Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is znuA [C]

Identifier: 78357251

GI number: 78357251

Start: 2249005

End: 2250042

Strand: Direct

Name: znuA [C]

Synonym: Dde_2208

Alternate gene names: 78357251

Gene position: 2249005-2250042 (Clockwise)

Preceding gene: 78357242

Following gene: 78357252

Centisome position: 60.29

GC content: 57.13

Gene sequence:

>1038_bases
ATGAACCGCCTGTTTCAGTACGCCGCAACGGCGTTTATAACATTGTTCACGGGGCTTATGCCCCTTGGCGGCACCGCAGC
CGCGGCCGACGTTTCCGTGGCTGTCAGCATCATTCCGCAAAAATATCTTATCGAAAAAATCGCAGGAGACACAGCCGATG
TCTCGGTGATGGTGCTTCCGGGTGCCAGTCCGGCAACATATGAGCCCCGCCCCGCTCAGCTCGCCGCCCTTGCCGGAGCC
GATCTCTACTTTTCCATCGGGGTTCCTTTTGAATCGGCATGGCTTGAGCGCATTCTTTCGGCCAGCAAAGCCATGACACC
GGTTGCCATGGATAACGGCATTACCAAACTGCCCATGGCGGAACACCATCACGAAGACGACCGTCATGCCCATAATGCGC
ACAGCCACGACGAAGACGGTCACCATGACCACGAGGAACACGGACACCACGAAACGGAACACAGCGACCATGCCGGAATT
GCCCCGCATGAACACGGACATGACGAGCACGGGCATGACGAGCACGGGCACGAACACGAAGGAGGCAGCGATCCCCATGT
ATGGCTTTCGCCTGCCAATATGAAGGTAATGGCACGCACCGCGACAGAAGCTCTCATCAGAACAGCGCCTCAGCATGCGC
AGCTCTACCGTGCCAATCTGGCTGCTTTTGAGCAGGAAGCCGATGCACTCGACACGAAACTGCGCGCCATTTTCGCCTCC
ACTCCGTCAGACAGAAGAGCCTTCATGGTTTTCCACCCTTCGTGGGGATATTTTGCCGCCGATTACGGGCTGCACCAGAT
TCCCATCGAACTGCAGGGCAAGGAACCGAGCCCCCGCACCTTGCGTGAACTCATAGAGACAGCGCAGGAAAAAAATATCC
GCGTCGTTTTCGCTGCACCGCAGTTTTCTCAGAAAAGTGCAGCTGTCATCGCCCGCAGCATAGGCGGTACCGTAGTCACG
GCAGACCCGCTGGCTGCAGACTGGGCTGACAACCTCATCAGTGTGGCAGAAGCTTTTGCAGCCTCATTCGGTAACTGA

Upstream 100 bases:

>100_bases
CGCATTTTATCCGCAGGGATGCGTTGACAGAAAGCCTGTGCAGCCACATACTATGCAACTGAGTTGCATTCTCATAACCC
TATCACCGGCAGGAGTCAGT

Downstream 100 bases:

>100_bases
AATGACGCAACCTGTCATAGATGTGAACGCTGTCAGCTTCAGCTACGACAGCCGCACAGCTTACGGTGACCGGGGGCTGG
CACTGGACAACGTCTCGCTG

Product: cation ABC transporter periplasmc-binding protein

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNRLFQYAATAFITLFTGLMPLGGTAAAADVSVAVSIIPQKYLIEKIAGDTADVSVMVLPGASPATYEPRPAQLAALAGA
DLYFSIGVPFESAWLERILSASKAMTPVAMDNGITKLPMAEHHHEDDRHAHNAHSHDEDGHHDHEEHGHHETEHSDHAGI
APHEHGHDEHGHDEHGHEHEGGSDPHVWLSPANMKVMARTATEALIRTAPQHAQLYRANLAAFEQEADALDTKLRAIFAS
TPSDRRAFMVFHPSWGYFAADYGLHQIPIELQGKEPSPRTLRELIETAQEKNIRVVFAAPQFSQKSAAVIARSIGGTVVT
ADPLAADWADNLISVAEAFAASFGN

Sequences:

>Translated_345_residues
MNRLFQYAATAFITLFTGLMPLGGTAAAADVSVAVSIIPQKYLIEKIAGDTADVSVMVLPGASPATYEPRPAQLAALAGA
DLYFSIGVPFESAWLERILSASKAMTPVAMDNGITKLPMAEHHHEDDRHAHNAHSHDEDGHHDHEEHGHHETEHSDHAGI
APHEHGHDEHGHDEHGHEHEGGSDPHVWLSPANMKVMARTATEALIRTAPQHAQLYRANLAAFEQEADALDTKLRAIFAS
TPSDRRAFMVFHPSWGYFAADYGLHQIPIELQGKEPSPRTLRELIETAQEKNIRVVFAAPQFSQKSAAVIARSIGGTVVT
ADPLAADWADNLISVAEAFAASFGN
>Mature_345_residues
MNRLFQYAATAFITLFTGLMPLGGTAAAADVSVAVSIIPQKYLIEKIAGDTADVSVMVLPGASPATYEPRPAQLAALAGA
DLYFSIGVPFESAWLERILSASKAMTPVAMDNGITKLPMAEHHHEDDRHAHNAHSHDEDGHHDHEEHGHHETEHSDHAGI
APHEHGHDEHGHDEHGHEHEGGSDPHVWLSPANMKVMARTATEALIRTAPQHAQLYRANLAAFEQEADALDTKLRAIFAS
TPSDRRAFMVFHPSWGYFAADYGLHQIPIELQGKEPSPRTLRELIETAQEKNIRVVFAAPQFSQKSAAVIARSIGGTVVT
ADPLAADWADNLISVAEAFAASFGN

Specific function: Part of an ATP-driven transport system CT_415/CT_416/CT_417 for a metal. Metal-binding component [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family [H]

Homologues:

Organism=Escherichia coli, GI87081990, Length=331, Percent_Identity=25.6797583081571, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 37421; Mature: 37421

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLFQYAATAFITLFTGLMPLGGTAAAADVSVAVSIIPQKYLIEKIAGDTADVSVMVLP
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCHHHHHHHHCCCCCCEEEEEEC
GASPATYEPRPAQLAALAGADLYFSIGVPFESAWLERILSASKAMTPVAMDNGITKLPMA
CCCCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCH
EHHHEDDRHAHNAHSHDEDGHHDHEEHGHHETEHSDHAGIAPHEHGHDEHGHDEHGHEHE
HHCCCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGSDPHVWLSPANMKVMARTATEALIRTAPQHAQLYRANLAAFEQEADALDTKLRAIFAS
CCCCCEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPSDRRAFMVFHPSWGYFAADYGLHQIPIELQGKEPSPRTLRELIETAQEKNIRVVFAAP
CCCCCEEEEEECCCCCCEECCCCCEECCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECC
QFSQKSAAVIARSIGGTVVTADPLAADWADNLISVAEAFAASFGN
CCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRLFQYAATAFITLFTGLMPLGGTAAAADVSVAVSIIPQKYLIEKIAGDTADVSVMVLP
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCHHHHHHHHCCCCCCEEEEEEC
GASPATYEPRPAQLAALAGADLYFSIGVPFESAWLERILSASKAMTPVAMDNGITKLPMA
CCCCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCH
EHHHEDDRHAHNAHSHDEDGHHDHEEHGHHETEHSDHAGIAPHEHGHDEHGHDEHGHEHE
HHCCCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGSDPHVWLSPANMKVMARTATEALIRTAPQHAQLYRANLAAFEQEADALDTKLRAIFAS
CCCCCEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPSDRRAFMVFHPSWGYFAADYGLHQIPIELQGKEPSPRTLRELIETAQEKNIRVVFAAP
CCCCCEEEEEECCCCCCEECCCCCEECCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECC
QFSQKSAAVIARSIGGTVVTADPLAADWADNLISVAEAFAASFGN
CCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]