| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is znuA [C]
Identifier: 78357251
GI number: 78357251
Start: 2249005
End: 2250042
Strand: Direct
Name: znuA [C]
Synonym: Dde_2208
Alternate gene names: 78357251
Gene position: 2249005-2250042 (Clockwise)
Preceding gene: 78357242
Following gene: 78357252
Centisome position: 60.29
GC content: 57.13
Gene sequence:
>1038_bases ATGAACCGCCTGTTTCAGTACGCCGCAACGGCGTTTATAACATTGTTCACGGGGCTTATGCCCCTTGGCGGCACCGCAGC CGCGGCCGACGTTTCCGTGGCTGTCAGCATCATTCCGCAAAAATATCTTATCGAAAAAATCGCAGGAGACACAGCCGATG TCTCGGTGATGGTGCTTCCGGGTGCCAGTCCGGCAACATATGAGCCCCGCCCCGCTCAGCTCGCCGCCCTTGCCGGAGCC GATCTCTACTTTTCCATCGGGGTTCCTTTTGAATCGGCATGGCTTGAGCGCATTCTTTCGGCCAGCAAAGCCATGACACC GGTTGCCATGGATAACGGCATTACCAAACTGCCCATGGCGGAACACCATCACGAAGACGACCGTCATGCCCATAATGCGC ACAGCCACGACGAAGACGGTCACCATGACCACGAGGAACACGGACACCACGAAACGGAACACAGCGACCATGCCGGAATT GCCCCGCATGAACACGGACATGACGAGCACGGGCATGACGAGCACGGGCACGAACACGAAGGAGGCAGCGATCCCCATGT ATGGCTTTCGCCTGCCAATATGAAGGTAATGGCACGCACCGCGACAGAAGCTCTCATCAGAACAGCGCCTCAGCATGCGC AGCTCTACCGTGCCAATCTGGCTGCTTTTGAGCAGGAAGCCGATGCACTCGACACGAAACTGCGCGCCATTTTCGCCTCC ACTCCGTCAGACAGAAGAGCCTTCATGGTTTTCCACCCTTCGTGGGGATATTTTGCCGCCGATTACGGGCTGCACCAGAT TCCCATCGAACTGCAGGGCAAGGAACCGAGCCCCCGCACCTTGCGTGAACTCATAGAGACAGCGCAGGAAAAAAATATCC GCGTCGTTTTCGCTGCACCGCAGTTTTCTCAGAAAAGTGCAGCTGTCATCGCCCGCAGCATAGGCGGTACCGTAGTCACG GCAGACCCGCTGGCTGCAGACTGGGCTGACAACCTCATCAGTGTGGCAGAAGCTTTTGCAGCCTCATTCGGTAACTGA
Upstream 100 bases:
>100_bases CGCATTTTATCCGCAGGGATGCGTTGACAGAAAGCCTGTGCAGCCACATACTATGCAACTGAGTTGCATTCTCATAACCC TATCACCGGCAGGAGTCAGT
Downstream 100 bases:
>100_bases AATGACGCAACCTGTCATAGATGTGAACGCTGTCAGCTTCAGCTACGACAGCCGCACAGCTTACGGTGACCGGGGGCTGG CACTGGACAACGTCTCGCTG
Product: cation ABC transporter periplasmc-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MNRLFQYAATAFITLFTGLMPLGGTAAAADVSVAVSIIPQKYLIEKIAGDTADVSVMVLPGASPATYEPRPAQLAALAGA DLYFSIGVPFESAWLERILSASKAMTPVAMDNGITKLPMAEHHHEDDRHAHNAHSHDEDGHHDHEEHGHHETEHSDHAGI APHEHGHDEHGHDEHGHEHEGGSDPHVWLSPANMKVMARTATEALIRTAPQHAQLYRANLAAFEQEADALDTKLRAIFAS TPSDRRAFMVFHPSWGYFAADYGLHQIPIELQGKEPSPRTLRELIETAQEKNIRVVFAAPQFSQKSAAVIARSIGGTVVT ADPLAADWADNLISVAEAFAASFGN
Sequences:
