| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is fusA
Identifier: 78357106
GI number: 78357106
Start: 2106035
End: 2108077
Strand: Reverse
Name: fusA
Synonym: Dde_2063
Alternate gene names: 78357106
Gene position: 2108077-2106035 (Counterclockwise)
Preceding gene: 78357107
Following gene: 78357105
Centisome position: 56.51
GC content: 55.9
Gene sequence:
>2043_bases ATGACAGCCAAATCTCATTCTGATGAGTACATGAAGTCTTTGCGCAATATCGGGGTCATTGCCCATATCGATGCGGGAAA AACTACTCTTACTGAACGTTTTTTGTATTATTCAGAAAAGATACACAGAATGGGAGAGGTGCATGACGGCACTGCCACCA TGGATTACCTGCCCGAAGAGCAGGAACGCGGAATCACCATTACGTCAGCTTGTACTACCTGCCGTTGGAAAGACCACGAT ATTAACATCATAGACACCCCGGGGCATGTCGATTTCACCATTGAGGTGGAACGCTCGTTGCGCGTTCTTGACGGCGCGGT GGGCGTTTTCTGCGCCGTTGGCGGCGTTGAACCGCAGTCGGAGACCGTCTGGCGGCAGTCTCAGCGTTTCAACGTGCCCA AGCTGGCATTTATTAACAAAATGGACAGAGTCGGCGCGGATTTTGAGCGCGTGCTGGGCGATATCCGTTCCAGACTCAAA GCCAACGCCGTGGCAGTGCAGATTCCCGTAGGACAGGGAGAAACGTTTGAGGCCGTCATTGATCTTGTACACATGCGGCG CATCGATTTTGATGCTTCTGATTACGGAAAAACATATTCTTTTTCAGATCTTTCAGAGCAGGAACTGTCGCTTGCAGAAT CATGGCGCGAGCGTCTGATCGAGGCGTTGGCAGATTTTGACGACGGGCTTCTTGCGGCGTATCTCTCCGGAGAGGCTGTT TGTGCAGACCAGCTTGAAGCACACCTGCGCACGGCTACGCTGGAGCATGGTCTGGTTCCTGTTTTTGCCGGCTCTGCCCT GCGTAATGTGGGTGTCCAGCCTGTGATGGATGCTGTGTGCAGGTACCTTCCGGGACCTGCTGATGTGCCCGCTCCGGCCG GAGTAACTGAAAACGGAAACATTCAGCTGGCCATTACTCCTGATGCTCCGCTTGCCGCACTGGTTTTTAAGGTCATCATG GAAGGGTCGCGCGCTGTTGCGCTTATACGGCTGTATTCCGGTGTGCTGCACGAAGGGACCGCGTGCTGGAACAGCAGCCG TCAGTGTTTTGAAAAGGCTGCCCAGCTTTTCCGGCTGCATGCGGGGCGCAGAGAGCGTATGGAACAGGCGCGTGCCGGGG AAATTGTAGGCGTTGTGGGGTTTAAGCAGGCCCGCACCGGCGATACGCTGACGGATAAAGGCTCGCCGGTCGTGCTCGAA AACATCCAGCAGTACCGCCCTGTTATTTCATTGGCTCTGGAACCCCGTAATGCTGAAGAAGCTGAAAAGCTGGACGATGT GCTTTCGCGCGTGCTGGTGGAAGACCCCACCCTTACACTTGAACATGACGAAGACTCCGGACAGCGGGTGCTTTCGGGCA TGGGCGAACTGCATCTGGAGGTGGTGCTCGAGCGGTTGCGCCGCGAATATGGTGTGTCTCCCCGTTCCGGAAATCCTCAG GTTGTCTATCAGGAAACGGTACGCATGACCGCGGAAGCGGAAGCTGAATTTGACCGTGAACTGGGTGATACCCGTCTGTA CGGGCACGTGGCGGTACGTCTAGAACCGCTGGAACGGGATGCCGGTGTGGATGTGCAGACGGCGGTAGATGACGAGACAA TTCCTGAAAGCTGGATAGCCGAAGCTGTGCAGGGAGTGAAGGACTGTCTGTTGAGCGGAGTGGTCAAAGGCTTTCCCGTA CAGGATGTCAGGGTGACAGTTACGGCTCTGTACCGCACAGACGGGGTCTCTTCCGCCGCCGGGTACCGCATGGCTGCCGT GGCTGCCGTGAAGGCGGCGCTGGAAAAAGCCGGTCCGGTTCTTCTTGAGCCCATAATGACAGTGGAAATTTCTGTACCCG CAGAGTTTGTCGGCGAAGCCATCAGCCTGATGGGTGCCAAAGGGGGGCGTGTGGAAGAAATGCTTGACCAGAGCGGCGTT AAAATCGTGCGCGGCATAGCCCCCATGCGGATGCTTTTCGGTTTCACCACGCAGTTGCGCAGCGCGACACAGGGGCGTGC GGCCCTTGTGCTCACCTTTAACCGTTTTGACATGCTGCAGTAA
Upstream 100 bases:
>100_bases GCTTTCCCGCGCTTTTTTTACTGAGCAATCTGTTTCTTTCACCGGGTAATGTTCTGTCTCTTTTTCCATCGCATGATTAA CAGCAGGTCTGGTACCGAGT
Downstream 100 bases:
>100_bases CCGTTGGTGTGTATATCACTTTGCGGAGGAAAAAAGATCCGTGCATTGGTGGGCTTCTTTCAGGCGCCTGTTGCGTTTTC AATACCTCAGGCTGCTGCGC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G 2 [H]
Number of amino acids: Translated: 680; Mature: 679
Protein sequence:
>680_residues MTAKSHSDEYMKSLRNIGVIAHIDAGKTTLTERFLYYSEKIHRMGEVHDGTATMDYLPEEQERGITITSACTTCRWKDHD INIIDTPGHVDFTIEVERSLRVLDGAVGVFCAVGGVEPQSETVWRQSQRFNVPKLAFINKMDRVGADFERVLGDIRSRLK ANAVAVQIPVGQGETFEAVIDLVHMRRIDFDASDYGKTYSFSDLSEQELSLAESWRERLIEALADFDDGLLAAYLSGEAV CADQLEAHLRTATLEHGLVPVFAGSALRNVGVQPVMDAVCRYLPGPADVPAPAGVTENGNIQLAITPDAPLAALVFKVIM EGSRAVALIRLYSGVLHEGTACWNSSRQCFEKAAQLFRLHAGRRERMEQARAGEIVGVVGFKQARTGDTLTDKGSPVVLE NIQQYRPVISLALEPRNAEEAEKLDDVLSRVLVEDPTLTLEHDEDSGQRVLSGMGELHLEVVLERLRREYGVSPRSGNPQ VVYQETVRMTAEAEAEFDRELGDTRLYGHVAVRLEPLERDAGVDVQTAVDDETIPESWIAEAVQGVKDCLLSGVVKGFPV QDVRVTVTALYRTDGVSSAAGYRMAAVAAVKAALEKAGPVLLEPIMTVEISVPAEFVGEAISLMGAKGGRVEEMLDQSGV KIVRGIAPMRMLFGFTTQLRSATQGRAALVLTFNRFDMLQ
Sequences:
>Translated_680_residues MTAKSHSDEYMKSLRNIGVIAHIDAGKTTLTERFLYYSEKIHRMGEVHDGTATMDYLPEEQERGITITSACTTCRWKDHD INIIDTPGHVDFTIEVERSLRVLDGAVGVFCAVGGVEPQSETVWRQSQRFNVPKLAFINKMDRVGADFERVLGDIRSRLK ANAVAVQIPVGQGETFEAVIDLVHMRRIDFDASDYGKTYSFSDLSEQELSLAESWRERLIEALADFDDGLLAAYLSGEAV CADQLEAHLRTATLEHGLVPVFAGSALRNVGVQPVMDAVCRYLPGPADVPAPAGVTENGNIQLAITPDAPLAALVFKVIM EGSRAVALIRLYSGVLHEGTACWNSSRQCFEKAAQLFRLHAGRRERMEQARAGEIVGVVGFKQARTGDTLTDKGSPVVLE NIQQYRPVISLALEPRNAEEAEKLDDVLSRVLVEDPTLTLEHDEDSGQRVLSGMGELHLEVVLERLRREYGVSPRSGNPQ VVYQETVRMTAEAEAEFDRELGDTRLYGHVAVRLEPLERDAGVDVQTAVDDETIPESWIAEAVQGVKDCLLSGVVKGFPV QDVRVTVTALYRTDGVSSAAGYRMAAVAAVKAALEKAGPVLLEPIMTVEISVPAEFVGEAISLMGAKGGRVEEMLDQSGV KIVRGIAPMRMLFGFTTQLRSATQGRAALVLTFNRFDMLQ >Mature_679_residues TAKSHSDEYMKSLRNIGVIAHIDAGKTTLTERFLYYSEKIHRMGEVHDGTATMDYLPEEQERGITITSACTTCRWKDHDI NIIDTPGHVDFTIEVERSLRVLDGAVGVFCAVGGVEPQSETVWRQSQRFNVPKLAFINKMDRVGADFERVLGDIRSRLKA NAVAVQIPVGQGETFEAVIDLVHMRRIDFDASDYGKTYSFSDLSEQELSLAESWRERLIEALADFDDGLLAAYLSGEAVC ADQLEAHLRTATLEHGLVPVFAGSALRNVGVQPVMDAVCRYLPGPADVPAPAGVTENGNIQLAITPDAPLAALVFKVIME GSRAVALIRLYSGVLHEGTACWNSSRQCFEKAAQLFRLHAGRRERMEQARAGEIVGVVGFKQARTGDTLTDKGSPVVLEN IQQYRPVISLALEPRNAEEAEKLDDVLSRVLVEDPTLTLEHDEDSGQRVLSGMGELHLEVVLERLRREYGVSPRSGNPQV VYQETVRMTAEAEAEFDRELGDTRLYGHVAVRLEPLERDAGVDVQTAVDDETIPESWIAEAVQGVKDCLLSGVVKGFPVQ DVRVTVTALYRTDGVSSAAGYRMAAVAAVKAALEKAGPVLLEPIMTVEISVPAEFVGEAISLMGAKGGRVEEMLDQSGVK IVRGIAPMRMLFGFTTQLRSATQGRAALVLTFNRFDMLQ
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=686, Percent_Identity=38.9212827988338, Blast_Score=443, Evalue=1e-124, Organism=Homo sapiens, GI19923640, Length=709, Percent_Identity=35.4019746121298, Blast_Score=411, Evalue=1e-114, Organism=Homo sapiens, GI25306287, Length=708, Percent_Identity=33.4745762711864, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI25306283, Length=391, Percent_Identity=41.1764705882353, Blast_Score=280, Evalue=4e-75, Organism=Homo sapiens, GI4503483, Length=464, Percent_Identity=25.8620689655172, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI94966754, Length=152, Percent_Identity=36.8421052631579, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI157426893, Length=149, Percent_Identity=34.8993288590604, Blast_Score=91, Evalue=5e-18, Organism=Homo sapiens, GI310132016, Length=119, Percent_Identity=38.655462184874, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI310110807, Length=119, Percent_Identity=38.655462184874, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI310123363, Length=119, Percent_Identity=38.655462184874, Blast_Score=76, Evalue=1e-13, Organism=Escherichia coli, GI1789738, Length=679, Percent_Identity=42.5625920471281, Blast_Score=566, Evalue=1e-162, Organism=Escherichia coli, GI1790835, Length=495, Percent_Identity=25.2525252525253, Blast_Score=139, Evalue=6e-34, Organism=Escherichia coli, GI48994988, Length=177, Percent_Identity=35.5932203389831, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1788922, Length=153, Percent_Identity=39.2156862745098, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI1789737, Length=135, Percent_Identity=31.8518518518519, Blast_Score=62, Evalue=9e-11, Organism=Escherichia coli, GI1790412, Length=135, Percent_Identity=31.8518518518519, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17533571, Length=683, Percent_Identity=34.8462664714495, Blast_Score=394, Evalue=1e-110, Organism=Caenorhabditis elegans, GI17556745, Length=632, Percent_Identity=30.5379746835443, Blast_Score=281, Evalue=8e-76, Organism=Caenorhabditis elegans, GI17557151, Length=178, Percent_Identity=35.3932584269663, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17506493, Length=438, Percent_Identity=26.2557077625571, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71988819, Length=138, Percent_Identity=34.0579710144928, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71988811, Length=138, Percent_Identity=34.0579710144928, Blast_Score=74, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=675, Percent_Identity=37.037037037037, Blast_Score=441, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6322359, Length=777, Percent_Identity=29.98712998713, Blast_Score=321, Evalue=2e-88, Organism=Saccharomyces cerevisiae, GI6324707, Length=437, Percent_Identity=25.4004576659039, Blast_Score=100, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6320593, Length=437, Percent_Identity=25.4004576659039, Blast_Score=100, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6323320, Length=151, Percent_Identity=32.4503311258278, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6324166, Length=147, Percent_Identity=34.0136054421769, Blast_Score=75, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324761, Length=135, Percent_Identity=31.8518518518519, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI24582462, Length=688, Percent_Identity=35.1744186046512, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI221458488, Length=704, Percent_Identity=32.1022727272727, Blast_Score=331, Evalue=9e-91, Organism=Drosophila melanogaster, GI24585711, Length=438, Percent_Identity=26.2557077625571, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24585713, Length=438, Percent_Identity=26.2557077625571, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24585709, Length=438, Percent_Identity=26.2557077625571, Blast_Score=103, Evalue=4e-22, Organism=Drosophila melanogaster, GI78706572, Length=192, Percent_Identity=33.8541666666667, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI28574573, Length=143, Percent_Identity=36.3636363636364, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 74529; Mature: 74398
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKSHSDEYMKSLRNIGVIAHIDAGKTTLTERFLYYSEKIHRMGEVHDGTATMDYLPEE CCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCH QERGITITSACTTCRWKDHDINIIDTPGHVDFTIEVERSLRVLDGAVGVFCAVGGVEPQS HHCCEEEEECCCCCEECCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHEECCCCCCH ETVWRQSQRFNVPKLAFINKMDRVGADFERVLGDIRSRLKANAVAVQIPVGQGETFEAVI HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHH DLVHMRRIDFDASDYGKTYSFSDLSEQELSLAESWRERLIEALADFDDGLLAAYLSGEAV HHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCHH CADQLEAHLRTATLEHGLVPVFAGSALRNVGVQPVMDAVCRYLPGPADVPAPAGVTENGN HHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC IQLAITPDAPLAALVFKVIMEGSRAVALIRLYSGVLHEGTACWNSSRQCFEKAAQLFRLH EEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH AGRRERMEQARAGEIVGVVGFKQARTGDTLTDKGSPVVLENIQQYRPVISLALEPRNAEE CCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCHHHEEEECCCCCHH AEKLDDVLSRVLVEDPTLTLEHDEDSGQRVLSGMGELHLEVVLERLRREYGVSPRSGNPQ HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VVYQETVRMTAEAEAEFDRELGDTRLYGHVAVRLEPLERDAGVDVQTAVDDETIPESWIA EEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCCCCHHHHH EAVQGVKDCLLSGVVKGFPVQDVRVTVTALYRTDGVSSAAGYRMAAVAAVKAALEKAGPV HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCE LLEPIMTVEISVPAEFVGEAISLMGAKGGRVEEMLDQSGVKIVRGIAPMRMLFGFTTQLR EECCEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH SATQGRAALVLTFNRFDMLQ HCCCCCEEEEEEECCCCCCC >Mature Secondary Structure TAKSHSDEYMKSLRNIGVIAHIDAGKTTLTERFLYYSEKIHRMGEVHDGTATMDYLPEE CCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCH QERGITITSACTTCRWKDHDINIIDTPGHVDFTIEVERSLRVLDGAVGVFCAVGGVEPQS HHCCEEEEECCCCCEECCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHEECCCCCCH ETVWRQSQRFNVPKLAFINKMDRVGADFERVLGDIRSRLKANAVAVQIPVGQGETFEAVI HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHH DLVHMRRIDFDASDYGKTYSFSDLSEQELSLAESWRERLIEALADFDDGLLAAYLSGEAV HHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCHH CADQLEAHLRTATLEHGLVPVFAGSALRNVGVQPVMDAVCRYLPGPADVPAPAGVTENGN HHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC IQLAITPDAPLAALVFKVIMEGSRAVALIRLYSGVLHEGTACWNSSRQCFEKAAQLFRLH EEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH AGRRERMEQARAGEIVGVVGFKQARTGDTLTDKGSPVVLENIQQYRPVISLALEPRNAEE CCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCHHHEEEECCCCCHH AEKLDDVLSRVLVEDPTLTLEHDEDSGQRVLSGMGELHLEVVLERLRREYGVSPRSGNPQ HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VVYQETVRMTAEAEAEFDRELGDTRLYGHVAVRLEPLERDAGVDVQTAVDDETIPESWIA EEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCCCCHHHHH EAVQGVKDCLLSGVVKGFPVQDVRVTVTALYRTDGVSSAAGYRMAAVAAVKAALEKAGPV HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCE LLEPIMTVEISVPAEFVGEAISLMGAKGGRVEEMLDQSGVKIVRGIAPMRMLFGFTTQLR EECCEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH SATQGRAALVLTFNRFDMLQ HCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA