| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is surE
Identifier: 78357383
GI number: 78357383
Start: 2359130
End: 2359909
Strand: Direct
Name: surE
Synonym: Dde_2340
Alternate gene names: 78357383
Gene position: 2359130-2359909 (Clockwise)
Preceding gene: 78357370
Following gene: 78357384
Centisome position: 63.24
GC content: 59.23
Gene sequence:
>780_bases ATGTTCATTGCACTTACCAACGACGACGGCATTCAGGCGCCCGGACTGCGCGCCATGTACAAGGCACTGAAAGAAGCCGG ACACACCGTGCAGGTGGTGGCCCCGGTCACCGAACAGTCGGCCGTGGGACACGCCGTGACCATAGCCCTGCCGCTGAGGG TAAAAATATTTGCAGAAAACGGCTTTCAGGGCATGGGAGTATACGGCACCCCCACGGACTGCGTTAAACTGGGGCTGAAC GCACTGCTGGACAAAAAACCCGACATTGTCGTTTCCGGCATAAACGCAGGTGCCAACGTGGGACCGGACATTCTCTATTC CGGCACGGTATCGGCCGCCACCGAAGCGGCGCACATGGGCTATCCTTCGCTGGCAGTCTCGTACGACAACTTCAAACCGG ACGACATCGCAGCCCATGCCCGCTTCGCTGTCGAAATAATGGAATCCATGCCGTGGCAATCGCTGCCGCCGCGCTGCGTG CTTAACCTGAACCTGCCCGATGTCCCCATGCAGCAATGCAAAGGGCTTACCCTGTGCCCGCAGACAAGAGCTGTCTGGAA AGACTGGTACGATCACCGCACCGACCCGCGGGGCAATTCCTACTGGTGGTTAAACGGTATCATACCTCCGGAAACAGTGG CCGAAGGCACCGACAGAGACATGCTGACCCGCGGATACGCCACGCTGACCCCCCTGCGTTTCGACTTCACCGACAGGGAA ACACTGGCCCGGCTGCAGCAGAATATGGACAGGCAGCGGCAGGGGTCTGAAGACCTTTGA
Upstream 100 bases:
>100_bases CGCCCGGCGCAACAACCGGAAGCCATCCGCCGGCGGGGCACTCCGGCGTTGTGCGCACCGCAAAGCGGACAGTCATCATA CCACCCCGTAGGGAGAATAC
Downstream 100 bases:
>100_bases TTTTCTGCGGCTTGTCGTTTAAAGTGCCCGCGCTTTCATTGACAGGATGGTGTATCCCTCACTAGTGTGAAAGGGATAGA GGCAGATTCGTGGAGTGTCG
Product: exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MFIALTNDDGIQAPGLRAMYKALKEAGHTVQVVAPVTEQSAVGHAVTIALPLRVKIFAENGFQGMGVYGTPTDCVKLGLN ALLDKKPDIVVSGINAGANVGPDILYSGTVSAATEAAHMGYPSLAVSYDNFKPDDIAAHARFAVEIMESMPWQSLPPRCV LNLNLPDVPMQQCKGLTLCPQTRAVWKDWYDHRTDPRGNSYWWLNGIIPPETVAEGTDRDMLTRGYATLTPLRFDFTDRE TLARLQQNMDRQRQGSEDL
Sequences:
>Translated_259_residues MFIALTNDDGIQAPGLRAMYKALKEAGHTVQVVAPVTEQSAVGHAVTIALPLRVKIFAENGFQGMGVYGTPTDCVKLGLN ALLDKKPDIVVSGINAGANVGPDILYSGTVSAATEAAHMGYPSLAVSYDNFKPDDIAAHARFAVEIMESMPWQSLPPRCV LNLNLPDVPMQQCKGLTLCPQTRAVWKDWYDHRTDPRGNSYWWLNGIIPPETVAEGTDRDMLTRGYATLTPLRFDFTDRE TLARLQQNMDRQRQGSEDL >Mature_259_residues MFIALTNDDGIQAPGLRAMYKALKEAGHTVQVVAPVTEQSAVGHAVTIALPLRVKIFAENGFQGMGVYGTPTDCVKLGLN ALLDKKPDIVVSGINAGANVGPDILYSGTVSAATEAAHMGYPSLAVSYDNFKPDDIAAHARFAVEIMESMPWQSLPPRCV LNLNLPDVPMQQCKGLTLCPQTRAVWKDWYDHRTDPRGNSYWWLNGIIPPETVAEGTDRDMLTRGYATLTPLRFDFTDRE TLARLQQNMDRQRQGSEDL
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=240, Percent_Identity=43.3333333333333, Blast_Score=174, Evalue=5e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_DESDG (Q30YV9)
Other databases:
- EMBL: CP000112 - RefSeq: YP_388832.1 - ProteinModelPortal: Q30YV9 - SMR: Q30YV9 - STRING: Q30YV9 - GeneID: 3757351 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_2340 - NMPDR: fig|207559.3.peg.2698 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: IILITND - ProtClustDB: CLSK705613 - BioCyc: DDES207559:DDE_2340-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 28447; Mature: 28447
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIALTNDDGIQAPGLRAMYKALKEAGHTVQVVAPVTEQSAVGHAVTIALPLRVKIFAEN CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEECC GFQGMGVYGTPTDCVKLGLNALLDKKPDIVVSGINAGANVGPDILYSGTVSAATEAAHMG CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHHHCC YPSLAVSYDNFKPDDIAAHARFAVEIMESMPWQSLPPRCVLNLNLPDVPMQQCKGLTLCP CCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHCCCCEECC QTRAVWKDWYDHRTDPRGNSYWWLNGIIPPETVAEGTDRDMLTRGYATLTPLRFDFTDRE CHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHCCCCHHHHHCCCCEECEEEECCCCHH TLARLQQNMDRQRQGSEDL HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFIALTNDDGIQAPGLRAMYKALKEAGHTVQVVAPVTEQSAVGHAVTIALPLRVKIFAEN CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEECC GFQGMGVYGTPTDCVKLGLNALLDKKPDIVVSGINAGANVGPDILYSGTVSAATEAAHMG CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHHHCC YPSLAVSYDNFKPDDIAAHARFAVEIMESMPWQSLPPRCVLNLNLPDVPMQQCKGLTLCP CCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHCCCCEECC QTRAVWKDWYDHRTDPRGNSYWWLNGIIPPETVAEGTDRDMLTRGYATLTPLRFDFTDRE CHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHCCCCHHHHHCCCCEECEEEECCCCHH TLARLQQNMDRQRQGSEDL HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA