| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is pgsA [H]
Identifier: 78357117
GI number: 78357117
Start: 2116304
End: 2116855
Strand: Reverse
Name: pgsA [H]
Synonym: Dde_2074
Alternate gene names: 78357117
Gene position: 2116855-2116304 (Counterclockwise)
Preceding gene: 78357118
Following gene: 78357116
Centisome position: 56.75
GC content: 51.81
Gene sequence:
>552_bases ATGCTTACCTTGGCAAATAAAATCACGCTGTTCCGTATTGTCATTGTGCCCCTGATTGTTGTTTTTCTGTATTTTCCCGG TCGGATAACCTGTCTGCTGGCCATGCTGGGTTTCATACTTGCCGCGCTTTCAGACATGGTGGACGGGCACATTGCAAGAC GCTCCAACACGGTGACCAGCTTTGGTAAATTTCTTGATCCGCTGGCGGACAAGCTGCTTATCAGTTCGGTACTTGTCATG CTGTCCGCGCTGGGCTGGGTGCCTGCATGGGTTGTTATTGTCATTATCTGCCGCGAGCTTATGGTTACAGGGCTGCGCGC CATTGCCGCAGACGAAGGCGTGGTCATTGCCGCCGATAAATTCGGCAAGATGAAAACCGTGCTTCAGATGCTGGCTTTGA CCCCGCTGCTTCTGCATTACCCGTGGTTCGGATTCGACCCTAACCCCGCGGGACAGTTTCTGCTTTACATGGCGTTGATT CTCACGGTATTTTCTGGTGGAAACTACCTGTATGCGTTTTATAAAAACTGGCGCACGGCGGATGCCGGTTAA
Upstream 100 bases:
>100_bases GCTGTTTTATGCCGCCCGCTGCGGGTCGCCAGTTCTGTTTTTTTGCTGTATAGCTTTTTTGTGCCAATATATTGTAATGT GACATGGGGGTCAGTTTCCG
Downstream 100 bases:
>100_bases TAGCCGGCAGGCGCGGTTTTCCGCGTTGTTCAGAGGCTGCAGGTTCTCAGGAGAGTGATCGTGCAGGAACATGACGAATT GCAGAGCCGCTTGCGGAACT
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MLTLANKITLFRIVIVPLIVVFLYFPGRITCLLAMLGFILAALSDMVDGHIARRSNTVTSFGKFLDPLADKLLISSVLVM LSALGWVPAWVVIVIICRELMVTGLRAIAADEGVVIAADKFGKMKTVLQMLALTPLLLHYPWFGFDPNPAGQFLLYMALI LTVFSGGNYLYAFYKNWRTADAG
Sequences:
>Translated_183_residues MLTLANKITLFRIVIVPLIVVFLYFPGRITCLLAMLGFILAALSDMVDGHIARRSNTVTSFGKFLDPLADKLLISSVLVM LSALGWVPAWVVIVIICRELMVTGLRAIAADEGVVIAADKFGKMKTVLQMLALTPLLLHYPWFGFDPNPAGQFLLYMALI LTVFSGGNYLYAFYKNWRTADAG >Mature_183_residues MLTLANKITLFRIVIVPLIVVFLYFPGRITCLLAMLGFILAALSDMVDGHIARRSNTVTSFGKFLDPLADKLLISSVLVM LSALGWVPAWVVIVIICRELMVTGLRAIAADEGVVIAADKFGKMKTVLQMLALTPLLLHYPWFGFDPNPAGQFLLYMALI LTVFSGGNYLYAFYKNWRTADAG
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=174, Percent_Identity=36.2068965517241, Blast_Score=95, Evalue=2e-21, Organism=Drosophila melanogaster, GI24650130, Length=105, Percent_Identity=34.2857142857143, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24650126, Length=105, Percent_Identity=34.2857142857143, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24650128, Length=105, Percent_Identity=34.2857142857143, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20189; Mature: 20189
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLANKITLFRIVIVPLIVVFLYFPGRITCLLAMLGFILAALSDMVDGHIARRSNTVTS CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH FGKFLDPLADKLLISSVLVMLSALGWVPAWVVIVIICRELMVTGLRAIAADEGVVIAADK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH FGKMKTVLQMLALTPLLLHYPWFGFDPNPAGQFLLYMALILTVFSGGNYLYAFYKNWRTA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC DAG CCC >Mature Secondary Structure MLTLANKITLFRIVIVPLIVVFLYFPGRITCLLAMLGFILAALSDMVDGHIARRSNTVTS CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH FGKFLDPLADKLLISSVLVMLSALGWVPAWVVIVIICRELMVTGLRAIAADEGVVIAADK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH FGKMKTVLQMLALTPLLLHYPWFGFDPNPAGQFLLYMALILTVFSGGNYLYAFYKNWRTA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC DAG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7750561; 9384377 [H]