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The map label for this gene is yebC [C]

Identifier: 78357368

GI number: 78357368

Start: 2342035

End: 2342781

Strand: Reverse

Name: yebC [C]

Synonym: Dde_2325

Alternate gene names: 78357368

Gene position: 2342781-2342035 (Counterclockwise)

Preceding gene: 78357369

Following gene: 78357367

Centisome position: 62.81

GC content: 56.76

Gene sequence:

>747_bases
ATGGCCGGACATAGTAAATGGAAAAACATCCAGCACCGCAAGGGACGTCAGGACGCCAAAAAATCCAAGGCGTTCACCAA
GGTTGCCAAAGAAATAATCATCGCCGCCAAAGGCGGGGGTGATCCGGTGGCCAACAGCCGTCTGCGTGCGGCCATTGCCG
CGGCTAAAGCGGTGAACCTGCCCAAGGACAAAATTGAGACCGCCATCAAGAAGGGTACCGGCGAACTGGCCGGCGGAGAT
ATTTTTGAACTGGTGTACGAAGGCTACGGCCCCGGCGGCATTGCTTTTCTGATTGAAGTGGCCACCGACAATAAAAACCG
TACCGTGGCTGAAGTGCGCCACATCCTGACCAAATCCGGCGGCTCCATGGGCGAGGCCGGCTGTGTGGGCTGGATGTTTG
ACAAAAAGGGCGTGCTGACTTTCCCCAAGGAAGCCTATTCCGAAGACCAGCTGATGGAAATCGGGCTGGAAGCCGGCTGC
GATGACGTCATCGATGAAGGCGACAGCTGGGCGGTGCATGTGGATCCTTCTTCTTTTGAAGATGTGAAGGCCGCTTTTGA
GCAGGCCGGAGTGACCGCGGAATCGGTGGAACTGGCCAGCGTGCCGCAGAACACCATCGAAGTGGATGCGGAAACCGGCA
AGAAACTGCTGCGTCTGGTGGATGCGCTGGAAGAGAACGACGACGTACAGAACGTGTTTGCCAACTTCGACCTGCCTGAC
GAAGTGCTGGCCGAAATGGAAGACTAG

Upstream 100 bases:

>100_bases
GACCGGAGCGCGCTGCGGCGCGCTGACTGGGGGCTGCCGTTGTGCCTGACACGGCGGGGTGCTCCGGTGGCTGCCGGCAT
TGCCTTTTTAAGGAGGAAGT

Downstream 100 bases:

>100_bases
CCTTTACGGCCGGCCGGAATTCTGTTCCGGCCGGCTTGTTCCGCCGGCATGGCGGGGCAGGGCAGACATACAAGGCGGCC
GGAGCGCAATGACTACGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAGHSKWKNIQHRKGRQDAKKSKAFTKVAKEIIIAAKGGGDPVANSRLRAAIAAAKAVNLPKDKIETAIKKGTGELAGGD
IFELVYEGYGPGGIAFLIEVATDNKNRTVAEVRHILTKSGGSMGEAGCVGWMFDKKGVLTFPKEAYSEDQLMEIGLEAGC
DDVIDEGDSWAVHVDPSSFEDVKAAFEQAGVTAESVELASVPQNTIEVDAETGKKLLRLVDALEENDDVQNVFANFDLPD
EVLAEMED

Sequences:

>Translated_248_residues
MAGHSKWKNIQHRKGRQDAKKSKAFTKVAKEIIIAAKGGGDPVANSRLRAAIAAAKAVNLPKDKIETAIKKGTGELAGGD
IFELVYEGYGPGGIAFLIEVATDNKNRTVAEVRHILTKSGGSMGEAGCVGWMFDKKGVLTFPKEAYSEDQLMEIGLEAGC
DDVIDEGDSWAVHVDPSSFEDVKAAFEQAGVTAESVELASVPQNTIEVDAETGKKLLRLVDALEENDDVQNVFANFDLPD
EVLAEMED
>Mature_247_residues
AGHSKWKNIQHRKGRQDAKKSKAFTKVAKEIIIAAKGGGDPVANSRLRAAIAAAKAVNLPKDKIETAIKKGTGELAGGDI
FELVYEGYGPGGIAFLIEVATDNKNRTVAEVRHILTKSGGSMGEAGCVGWMFDKKGVLTFPKEAYSEDQLMEIGLEAGCD
DVIDEGDSWAVHVDPSSFEDVKAAFEQAGVTAESVELASVPQNTIEVDAETGKKLLRLVDALEENDDVQNVFANFDLPDE
VLAEMED

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=32.9317269076305, Blast_Score=131, Evalue=6e-31,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=47.9838709677419, Blast_Score=231, Evalue=4e-62,
Organism=Escherichia coli, GI1788294, Length=236, Percent_Identity=39.8305084745763, Blast_Score=144, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17556100, Length=250, Percent_Identity=26, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=34.2205323193916, Blast_Score=125, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24583305, Length=247, Percent_Identity=25.5060728744939, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2325_DESDG (Q30YX4)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_388817.1
- ProteinModelPortal:   Q30YX4
- SMR:   Q30YX4
- STRING:   Q30YX4
- GeneID:   3757336
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_2325
- NMPDR:   fig|207559.3.peg.621
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   DDES207559:DDE_2325-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26609; Mature: 26478

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWKNIQHRKGRQDAKKSKAFTKVAKEIIIAAKGGGDPVANSRLRAAIAAAKAVNL
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCC
PKDKIETAIKKGTGELAGGDIFELVYEGYGPGGIAFLIEVATDNKNRTVAEVRHILTKSG
CHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC
GSMGEAGCVGWMFDKKGVLTFPKEAYSEDQLMEIGLEAGCDDVIDEGDSWAVHVDPSSFE
CCCCCCCCEEEEECCCCCEECCHHHCCHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCHH
DVKAAFEQAGVTAESVELASVPQNTIEVDAETGKKLLRLVDALEENDDVQNVFANFDLPD
HHHHHHHHHCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCH
EVLAEMED
HHHHHCCC
>Mature Secondary Structure 
AGHSKWKNIQHRKGRQDAKKSKAFTKVAKEIIIAAKGGGDPVANSRLRAAIAAAKAVNL
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCC
PKDKIETAIKKGTGELAGGDIFELVYEGYGPGGIAFLIEVATDNKNRTVAEVRHILTKSG
CHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC
GSMGEAGCVGWMFDKKGVLTFPKEAYSEDQLMEIGLEAGCDDVIDEGDSWAVHVDPSSFE
CCCCCCCCEEEEECCCCCEECCHHHCCHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCHH
DVKAAFEQAGVTAESVELASVPQNTIEVDAETGKKLLRLVDALEENDDVQNVFANFDLPD
HHHHHHHHHCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCH
EVLAEMED
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA