mature_132_residues
MVYLPRRAEEGYMNQKDIEYFRDLLNSMLEEAQEKGDATLEDLTDNNEVCADPADRATMESDRAFTLRIRDRERRLIKKI
RQALDRIEDGSFGVCEDCGEQIGVPRLKARPVTKLCINCKSKQEEDESLRGD

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=112, Percent_Identity=43.75, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 15260; Mature: 15260

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYLPRRAEEGYMNQKDIEYFRDLLNSMLEEAQEKGDATLEDLTDNNEVCADPADRATME
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHCC
SDRAFTLRIRDRERRLIKKIRQALDRIEDGSFGVCEDCGEQIGVPRLKARPVTKLCINCK
CCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCC
SKQEEDESLRGD
CCCCHHHHCCCC
>Mature Secondary Structure
MVYLPRRAEEGYMNQKDIEYFRDLLNSMLEEAQEKGDATLEDLTDNNEVCADPADRATME
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHCC
SDRAFTLRIRDRERRLIKKIRQALDRIEDGSFGVCEDCGEQIGVPRLKARPVTKLCINCK
CCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHCCC
SKQEEDESLRGD
CCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]