>Translated_345_residues MNRLFQYAATAFITLFTGLMPLGGTAAAADVSVAVSIIPQKYLIEKIAGDTADVSVMVLPGASPATYEPRPAQLAALAGA DLYFSIGVPFESAWLERILSASKAMTPVAMDNGITKLPMAEHHHEDDRHAHNAHSHDEDGHHDHEEHGHHETEHSDHAGI APHEHGHDEHGHDEHGHEHEGGSDPHVWLSPANMKVMARTATEALIRTAPQHAQLYRANLAAFEQEADALDTKLRAIFAS TPSDRRAFMVFHPSWGYFAADYGLHQIPIELQGKEPSPRTLRELIETAQEKNIRVVFAAPQFSQKSAAVIARSIGGTVVT ADPLAADWADNLISVAEAFAASFGN >Mature_345_residues MNRLFQYAATAFITLFTGLMPLGGTAAAADVSVAVSIIPQKYLIEKIAGDTADVSVMVLPGASPATYEPRPAQLAALAGA DLYFSIGVPFESAWLERILSASKAMTPVAMDNGITKLPMAEHHHEDDRHAHNAHSHDEDGHHDHEEHGHHETEHSDHAGI APHEHGHDEHGHDEHGHEHEGGSDPHVWLSPANMKVMARTATEALIRTAPQHAQLYRANLAAFEQEADALDTKLRAIFAS TPSDRRAFMVFHPSWGYFAADYGLHQIPIELQGKEPSPRTLRELIETAQEKNIRVVFAAPQFSQKSAAVIARSIGGTVVT ADPLAADWADNLISVAEAFAASFGN
Specific function: Part of an ATP-driven transport system CT_415/CT_416/CT_417 for a metal. Metal-binding component [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=331, Percent_Identity=25.6797583081571, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 37421; Mature: 37421
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLFQYAATAFITLFTGLMPLGGTAAAADVSVAVSIIPQKYLIEKIAGDTADVSVMVLP CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCHHHHHHHHCCCCCCEEEEEEC GASPATYEPRPAQLAALAGADLYFSIGVPFESAWLERILSASKAMTPVAMDNGITKLPMA CCCCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCH EHHHEDDRHAHNAHSHDEDGHHDHEEHGHHETEHSDHAGIAPHEHGHDEHGHDEHGHEHE HHCCCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSDPHVWLSPANMKVMARTATEALIRTAPQHAQLYRANLAAFEQEADALDTKLRAIFAS CCCCCEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPSDRRAFMVFHPSWGYFAADYGLHQIPIELQGKEPSPRTLRELIETAQEKNIRVVFAAP CCCCCEEEEEECCCCCCEECCCCCEECCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECC QFSQKSAAVIARSIGGTVVTADPLAADWADNLISVAEAFAASFGN CCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRLFQYAATAFITLFTGLMPLGGTAAAADVSVAVSIIPQKYLIEKIAGDTADVSVMVLP CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCHHHHHHHHCCCCCCEEEEEEC GASPATYEPRPAQLAALAGADLYFSIGVPFESAWLERILSASKAMTPVAMDNGITKLPMA CCCCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCH EHHHEDDRHAHNAHSHDEDGHHDHEEHGHHETEHSDHAGIAPHEHGHDEHGHDEHGHEHE HHCCCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSDPHVWLSPANMKVMARTATEALIRTAPQHAQLYRANLAAFEQEADALDTKLRAIFAS CCCCCEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPSDRRAFMVFHPSWGYFAADYGLHQIPIELQGKEPSPRTLRELIETAQEKNIRVVFAAP CCCCCEEEEEECCCCCCEECCCCCEECCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECC QFSQKSAAVIARSIGGTVVTADPLAADWADNLISVAEAFAASFGN CCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]